RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 RPAP2Q8IXW5 612 aaPredicted RBP14.29□□□□□ -0.12
SNX25-205ENST00000512853 TUBGCP6Q96RT7 1819 aa14.28□□□□□ -0.12
SNX25-205ENST00000512853 PPP6R1Q9UPN7 881 aa14.28□□□□□ -0.12
SNX25-205ENST00000512853 RTL1A6NKG5 1358 aa14.28□□□□□ -0.12
SNX25-205ENST00000512853 TOPAZ1Q8N9V7 1692 aa14.28□□□□□ -0.12
SNX25-205ENST00000512853 CEP85Q6P2H3 762 aa14.27□□□□□ -0.12
SNX25-205ENST00000512853 OSCARQ8IYS5 282 aa14.27□□□□□ -0.12
SNX25-205ENST00000512853 COG3Q96JB2 828 aa14.27□□□□□ -0.12
SNX25-205ENST00000512853 ZRANB1Q9UGI0 708 aa14.27□□□□□ -0.12
SNX25-205ENST00000512853 MSH6P52701 1360 aa14.27□□□□□ -0.12
SNX25-205ENST00000512853 PTPRCP08575 1304 aa14.27□□□□□ -0.13
SNX25-205ENST00000512853 FAM83GA6ND36 823 aa14.27□□□□□ -0.13
SNX25-205ENST00000512853 CWC22Q9HCG8 908 aaKnown RBP14.27□□□□□ -0.13
SNX25-205ENST00000512853 STAG3Q9UJ98 1225 aa14.27□□□□□ -0.13
SNX25-205ENST00000512853 DDX49Q9Y6V7 483 aaKnown RBP14.27□□□□□ -0.13
SNX25-205ENST00000512853 NASPP49321 788 aaPredicted RBP14.26□□□□□ -0.13
SNX25-205ENST00000512853 CHL1O00533 1208 aa14.25□□□□□ -0.13
SNX25-205ENST00000512853 SIRT1Q96EB6 747 aa14.25□□□□□ -0.13
SNX25-205ENST00000512853 PEAK1Q9H792 1746 aa14.25□□□□□ -0.13
SNX25-205ENST00000512853 SDSP20132 328 aa14.25□□□□□ -0.13
SNX25-205ENST00000512853 CASC1Q6TDU7 716 aa14.25□□□□□ -0.13
SNX25-205ENST00000512853 C16orf71Q8IYS4 520 aaPredicted RBP14.25□□□□□ -0.13
SNX25-205ENST00000512853 NUDT16Q96DE0 195 aaKnown RBP14.25□□□□□ -0.13
SNX25-205ENST00000512853 LMBRD1Q9NUN5 540 aa14.25□□□□□ -0.13
SNX25-205ENST00000512853 OVOS2A0A0J9YW53 1432 aa14.24□□□□□ -0.13
SNX25-205ENST00000512853 OVOS2Q6IE36 1432 aa14.24□□□□□ -0.13
SNX25-205ENST00000512853 DCTN1Q14203 1278 aa14.24□□□□□ -0.13
SNX25-205ENST00000512853 RRS1Q15050 365 aaKnown RBP14.24□□□□□ -0.13
SNX25-205ENST00000512853 OTUD7AQ8TE49 926 aaPredicted RBP14.24□□□□□ -0.13
SNX25-205ENST00000512853 METP08581 1390 aa14.24□□□□□ -0.13
SNX25-205ENST00000512853 N4BP2Q86UW6 1770 aaPredicted RBP14.23□□□□□ -0.13
SNX25-205ENST00000512853 RRP9O43818 475 aaKnown RBP14.23□□□□□ -0.13
SNX25-205ENST00000512853 CRB1P82279 1406 aa14.23□□□□□ -0.13
SNX25-205ENST00000512853 ST18O60284 1047 aa14.23□□□□□ -0.13
SNX25-205ENST00000512853 REC8O95072 547 aa14.23□□□□□ -0.13
SNX25-205ENST00000512853 TPM2P07951 284 aa14.23□□□□□ -0.13
SNX25-205ENST00000512853 MCTP1Q6DN14 999 aa14.23□□□□□ -0.13
SNX25-205ENST00000512853 ZSCAN30Q86W11 494 aa14.23□□□□□ -0.13
SNX25-205ENST00000512853 CCDC61Q9Y6R9 512 aa14.23□□□□□ -0.13
SNX25-205ENST00000512853 FMN2Q9NZ56 1722 aa14.23□□□□□ -0.13
SNX25-205ENST00000512853 EIF4A2Q14240 407 aaKnown RBP14.22□□□□□ -0.13
SNX25-205ENST00000512853 OSBPL3Q9H4L5 887 aa14.22□□□□□ -0.13
SNX25-205ENST00000512853 HS1BP3Q53T59 392 aa14.21□□□□□ -0.13
SNX25-205ENST00000512853 ANP32BQ92688 251 aaKnown RBP14.21□□□□□ -0.13
SNX25-205ENST00000512853 ZSCAN23Q3MJ62 389 aa14.21□□□□□ -0.14
SNX25-205ENST00000512853 AEBP1Q8IUX7 1158 aa14.21□□□□□ -0.14
SNX25-205ENST00000512853 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.21□□□□□ -0.14
SNX25-205ENST00000512853 MEIS3Q99687 375 aa14.21□□□□□ -0.14
SNX25-205ENST00000512853 LRRC37A3O60309 1634 aa14.2□□□□□ -0.14
SNX25-205ENST00000512853 FAM208AQ9UK61 1670 aaKnown RBP14.2□□□□□ -0.14
SNX25-205ENST00000512853 ERC2O15083 957 aa14.2□□□□□ -0.14
SNX25-205ENST00000512853 SMARCA5O60264 1052 aaPredicted RBP14.2□□□□□ -0.14
SNX25-205ENST00000512853 KRT24Q2M2I5 525 aa14.2□□□□□ -0.14
SNX25-205ENST00000512853 PRR36Q9H6K5 1346 aa14.2□□□□□ -0.14
SNX25-205ENST00000512853 HMMRO75330 724 aa14.19□□□□□ -0.14
SNX25-205ENST00000512853 PKP1Q13835 747 aa14.19□□□□□ -0.14
SNX25-205ENST00000512853 ZDHHC9Q9Y397 364 aa14.19□□□□□ -0.14
SNX25-205ENST00000512853 ARHGEF10O15013 1369 aa14.19□□□□□ -0.14
SNX25-205ENST00000512853 SULT6B1Q6IMI4 303 aa14.19□□□□□ -0.14
SNX25-205ENST00000512853 CAVIN1Q6NZI2 390 aaKnown RBP14.19□□□□□ -0.14
SNX25-205ENST00000512853 XRN1Q8IZH2 1706 aaKnown RBP14.19□□□□□ -0.14
SNX25-205ENST00000512853 PDLIM2Q96JY6 352 aa14.19□□□□□ -0.14
SNX25-205ENST00000512853 DIP2BQ9P265 1576 aa14.18□□□□□ -0.14
SNX25-205ENST00000512853 USP31Q70CQ4 1352 aa14.18□□□□□ -0.14
SNX25-205ENST00000512853 ZGPATQ8N5A5 531 aaKnown RBP14.18□□□□□ -0.14
SNX25-205ENST00000512853 SALL3Q9BXA9 1300 aa14.17□□□□□ -0.14
SNX25-205ENST00000512853 NCKAP5LQ9HCH0 1330 aa14.17□□□□□ -0.14
SNX25-205ENST00000512853 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.17□□□□□ -0.14
SNX25-205ENST00000512853 TTC21BQ7Z4L5 1316 aa14.17□□□□□ -0.14
SNX25-205ENST00000512853 OFD1O75665 1012 aa14.17□□□□□ -0.14
SNX25-205ENST00000512853 HSP90AA2PQ14568 343 aaPredicted RBP14.17□□□□□ -0.14
SNX25-205ENST00000512853 TXNDC2Q86VQ3 553 aa14.17□□□□□ -0.14
SNX25-205ENST00000512853 RBSNQ9H1K0 784 aa14.17□□□□□ -0.14
SNX25-205ENST00000512853 SSH2Q76I76 1423 aa14.16□□□□□ -0.14
SNX25-205ENST00000512853 MCM2P49736 904 aa14.16□□□□□ -0.14
SNX25-205ENST00000512853 CCT4P50991 539 aaKnown RBP14.16□□□□□ -0.14
SNX25-205ENST00000512853 TERF1P54274 439 aa14.16□□□□□ -0.14
SNX25-205ENST00000512853 PDE1AP54750 535 aa14.16□□□□□ -0.14
SNX25-205ENST00000512853 MCM10Q7L590 875 aa14.16□□□□□ -0.14
SNX25-205ENST00000512853 GPT2Q8TD30 523 aa14.16□□□□□ -0.14
SNX25-205ENST00000512853 IL17RAQ96F46 866 aa14.16□□□□□ -0.14
SNX25-205ENST00000512853 USP6P35125 1406 aa14.16□□□□□ -0.14
SNX25-205ENST00000512853 RIMS1Q86UR5 1692 aaKnown RBP14.16□□□□□ -0.14
SNX25-205ENST00000512853 GLIPR1L2Q4G1C9 344 aa14.15□□□□□ -0.14
SNX25-205ENST00000512853 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.15□□□□□ -0.14
SNX25-205ENST00000512853 CUL4AQ13619 759 aa14.15□□□□□ -0.14
SNX25-205ENST00000512853 CACNA1FO60840 1977 aa14.14□□□□□ -0.15
SNX25-205ENST00000512853 PRPF40AO75400 957 aaKnown RBP14.14□□□□□ -0.15
SNX25-205ENST00000512853 NCLP19338 710 aaKnown RBP14.14□□□□□ -0.15
SNX25-205ENST00000512853 MSNP26038 577 aaKnown RBP14.14□□□□□ -0.15
SNX25-205ENST00000512853 UBR1Q8IWV7 1749 aa14.14□□□□□ -0.15
SNX25-205ENST00000512853 MBD3O95983 291 aa14.13□□□□□ -0.15
SNX25-205ENST00000512853 SLC4A2P04920 1241 aa14.13□□□□□ -0.15
SNX25-205ENST00000512853 PRIM1P49642 420 aaKnown RBP14.13□□□□□ -0.15
SNX25-205ENST00000512853 LRSAM1Q6UWE0 723 aa14.13□□□□□ -0.15
SNX25-205ENST00000512853 KIAA1211Q6ZU35 1233 aa14.13□□□□□ -0.15
SNX25-205ENST00000512853 ESYT1Q9BSJ8 1104 aa14.13□□□□□ -0.15
SNX25-205ENST00000512853 NOL7Q9UMY1 257 aaKnown RBP14.13□□□□□ -0.15
SNX25-205ENST00000512853 ROBO2Q9HCK4 1378 aa14.13□□□□□ -0.15
SNX25-205ENST00000512853 PLEKHG3A1L390 1219 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms