RNA–Protein interactions for RNA: ENST00000513448.5

PROM1-215, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-215ENST00000513448 BABAM1Q9NWV8 329 aa11.67□□□□□ -0.54
PROM1-215ENST00000513448 AMPHP49418 695 aa11.67□□□□□ -0.54
PROM1-215ENST00000513448 RBM25P49756 843 aaKnown RBP11.66□□□□□ -0.54
PROM1-215ENST00000513448 ANKRD45Q5TZF3 282 aa11.66□□□□□ -0.54
PROM1-215ENST00000513448 LNPKQ9C0E8 428 aa11.66□□□□□ -0.54
PROM1-215ENST00000513448 CEP170BQ9Y4F5 1589 aaPredicted RBP11.66□□□□□ -0.54
PROM1-215ENST00000513448 PIK3C2AO00443 1686 aa11.66□□□□□ -0.54
PROM1-215ENST00000513448 DCTPP1Q9H773 170 aa11.65□□□□□ -0.54
PROM1-215ENST00000513448 NLRP6P59044 892 aa11.65□□□□□ -0.54
PROM1-215ENST00000513448 GSE1Q14687 1217 aa11.65□□□□□ -0.54
PROM1-215ENST00000513448 MCM10Q7L590 875 aa11.65□□□□□ -0.54
PROM1-215ENST00000513448 SIRT2Q8IXJ6 389 aa11.65□□□□□ -0.54
PROM1-215ENST00000513448 TBC1D2Q9BYX2 928 aa11.65□□□□□ -0.54
PROM1-215ENST00000513448 KCNA6P17658 529 aa11.64□□□□□ -0.55
PROM1-215ENST00000513448 MTHFSDQ2M296 383 aaKnown RBP11.64□□□□□ -0.55
PROM1-215ENST00000513448 EYA1Q99502 592 aa11.64□□□□□ -0.55
PROM1-215ENST00000513448 ANTXR1Q9H6X2 564 aa11.64□□□□□ -0.55
PROM1-215ENST00000513448 RTL1A6NKG5 1358 aa11.64□□□□□ -0.55
PROM1-215ENST00000513448 RGS12O14924 1447 aa11.64□□□□□ -0.55
PROM1-215ENST00000513448 RGPD8O14715 1765 aaPredicted RBP11.64□□□□□ -0.55
PROM1-215ENST00000513448 MFAP1P55081 439 aaKnown RBP11.64□□□□□ -0.55
PROM1-215ENST00000513448 ANKRD44Q8N8A2 993 aa11.64□□□□□ -0.55
PROM1-215ENST00000513448 ANKLE2Q86XL3 938 aa11.63□□□□□ -0.55
PROM1-215ENST00000513448 SNX21Q969T3 373 aa11.63□□□□□ -0.55
PROM1-215ENST00000513448 CCT4P50991 539 aaKnown RBP11.62□□□□□ -0.55
PROM1-215ENST00000513448 TSPYL4Q9UJ04 414 aa11.62□□□□□ -0.55
PROM1-215ENST00000513448 HOXC9P31274 260 aa11.62□□□□□ -0.55
PROM1-215ENST00000513448 CHMP4AQ9BY43 222 aa11.62□□□□□ -0.55
PROM1-215ENST00000513448 BCL11AQ9H165 835 aa11.62□□□□□ -0.55
PROM1-215ENST00000513448 GNAT3A8MTJ3 354 aa11.61□□□□□ -0.55
PROM1-215ENST00000513448 FRAT2O75474 233 aaPredicted RBP11.61□□□□□ -0.55
PROM1-215ENST00000513448 SLC4A2P04920 1241 aa11.61□□□□□ -0.55
PROM1-215ENST00000513448 C1orf115Q9H7X2 142 aa11.61□□□□□ -0.55
PROM1-215ENST00000513448 CHD2O14647 1828 aaKnown RBP11.61□□□□□ -0.55
PROM1-215ENST00000513448 HMMRO75330 724 aa11.6□□□□□ -0.55
PROM1-215ENST00000513448 ABTB2Q8N961 1025 aa11.6□□□□□ -0.55
PROM1-215ENST00000513448 LRRC37A3O60309 1634 aa11.6□□□□□ -0.55
PROM1-215ENST00000513448 ATP10DQ9P241 1426 aa11.6□□□□□ -0.55
PROM1-215ENST00000513448 ZNF142P52746 1687 aaPredicted RBP11.6□□□□□ -0.55
PROM1-215ENST00000513448 SOX12O15370 315 aa11.6□□□□□ -0.55
PROM1-215ENST00000513448 HSCBQ8IWL3 235 aa11.6□□□□□ -0.55
PROM1-215ENST00000513448 PHF8Q9UPP1 1060 aa11.6□□□□□ -0.55
PROM1-215ENST00000513448 MARF1Q9Y4F3 1742 aaKnown RBP11.59□□□□□ -0.55
PROM1-215ENST00000513448 CACNA1FO60840 1977 aa11.59□□□□□ -0.55
PROM1-215ENST00000513448 CDC45O75419 566 aa11.59□□□□□ -0.55
PROM1-215ENST00000513448 CCDC30Q5VVM6 783 aa11.59□□□□□ -0.55
PROM1-215ENST00000513448 CEP85Q6P2H3 762 aa11.59□□□□□ -0.55
PROM1-215ENST00000513448 STK31Q9BXU1 1019 aa11.59□□□□□ -0.55
PROM1-215ENST00000513448 KRT24Q2M2I5 525 aa11.59□□□□□ -0.55
PROM1-215ENST00000513448 PLEKHM2Q8IWE5 1019 aa11.59□□□□□ -0.55
PROM1-215ENST00000513448 KCNH5Q8NCM2 988 aa11.59□□□□□ -0.55
PROM1-215ENST00000513448 CHMP5Q9NZZ3 219 aa11.59□□□□□ -0.55
PROM1-215ENST00000513448 NWD1Q149M9 1564 aa11.58□□□□□ -0.56
PROM1-215ENST00000513448 FOXO3O43524 673 aa11.58□□□□□ -0.56
PROM1-215ENST00000513448 SLKQ9H2G2 1235 aaPredicted RBP11.58□□□□□ -0.56
PROM1-215ENST00000513448 MAP3K5Q99683 1374 aa11.58□□□□□ -0.56
PROM1-215ENST00000513448 SETD1BQ9UPS6 1966 aaKnown RBP11.58□□□□□ -0.56
PROM1-215ENST00000513448 TAF7Q15545 349 aaPredicted RBP11.57□□□□□ -0.56
PROM1-215ENST00000513448 TBC1D9Q6ZT07 1266 aa11.57□□□□□ -0.56
PROM1-215ENST00000513448 IP6K1Q92551 441 aa11.57□□□□□ -0.56
PROM1-215ENST00000513448 MSH6P52701 1360 aa11.57□□□□□ -0.56
PROM1-215ENST00000513448 ADGRL3Q9HAR2 1447 aa11.57□□□□□ -0.56
PROM1-215ENST00000513448 NCOA3Q9Y6Q9 1424 aa11.57□□□□□ -0.56
PROM1-215ENST00000513448 GNAI3P08754 354 aa11.56□□□□□ -0.56
PROM1-215ENST00000513448 TTC22Q5TAA0 569 aa11.56□□□□□ -0.56
PROM1-215ENST00000513448 PHRF1Q9P1Y6 1649 aaKnown RBP11.56□□□□□ -0.56
PROM1-215ENST00000513448 CIZ1Q9ULV3 898 aaPredicted RBP11.56□□□□□ -0.56
PROM1-215ENST00000513448 MEIS3Q99687 375 aa11.55□□□□□ -0.56
PROM1-215ENST00000513448 PXDNLA1KZ92 1463 aa11.55□□□□□ -0.56
PROM1-215ENST00000513448 GNAI2P04899 355 aa11.55□□□□□ -0.56
PROM1-215ENST00000513448 HOXB7P09629 217 aa11.55□□□□□ -0.56
PROM1-215ENST00000513448 CASC1Q6TDU7 716 aa11.55□□□□□ -0.56
PROM1-215ENST00000513448 OSBPL3Q9H4L5 887 aa11.55□□□□□ -0.56
PROM1-215ENST00000513448 MIS18AQ9NYP9 233 aa11.55□□□□□ -0.56
PROM1-215ENST00000513448 CEMIPQ8WUJ3 1361 aa11.54□□□□□ -0.56
PROM1-215ENST00000513448 TRHP20396 242 aaPredicted RBP11.54□□□□□ -0.56
PROM1-215ENST00000513448 FLIIQ13045 1269 aa11.54□□□□□ -0.56
PROM1-215ENST00000513448 IL17REQ8NFR9 667 aa11.54□□□□□ -0.56
PROM1-215ENST00000513448 GSPT1P15170 499 aaKnown RBP11.53□□□□□ -0.56
PROM1-215ENST00000513448 PSME1Q06323 249 aa11.53□□□□□ -0.56
PROM1-215ENST00000513448 NFAT5O94916 1531 aa11.53□□□□□ -0.56
PROM1-215ENST00000513448 DDIT3P35638 169 aa11.53□□□□□ -0.56
PROM1-215ENST00000513448 KIF2CQ99661 725 aa11.53□□□□□ -0.56
PROM1-215ENST00000513448 LTN1O94822 1766 aa11.52□□□□□ -0.56
PROM1-215ENST00000513448 G2E3Q7L622 706 aa11.52□□□□□ -0.56
PROM1-215ENST00000513448 ADAMTSL3P82987 1691 aa11.52□□□□□ -0.57
PROM1-215ENST00000513448 FAM208AQ9UK61 1670 aaKnown RBP11.52□□□□□ -0.57
PROM1-215ENST00000513448 FKBP5Q13451 457 aaPredicted RBP11.52□□□□□ -0.57
PROM1-215ENST00000513448 RABEP1Q15276 862 aa11.52□□□□□ -0.57
PROM1-215ENST00000513448 AMOTQ4VCS5 1084 aa11.52□□□□□ -0.57
PROM1-215ENST00000513448 SLC4A10Q6U841 1118 aa11.52□□□□□ -0.57
PROM1-215ENST00000513448 N4BP2Q86UW6 1770 aaPredicted RBP11.51□□□□□ -0.57
PROM1-215ENST00000513448 PTMSP20962 102 aa11.51□□□□□ -0.57
PROM1-215ENST00000513448 MCM4P33991 863 aa11.51□□□□□ -0.57
PROM1-215ENST00000513448 ESCO1Q5FWF5 840 aa11.51□□□□□ -0.57
PROM1-215ENST00000513448 NUTM2GQ5VZR2 741 aa11.51□□□□□ -0.57
PROM1-215ENST00000513448 NPHP4O75161 1426 aaPredicted RBP11.51□□□□□ -0.57
PROM1-215ENST00000513448 MED1Q15648 1581 aaPredicted RBP11.5□□□□□ -0.57
PROM1-215ENST00000513448 OVOS2A0A0G2JMS6 1433 aa11.5□□□□□ -0.57
PROM1-215ENST00000513448 NCAPD2Q15021 1401 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms