RNA–Protein interactions for RNA: ENST00000513205.5

PPARGC1A-211, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 1,432 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-211ENST00000513205 U2AF1L5P0DN76 240 aaPredicted RBP11.19□□□□□ -0.62
PPARGC1A-211ENST00000513205 TNNT2P45379 298 aaPredicted RBP11.19□□□□□ -0.62
PPARGC1A-211ENST00000513205 U2AF1Q01081 240 aaKnown RBP eCLIP11.19□□□□□ -0.62
PPARGC1A-211ENST00000513205 WWC1Q8IX03 1113 aa11.19□□□□□ -0.62
PPARGC1A-211ENST00000513205 SLC26A8Q96RN1 970 aa11.19□□□□□ -0.62
PPARGC1A-211ENST00000513205 IL16Q14005 1332 aa11.19□□□□□ -0.62
PPARGC1A-211ENST00000513205 MAPK8IP3Q9UPT6 1336 aa11.19□□□□□ -0.62
PPARGC1A-211ENST00000513205 KIF24Q5T7B8 1368 aa11.19□□□□□ -0.62
PPARGC1A-211ENST00000513205 OVOS2A0A0J9YW53 1432 aa11.19□□□□□ -0.62
PPARGC1A-211ENST00000513205 OVOS2Q6IE36 1432 aa11.19□□□□□ -0.62
PPARGC1A-211ENST00000513205 NWD1Q149M9 1564 aa11.19□□□□□ -0.62
PPARGC1A-211ENST00000513205 USP54Q70EL1 1684 aa11.19□□□□□ -0.62
PPARGC1A-211ENST00000513205 FMN2Q9NZ56 1722 aa11.19□□□□□ -0.62
PPARGC1A-211ENST00000513205 CHD2O14647 1828 aaKnown RBP11.19□□□□□ -0.62
PPARGC1A-211ENST00000513205 KIF3CO14782 793 aa11.18□□□□□ -0.62
PPARGC1A-211ENST00000513205 TCP11L2Q8N4U5 519 aa11.18□□□□□ -0.62
PPARGC1A-211ENST00000513205 MFRPQ9BY79 579 aa11.18□□□□□ -0.62
PPARGC1A-211ENST00000513205 MYH16Q9H6N6 1097 aa11.18□□□□□ -0.62
PPARGC1A-211ENST00000513205 STK24Q9Y6E0 443 aa11.18□□□□□ -0.62
PPARGC1A-211ENST00000513205 PRR36Q9H6K5 1346 aa11.18□□□□□ -0.62
PPARGC1A-211ENST00000513205 SSH2Q76I76 1423 aa11.18□□□□□ -0.62
PPARGC1A-211ENST00000513205 NPHP4O75161 1426 aaPredicted RBP11.18□□□□□ -0.62
PPARGC1A-211ENST00000513205 USP31Q70CQ4 1352 aa11.18□□□□□ -0.62
PPARGC1A-211ENST00000513205 CALD1Q05682 793 aaKnown RBP11.18□□□□□ -0.62
PPARGC1A-211ENST00000513205 AAMPQ13685 434 aa11.18□□□□□ -0.62
PPARGC1A-211ENST00000513205 CCDC146Q8IYE0 955 aa11.18□□□□□ -0.62
PPARGC1A-211ENST00000513205 CDCA7LQ96GN5 454 aa11.18□□□□□ -0.62
PPARGC1A-211ENST00000513205 SALL2Q9Y467 1007 aaPredicted RBP11.18□□□□□ -0.62
PPARGC1A-211ENST00000513205 ADGRL3Q9HAR2 1447 aa11.17□□□□□ -0.62
PPARGC1A-211ENST00000513205 ACEP12821 1306 aa11.17□□□□□ -0.62
PPARGC1A-211ENST00000513205 TTC21BQ7Z4L5 1316 aa11.17□□□□□ -0.62
PPARGC1A-211ENST00000513205 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.16□□□□□ -0.626e-11■■■□□ 18.1
PPARGC1A-211ENST00000513205 CCDC136Q96JN2 1154 aa11.16□□□□□ -0.62
PPARGC1A-211ENST00000513205 PLEKHF1Q96S99 279 aa11.16□□□□□ -0.62
PPARGC1A-211ENST00000513205 POLKQ9UBT6 870 aa11.16□□□□□ -0.62
PPARGC1A-211ENST00000513205 NCOA3Q9Y6Q9 1424 aa11.15□□□□□ -0.62
PPARGC1A-211ENST00000513205 C2orf72A6NCS6 295 aa11.15□□□□□ -0.62
PPARGC1A-211ENST00000513205 LSM11P83369 360 aaKnown RBP eCLIP11.15□□□□□ -0.62
PPARGC1A-211ENST00000513205 LMOD3Q0VAK6 560 aa11.15□□□□□ -0.62
PPARGC1A-211ENST00000513205 U2SURPO15042 1029 aaKnown RBP11.14□□□□□ -0.63
PPARGC1A-211ENST00000513205 KCNA6P17658 529 aa11.13□□□□□ -0.63
PPARGC1A-211ENST00000513205 IRX6P78412 446 aaPredicted RBP11.13□□□□□ -0.63
PPARGC1A-211ENST00000513205 ZNF428Q96B54 188 aa11.13□□□□□ -0.63
PPARGC1A-211ENST00000513205 MS4A1P11836 297 aa11.12□□□□□ -0.63
PPARGC1A-211ENST00000513205 TMPOP42166 694 aaKnown RBP11.12□□□□□ -0.63
PPARGC1A-211ENST00000513205 PDE3AQ14432 1141 aa11.12□□□□□ -0.63
PPARGC1A-211ENST00000513205 NME9Q86XW9 330 aa11.12□□□□□ -0.63
PPARGC1A-211ENST00000513205 FBXO41Q8TF61 875 aa11.12□□□□□ -0.63
PPARGC1A-211ENST00000513205 MAP2P11137 1827 aaKnown RBP11.12□□□□□ -0.63
PPARGC1A-211ENST00000513205 STK25O00506 426 aa11.11□□□□□ -0.63
PPARGC1A-211ENST00000513205 SLC34A2O95436 690 aa11.11□□□□□ -0.63
PPARGC1A-211ENST00000513205 NUDT7P0C024 238 aa11.11□□□□□ -0.63
PPARGC1A-211ENST00000513205 NGDNQ8NEJ9 315 aaKnown RBP11.11□□□□□ -0.63
PPARGC1A-211ENST00000513205 RSPH6AQ9H0K4 717 aa11.11□□□□□ -0.63
PPARGC1A-211ENST00000513205 DCCP43146 1447 aa11.11□□□□□ -0.63
PPARGC1A-211ENST00000513205 RTL1A6NKG5 1358 aa11.11□□□□□ -0.63
PPARGC1A-211ENST00000513205 IL13P35225 146 aa11.1□□□□□ -0.63
PPARGC1A-211ENST00000513205 SBNO1A3KN83 1393 aa11.1□□□□□ -0.63
PPARGC1A-211ENST00000513205 FLT4P35916 1363 aa11.1□□□□□ -0.63
PPARGC1A-211ENST00000513205 HAP1P54257 671 aaPredicted RBP11.09□□□□□ -0.63
PPARGC1A-211ENST00000513205 KIF1AQ12756 1690 aa11.09□□□□□ -0.63
PPARGC1A-211ENST00000513205 ARHGEF10O15013 1369 aa11.09□□□□□ -0.63
PPARGC1A-211ENST00000513205 PBX2P40425 430 aa11.09□□□□□ -0.63
PPARGC1A-211ENST00000513205 POTEEQ6S8J3 1075 aa11.09□□□□□ -0.63
PPARGC1A-211ENST00000513205 LHX6Q9UPM6 363 aa11.09□□□□□ -0.63
PPARGC1A-211ENST00000513205 PIK3C2AO00443 1686 aa11.08□□□□□ -0.64
PPARGC1A-211ENST00000513205 NFE2L2Q16236 605 aa11.08□□□□□ -0.64
PPARGC1A-211ENST00000513205 B4GALNT3Q6L9W6 998 aa11.08□□□□□ -0.64
PPARGC1A-211ENST00000513205 PCDHGA4Q9Y5G9 962 aa11.08□□□□□ -0.64
PPARGC1A-211ENST00000513205 EMILIN1Q9Y6C2 1016 aa11.08□□□□□ -0.64
PPARGC1A-211ENST00000513205 RGPD1P0DJD0 1748 aa11.07□□□□□ -0.64
PPARGC1A-211ENST00000513205 PRKAR2BP31323 418 aa11.07□□□□□ -0.64
PPARGC1A-211ENST00000513205 RIPK4P57078 832 aa11.07□□□□□ -0.64
PPARGC1A-211ENST00000513205 PHRF1Q9P1Y6 1649 aaKnown RBP11.06□□□□□ -0.64
PPARGC1A-211ENST00000513205 MST1RQ04912 1400 aa11.06□□□□□ -0.64
PPARGC1A-211ENST00000513205 PPM1GO15355 546 aaPredicted RBP11.06□□□□□ -0.64
PPARGC1A-211ENST00000513205 NEUROD2Q15784 382 aa11.06□□□□□ -0.64
PPARGC1A-211ENST00000513205 TSHZ2Q9NRE2 1034 aa11.06□□□□□ -0.64
PPARGC1A-211ENST00000513205 KIF16BQ96L93 1317 aa11.05□□□□□ -0.64
PPARGC1A-211ENST00000513205 NCKAP5LQ9HCH0 1330 aa11.05□□□□□ -0.64
PPARGC1A-211ENST00000513205 KDRP35968 1356 aa11.05□□□□□ -0.64
PPARGC1A-211ENST00000513205 SENP3-EIF4A1A0A087X0R7 540 aa11.05□□□□□ -0.64
PPARGC1A-211ENST00000513205 ECM2O94769 699 aaPredicted RBP11.05□□□□□ -0.64
PPARGC1A-211ENST00000513205 RARSP54136 660 aaKnown RBP11.05□□□□□ -0.64
PPARGC1A-211ENST00000513205 ALDH1L2Q3SY69 923 aa11.05□□□□□ -0.64
PPARGC1A-211ENST00000513205 KCNH5Q8NCM2 988 aa11.05□□□□□ -0.64
PPARGC1A-211ENST00000513205 EXOC6Q8TAG9 804 aa11.05□□□□□ -0.64
PPARGC1A-211ENST00000513205 IFT57Q9NWB7 429 aa11.05□□□□□ -0.64
PPARGC1A-211ENST00000513205 FANCIQ9NVI1 1328 aa11.05□□□□□ -0.64
PPARGC1A-211ENST00000513205 CANXP27824 592 aaKnown RBP11.04□□□□□ -0.64
PPARGC1A-211ENST00000513205 BRPF1P55201 1214 aaPredicted RBP11.04□□□□□ -0.64
PPARGC1A-211ENST00000513205 GNAI1P63096 354 aa11.04□□□□□ -0.64
PPARGC1A-211ENST00000513205 CENPQQ7L2Z9 268 aaPredicted RBP11.04□□□□□ -0.64
PPARGC1A-211ENST00000513205 AXIN2Q9Y2T1 843 aa11.04□□□□□ -0.64
PPARGC1A-211ENST00000513205 RRP7AQ9Y3A4 280 aaKnown RBP11.04□□□□□ -0.64
PPARGC1A-211ENST00000513205 RGPD8O14715 1765 aaPredicted RBP11.04□□□□□ -0.64
PPARGC1A-211ENST00000513205 PMFBP1Q8TBY8 1022 aa11.03□□□□□ -0.64
PPARGC1A-211ENST00000513205 CHMP4BQ9H444 224 aaKnown RBP11.03□□□□□ -0.64
PPARGC1A-211ENST00000513205 PEAK1Q9H792 1746 aa11.02□□□□□ -0.64
PPARGC1A-211ENST00000513205 TCERG1O14776 1098 aaKnown RBP11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms