RNA–Protein interactions for RNA: ENST00000513423.1

FGFR4-215, Transcript of fibroblast growth factor receptor 4, human

TSL 2

Gene FGFR4, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR4-215	ENST00000513423	KDR	P35968	1356 aa		18.32	■□□□□ 0.52
FGFR4-215	ENST00000513423	SULT6B1	Q6IMI4	303 aa		18.32	■□□□□ 0.52
FGFR4-215	ENST00000513423	AEBP1	Q8IUX7	1158 aa		18.32	■□□□□ 0.52
FGFR4-215	ENST00000513423	DDX54	Q8TDD1	881 aa	Known RBP	18.32	■□□□□ 0.52
FGFR4-215	ENST00000513423	SHANK3	Q9BYB0	1731 aa		18.32	■□□□□ 0.52
FGFR4-215	ENST00000513423	TRIM37	O94972	964 aa		18.31	■□□□□ 0.52
FGFR4-215	ENST00000513423	PRKRIP1	Q9H875	184 aa	Predicted RBP	18.31	■□□□□ 0.52
FGFR4-215	ENST00000513423	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	18.31	■□□□□ 0.52
FGFR4-215	ENST00000513423	EP400	Q96L91	3159 aa		18.3	■□□□□ 0.52
FGFR4-215	ENST00000513423	CYP27B1	O15528	508 aa		18.29	■□□□□ 0.52
FGFR4-215	ENST00000513423	PKD1L3	Q7Z443	1732 aa		18.29	■□□□□ 0.52
FGFR4-215	ENST00000513423	PLEKHG2	Q9H7P9	1386 aa		18.29	■□□□□ 0.52
FGFR4-215	ENST00000513423	SBF2	Q86WG5	1849 aa		18.28	■□□□□ 0.52
FGFR4-215	ENST00000513423	MYBBP1A	Q9BQG0	1328 aa	Known RBP	18.28	■□□□□ 0.52
FGFR4-215	ENST00000513423	SPG7	Q9UQ90	795 aa		18.28	■□□□□ 0.52
FGFR4-215	ENST00000513423	PCDH11X	Q9BZA7	1347 aa		18.27	■□□□□ 0.52
FGFR4-215	ENST00000513423	PCDH11Y	Q9BZA8	1340 aa		18.27	■□□□□ 0.52
FGFR4-215	ENST00000513423	U2SURP	O15042	1029 aa	Known RBP	18.27	■□□□□ 0.52
FGFR4-215	ENST00000513423	HMOX1	P09601	288 aa		18.27	■□□□□ 0.52
FGFR4-215	ENST00000513423	PTF1A	Q7RTS3	328 aa		18.27	■□□□□ 0.52
FGFR4-215	ENST00000513423	SF3B2	Q13435	895 aa	Known RBP	18.26	■□□□□ 0.51
FGFR4-215	ENST00000513423	BCL11B	Q9C0K0	894 aa	Predicted RBP	18.26	■□□□□ 0.51
FGFR4-215	ENST00000513423	NUDC	Q9Y266	331 aa		18.26	■□□□□ 0.51
FGFR4-215	ENST00000513423	TNS1	Q9HBL0	1735 aa	Known RBP	18.26	■□□□□ 0.51
FGFR4-215	ENST00000513423	KCNQ2	O43526	872 aa		18.25	■□□□□ 0.51
FGFR4-215	ENST00000513423	NKX1-1	Q15270	411 aa	Predicted RBP	18.25	■□□□□ 0.51
FGFR4-215	ENST00000513423	PLEKHO1	Q53GL0	409 aa	Predicted RBP	18.25	■□□□□ 0.51
FGFR4-215	ENST00000513423	DEFB132	Q7Z7B7	95 aa		18.25	■□□□□ 0.51
FGFR4-215	ENST00000513423	AMOT	Q4VCS5	1084 aa		18.24	■□□□□ 0.51
FGFR4-215	ENST00000513423	ACSBG1	Q96GR2	724 aa		18.24	■□□□□ 0.51
FGFR4-215	ENST00000513423	APBA3	O96018	575 aa		18.23	■□□□□ 0.51
FGFR4-215	ENST00000513423	IFNL2	Q8IZJ0	200 aa		18.23	■□□□□ 0.51
FGFR4-215	ENST00000513423	U2AF1L5	P0DN76	240 aa	Predicted RBP	18.22	■□□□□ 0.51
FGFR4-215	ENST00000513423	PHKG2	P15735	406 aa		18.22	■□□□□ 0.51
FGFR4-215	ENST00000513423	BAG6	P46379	1132 aa		18.22	■□□□□ 0.51
FGFR4-215	ENST00000513423	U2AF1	Q01081	240 aa	Known RBP eCLIP	18.22	■□□□□ 0.51
FGFR4-215	ENST00000513423	PRIM1	P49642	420 aa	Known RBP	18.21	■□□□□ 0.51
FGFR4-215	ENST00000513423	EN1	Q05925	392 aa	Predicted RBP	18.21	■□□□□ 0.51
FGFR4-215	ENST00000513423	RSPH6A	Q9H0K4	717 aa		18.21	■□□□□ 0.51
FGFR4-215	ENST00000513423	NHS	Q6T4R5	1651 aa		18.21	■□□□□ 0.51
FGFR4-215	ENST00000513423	ZNF530	Q6P9A1	599 aa	Predicted RBP	18.2	■□□□□ 0.5
FGFR4-215	ENST00000513423	CAMKK2	Q96RR4	588 aa		18.2	■□□□□ 0.5
FGFR4-215	ENST00000513423	PLSCR1	O15162	318 aa		18.19	■□□□□ 0.5
FGFR4-215	ENST00000513423	FCHSD2	O94868	740 aa		18.19	■□□□□ 0.5
FGFR4-215	ENST00000513423	DOT1L	Q8TEK3	1739 aa		18.18	■□□□□ 0.5
FGFR4-215	ENST00000513423	MTHFSD	Q2M296	383 aa	Known RBP	18.18	■□□□□ 0.5
FGFR4-215	ENST00000513423	ANP32C	O43423	234 aa		18.17	■□□□□ 0.5
FGFR4-215	ENST00000513423	PRKAR2B	P31323	418 aa		18.17	■□□□□ 0.5
FGFR4-215	ENST00000513423	EZH2	Q15910	746 aa	Known RBP	18.17	■□□□□ 0.5
FGFR4-215	ENST00000513423	PHACTR3	Q96KR7	559 aa		18.17	■□□□□ 0.5
FGFR4-215	ENST00000513423	TOGARAM1	Q9Y4F4	1720 aa		18.16	■□□□□ 0.5
FGFR4-215	ENST00000513423	HSP90AB1	P08238	724 aa	Known RBP	18.16	■□□□□ 0.5
FGFR4-215	ENST00000513423	AKAP4	Q5JQC9	854 aa		18.16	■□□□□ 0.5
FGFR4-215	ENST00000513423	C1orf141	Q5JVX7	400 aa		18.16	■□□□□ 0.5
FGFR4-215	ENST00000513423	DCAF5	Q96JK2	942 aa		18.16	■□□□□ 0.5
FGFR4-215	ENST00000513423	KAT6B	Q8WYB5	2073 aa		18.15	■□□□□ 0.5
FGFR4-215	ENST00000513423	SYTL4	Q96C24	671 aa	Predicted RBP	18.15	■□□□□ 0.5
FGFR4-215	ENST00000513423	BTAF1	O14981	1849 aa		18.14	■□□□□ 0.5
FGFR4-215	ENST00000513423	PROM2	Q8N271	834 aa		18.14	■□□□□ 0.49
FGFR4-215	ENST00000513423	PLEKHF1	Q96S99	279 aa		18.14	■□□□□ 0.49
FGFR4-215	ENST00000513423	KDM6A	O15550	1401 aa	Predicted RBP	18.14	■□□□□ 0.49
FGFR4-215	ENST00000513423	CCDC184	Q52MB2	194 aa		18.13	■□□□□ 0.49
FGFR4-215	ENST00000513423	MPRIP	Q6WCQ1	1025 aa		18.13	■□□□□ 0.49
FGFR4-215	ENST00000513423	PIGB	Q92521	554 aa		18.13	■□□□□ 0.49
FGFR4-215	ENST00000513423	ITGB4	P16144	1822 aa		18.12	■□□□□ 0.49
FGFR4-215	ENST00000513423	ERVV-2	B6SEH9	535 aa		18.12	■□□□□ 0.49
FGFR4-215	ENST00000513423	GAS2L2	Q8NHY3	880 aa		18.12	■□□□□ 0.49
FGFR4-215	ENST00000513423	RGPD3	A6NKT7	1758 aa	Predicted RBP	18.12	■□□□□ 0.49
FGFR4-215	ENST00000513423	RGPD4	Q7Z3J3	1758 aa		18.12	■□□□□ 0.49
FGFR4-215	ENST00000513423	LGR6	Q9HBX8	967 aa		18.11	■□□□□ 0.49
FGFR4-215	ENST00000513423	TXNRD1	Q16881	649 aa		18.1	■□□□□ 0.49
FGFR4-215	ENST00000513423	PNN	Q9H307	717 aa	Known RBP	18.1	■□□□□ 0.49
FGFR4-215	ENST00000513423	RNMT	O43148	476 aa	Known RBP	18.09	■□□□□ 0.49
FGFR4-215	ENST00000513423	TMOD3	Q9NYL9	352 aa		18.09	■□□□□ 0.49
FGFR4-215	ENST00000513423	ADAMTS8	Q9UP79	889 aa		18.09	■□□□□ 0.49
FGFR4-215	ENST00000513423	SCN11A	Q9UI33	1791 aa		18.09	■□□□□ 0.49
FGFR4-215	ENST00000513423	RREB1	Q92766	1687 aa		18.09	■□□□□ 0.49
FGFR4-215	ENST00000513423	GNAT3	A8MTJ3	354 aa		18.08	■□□□□ 0.48
FGFR4-215	ENST00000513423	CABP4	P57796	275 aa		18.08	■□□□□ 0.48
FGFR4-215	ENST00000513423	IL17RE	Q8NFR9	667 aa		18.08	■□□□□ 0.48
FGFR4-215	ENST00000513423	ADAMTS7	Q9UKP4	1686 aa		18.08	■□□□□ 0.48
FGFR4-215	ENST00000513423	MAP3K5	Q99683	1374 aa		18.07	■□□□□ 0.48
FGFR4-215	ENST00000513423	WDR43	Q15061	677 aa	Known RBP eCLIP	18.07	■□□□□ 0.48
FGFR4-215	ENST00000513423	NFATC2IP	Q8NCF5	419 aa		18.06	■□□□□ 0.48
FGFR4-215	ENST00000513423	ASAP1	Q9ULH1	1129 aa		18.06	■□□□□ 0.48
FGFR4-215	ENST00000513423	NUP188	Q5SRE5	1749 aa		18.06	■□□□□ 0.48
FGFR4-215	ENST00000513423	NEFM	P07197	916 aa		18.05	■□□□□ 0.48
FGFR4-215	ENST00000513423	SMARCC1	Q92922	1105 aa	Predicted RBP	18.05	■□□□□ 0.48
FGFR4-215	ENST00000513423	SLC52A2	Q9HAB3	445 aa		18.05	■□□□□ 0.48
FGFR4-215	ENST00000513423	ATG3	Q9NT62	314 aa		18.05	■□□□□ 0.48
FGFR4-215	ENST00000513423	LRRC4B	Q9NT99	713 aa		18.05	■□□□□ 0.48
FGFR4-215	ENST00000513423	LY75	O60449	1722 aa		18.05	■□□□□ 0.48
FGFR4-215	ENST00000513423	NFE2L2	Q16236	605 aa		18.04	■□□□□ 0.48
FGFR4-215	ENST00000513423	SLC27A3	Q5K4L6	730 aa		18.04	■□□□□ 0.48
FGFR4-215	ENST00000513423	PNISR	Q8TF01	805 aa	Known RBP	18.04	■□□□□ 0.48
FGFR4-215	ENST00000513423	VIRMA	Q69YN4	1812 aa	Known RBP	18.04	■□□□□ 0.48
FGFR4-215	ENST00000513423	CEMIP	Q8WUJ3	1361 aa		18.04	■□□□□ 0.48
FGFR4-215	ENST00000513423	PALLD	Q8WX93	1383 aa		18.04	■□□□□ 0.48
FGFR4-215	ENST00000513423	MRC1	P22897	1456 aa		18.03	■□□□□ 0.48
FGFR4-215	ENST00000513423	HTATSF1	O43719	755 aa	Known RBP	18.03	■□□□□ 0.48

Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms