RNA–Protein interactions for RNA: ENST00000513942.5

SGCA-210, Transcript of sarcoglycan alpha, humanhuman

TSL 3

Gene SGCA, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-210ENST00000513942 EDC4Q6P2E9 1401 aaKnown RBP20.8■□□□□ 0.92
SGCA-210ENST00000513942 PNPLA7Q6ZV29 1317 aa20.79■□□□□ 0.92
SGCA-210ENST00000513942 HDGFL2Q7Z4V5 671 aaPredicted RBP20.79■□□□□ 0.92
SGCA-210ENST00000513942 TMC1Q8TDI8 760 aa20.79■□□□□ 0.92
SGCA-210ENST00000513942 WASHC2AQ641Q2 1341 aa20.78■□□□□ 0.92
SGCA-210ENST00000513942 SHANK3Q9BYB0 1731 aa20.78■□□□□ 0.92
SGCA-210ENST00000513942 PELP1Q8IZL8 1130 aaKnown RBP20.78■□□□□ 0.92
SGCA-210ENST00000513942 DDX54Q8TDD1 881 aaKnown RBP20.78■□□□□ 0.92
SGCA-210ENST00000513942 A0A1W2PP64 1363 aa20.76■□□□□ 0.91
SGCA-210ENST00000513942 GIGYF1O75420 1035 aaPredicted RBP20.76■□□□□ 0.91
SGCA-210ENST00000513942 DDX10Q13206 875 aaKnown RBP20.76■□□□□ 0.91
SGCA-210ENST00000513942 TFCP2L1Q9NZI6 479 aa20.76■□□□□ 0.91
SGCA-210ENST00000513942 RGPD2P0DJD1 1756 aa20.76■□□□□ 0.91
SGCA-210ENST00000513942 KIF7Q2M1P5 1343 aa20.76■□□□□ 0.91
SGCA-210ENST00000513942 ANKRD36BQ8N2N9 1353 aa20.75■□□□□ 0.91
SGCA-210ENST00000513942 TMF1P82094 1093 aa20.75■□□□□ 0.91
SGCA-210ENST00000513942 SYTL4Q96C24 671 aaPredicted RBP20.75■□□□□ 0.91
SGCA-210ENST00000513942 SLC12A5Q9H2X9 1139 aa20.75■□□□□ 0.91
SGCA-210ENST00000513942 KCNQ4P56696 695 aa20.74■□□□□ 0.91
SGCA-210ENST00000513942 IP6K1Q92551 441 aa20.74■□□□□ 0.91
SGCA-210ENST00000513942 LTV1Q96GA3 475 aaPredicted RBP20.74■□□□□ 0.91
SGCA-210ENST00000513942 CDCA8Q53HL2 280 aa20.73■□□□□ 0.91
SGCA-210ENST00000513942 NLGN2Q8NFZ4 835 aa20.73■□□□□ 0.91
SGCA-210ENST00000513942 TESK2Q96S53 571 aa20.73■□□□□ 0.91
SGCA-210ENST00000513942 TERF2IPQ9NYB0 399 aa20.73■□□□□ 0.91
SGCA-210ENST00000513942 NSD2O96028 1365 aa20.72■□□□□ 0.91
SGCA-210ENST00000513942 PRIM1P49642 420 aaKnown RBP20.71■□□□□ 0.91
SGCA-210ENST00000513942 MEGF6O75095 1541 aa20.69■□□□□ 0.9
SGCA-210ENST00000513942 C5P01031 1676 aa20.68■□□□□ 0.9
SGCA-210ENST00000513942 CCNL1Q9UK58 526 aaPredicted RBP20.68■□□□□ 0.9
SGCA-210ENST00000513942 MAP3K19Q56UN5 1328 aa20.67■□□□□ 0.9
SGCA-210ENST00000513942 YBX3P16989 372 aaKnown RBP eCLIP20.66■□□□□ 0.9
SGCA-210ENST00000513942 HOXC9P31274 260 aa20.66■□□□□ 0.9
SGCA-210ENST00000513942 ZCRB1Q8TBF4 217 aaKnown RBP20.66■□□□□ 0.9
SGCA-210ENST00000513942 CEP350Q5VT06 3117 aa20.65■□□□□ 0.9
SGCA-210ENST00000513942 MSH5O43196 834 aa20.65■□□□□ 0.9
SGCA-210ENST00000513942 GRIN3BO60391 1043 aa20.65■□□□□ 0.9
SGCA-210ENST00000513942 AMPHP49418 695 aa20.65■□□□□ 0.9
SGCA-210ENST00000513942 COG3Q96JB2 828 aa20.65■□□□□ 0.9
SGCA-210ENST00000513942 TAF1LQ8IZX4 1826 aa20.64■□□□□ 0.9
SGCA-210ENST00000513942 COL23A1Q86Y22 540 aaPredicted RBP20.64■□□□□ 0.89
SGCA-210ENST00000513942 PUS7Q96PZ0 661 aaKnown RBP20.64■□□□□ 0.89
SGCA-210ENST00000513942 POLR3GLQ9BT43 218 aa20.63■□□□□ 0.89
SGCA-210ENST00000513942 RTL1A6NKG5 1358 aa20.62■□□□□ 0.89
SGCA-210ENST00000513942 MSL1Q68DK7 614 aa20.62■□□□□ 0.89
SGCA-210ENST00000513942 ATP10DQ9P241 1426 aa20.61■□□□□ 0.89
SGCA-210ENST00000513942 FBLN1P23142 703 aa20.61■□□□□ 0.89
SGCA-210ENST00000513942 ANP32CO43423 234 aa20.6■□□□□ 0.89
SGCA-210ENST00000513942 IFFO2Q5TF58 517 aa20.6■□□□□ 0.89
SGCA-210ENST00000513942 SMG6Q86US8 1419 aaKnown RBP20.59■□□□□ 0.89
SGCA-210ENST00000513942 CGNL1Q0VF96 1302 aa20.58■□□□□ 0.89
SGCA-210ENST00000513942 NBPF6Q5VWK0 638 aa20.57■□□□□ 0.88
SGCA-210ENST00000513942 MIER1Q8N108 512 aa20.57■□□□□ 0.88
SGCA-210ENST00000513942 USHBP1Q8N6Y0 703 aa20.57■□□□□ 0.88
SGCA-210ENST00000513942 NBPF4Q96M43 638 aa20.57■□□□□ 0.88
SGCA-210ENST00000513942 C4BP0C0L5 1744 aa20.56■□□□□ 0.88
SGCA-210ENST00000513942 TOGARAM1Q9Y4F4 1720 aa20.56■□□□□ 0.88
SGCA-210ENST00000513942 ITGB4P16144 1822 aa20.56■□□□□ 0.88
SGCA-210ENST00000513942 RRS1Q15050 365 aaKnown RBP20.56■□□□□ 0.88
SGCA-210ENST00000513942 RAPGEF4Q8WZA2 1011 aa20.56■□□□□ 0.88
SGCA-210ENST00000513942 CD2APQ9Y5K6 639 aa20.56■□□□□ 0.88
SGCA-210ENST00000513942 PALLDQ8WX93 1383 aa20.56■□□□□ 0.88
SGCA-210ENST00000513942 KIF20BQ96Q89 1820 aa20.55■□□□□ 0.88
SGCA-210ENST00000513942 PCDH11XQ9BZA7 1347 aa20.54■□□□□ 0.88
SGCA-210ENST00000513942 PCDH11YQ9BZA8 1340 aa20.54■□□□□ 0.88
SGCA-210ENST00000513942 UBR3Q6ZT12 1888 aa20.54■□□□□ 0.88
SGCA-210ENST00000513942 TATP17735 454 aaPredicted RBP20.54■□□□□ 0.88
SGCA-210ENST00000513942 FLAD1Q8NFF5 587 aa20.54■□□□□ 0.88
SGCA-210ENST00000513942 ADCY9O60503 1353 aa20.54■□□□□ 0.88
SGCA-210ENST00000513942 GPBP1L1Q9HC44 474 aaPredicted RBP20.53■□□□□ 0.88
SGCA-210ENST00000513942 HMGB2P26583 209 aaKnown RBP20.52■□□□□ 0.88
SGCA-210ENST00000513942 PKD1L3Q7Z443 1732 aa20.52■□□□□ 0.88
SGCA-210ENST00000513942 MPRIPQ6WCQ1 1025 aa20.5■□□□□ 0.87
SGCA-210ENST00000513942 GGNBP2Q9H3C7 697 aa20.5■□□□□ 0.87
SGCA-210ENST00000513942 INSRP06213 1382 aa20.49■□□□□ 0.87
SGCA-210ENST00000513942 ZNF526Q8TF50 670 aaPredicted RBP20.49■□□□□ 0.87
SGCA-210ENST00000513942 AK7Q96M32 723 aa20.49■□□□□ 0.87
SGCA-210ENST00000513942 NSD3Q9BZ95 1437 aa20.48■□□□□ 0.87
SGCA-210ENST00000513942 FYB1O15117 783 aa20.48■□□□□ 0.87
SGCA-210ENST00000513942 MAP2P11137 1827 aaKnown RBP20.48■□□□□ 0.87
SGCA-210ENST00000513942 FLT4P35916 1363 aa20.47■□□□□ 0.87
SGCA-210ENST00000513942 CCER2I3L3R5 266 aa20.47■□□□□ 0.87
SGCA-210ENST00000513942 HSP90AB2PQ58FF8 381 aa20.47■□□□□ 0.87
SGCA-210ENST00000513942 AMIGO3Q86WK7 504 aa20.47■□□□□ 0.87
SGCA-210ENST00000513942 IGSF1Q8N6C5 1336 aa20.47■□□□□ 0.87
SGCA-210ENST00000513942 CYP27B1O15528 508 aa20.46■□□□□ 0.87
SGCA-210ENST00000513942 PHF14O94880 888 aa20.46■□□□□ 0.87
SGCA-210ENST00000513942 HSPA6P17066 643 aa20.46■□□□□ 0.87
SGCA-210ENST00000513942 SMARCC1Q92922 1105 aaPredicted RBP20.46■□□□□ 0.87
SGCA-210ENST00000513942 KIF24Q5T7B8 1368 aa20.46■□□□□ 0.87
SGCA-210ENST00000513942 WWC3Q9ULE0 1092 aa20.45■□□□□ 0.86
SGCA-210ENST00000513942 PANK3Q9H999 370 aa20.44■□□□□ 0.86
SGCA-210ENST00000513942 CICQ96RK0 1608 aaPredicted RBP20.43■□□□□ 0.86
SGCA-210ENST00000513942 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.43■□□□□ 0.86
SGCA-210ENST00000513942 SMIM5Q71RC9 77 aa20.42■□□□□ 0.86
SGCA-210ENST00000513942 PRKRIP1Q9H875 184 aaPredicted RBP20.42■□□□□ 0.86
SGCA-210ENST00000513942 ANKRD26Q9UPS8 1709 aa20.41■□□□□ 0.86
SGCA-210ENST00000513942 SSFA2P28290 1259 aa20.41■□□□□ 0.86
SGCA-210ENST00000513942 PIGBQ92521 554 aa20.41■□□□□ 0.86
SGCA-210ENST00000513942 PER1O15534 1290 aaPredicted RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms