RNA–Protein interactions for RNA: ENST00000512606.5

TMEM173-211, Transcript of transmembrane protein 173, humanhuman

TSL 1 (best)

Gene TMEM173, Length 838 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM173-211ENST00000512606 ITGB4P16144 1822 aa16.5■□□□□ 0.23
TMEM173-211ENST00000512606 NME9Q86XW9 330 aa16.5■□□□□ 0.23
TMEM173-211ENST00000512606 TFCP2L1Q9NZI6 479 aa16.5■□□□□ 0.23
TMEM173-211ENST00000512606 C4BP0C0L5 1744 aa16.49■□□□□ 0.23
TMEM173-211ENST00000512606 ROCK2O75116 1388 aaKnown RBP16.49■□□□□ 0.23
TMEM173-211ENST00000512606 KCNQ4P56696 695 aa16.48■□□□□ 0.23
TMEM173-211ENST00000512606 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.48■□□□□ 0.23
TMEM173-211ENST00000512606 KIAA1551Q9HCM1 1747 aa16.48■□□□□ 0.23
TMEM173-211ENST00000512606 KIF13BQ9NQT8 1826 aa16.47■□□□□ 0.23
TMEM173-211ENST00000512606 HSPA6P17066 643 aa16.47■□□□□ 0.23
TMEM173-211ENST00000512606 MAP2P11137 1827 aaKnown RBP16.47■□□□□ 0.23
TMEM173-211ENST00000512606 PKD1L3Q7Z443 1732 aa16.45■□□□□ 0.22
TMEM173-211ENST00000512606 COL23A1Q86Y22 540 aaPredicted RBP16.45■□□□□ 0.22
TMEM173-211ENST00000512606 L3MBTL2Q969R5 705 aa16.45■□□□□ 0.22
TMEM173-211ENST00000512606 A0A1W2PP64 1363 aa16.45■□□□□ 0.22
TMEM173-211ENST00000512606 PRIM1P49642 420 aaKnown RBP16.44■□□□□ 0.22
TMEM173-211ENST00000512606 DDX54Q8TDD1 881 aaKnown RBP16.44■□□□□ 0.22
TMEM173-211ENST00000512606 IP6K1Q92551 441 aa16.44■□□□□ 0.22
TMEM173-211ENST00000512606 GPBP1L1Q9HC44 474 aaPredicted RBP16.44■□□□□ 0.22
TMEM173-211ENST00000512606 CCNL1Q9UK58 526 aaPredicted RBP16.44■□□□□ 0.22
TMEM173-211ENST00000512606 CD2APQ9Y5K6 639 aa16.43■□□□□ 0.22
TMEM173-211ENST00000512606 WDR90Q96KV7 1748 aa16.42■□□□□ 0.22
TMEM173-211ENST00000512606 BRCA1P38398 1863 aaKnown RBP16.42■□□□□ 0.22
TMEM173-211ENST00000512606 USP47Q96K76 1375 aa16.42■□□□□ 0.22
TMEM173-211ENST00000512606 MSL1Q68DK7 614 aa16.42■□□□□ 0.22
TMEM173-211ENST00000512606 SYTL4Q96C24 671 aaPredicted RBP16.42■□□□□ 0.22
TMEM173-211ENST00000512606 RTL1A6NKG5 1358 aa16.4■□□□□ 0.22
TMEM173-211ENST00000512606 HDGFL2Q7Z4V5 671 aaPredicted RBP16.39■□□□□ 0.21
TMEM173-211ENST00000512606 KIF20BQ96Q89 1820 aa16.39■□□□□ 0.21
TMEM173-211ENST00000512606 MAP3K19Q56UN5 1328 aa16.39■□□□□ 0.21
TMEM173-211ENST00000512606 KIF3CO14782 793 aa16.38■□□□□ 0.21
TMEM173-211ENST00000512606 ZCRB1Q8TBF4 217 aaKnown RBP16.38■□□□□ 0.21
TMEM173-211ENST00000512606 N4BP2Q86UW6 1770 aaPredicted RBP16.38■□□□□ 0.21
TMEM173-211ENST00000512606 HOXC9P31274 260 aa16.37■□□□□ 0.21
TMEM173-211ENST00000512606 LTV1Q96GA3 475 aaPredicted RBP16.37■□□□□ 0.21
TMEM173-211ENST00000512606 PALLDQ8WX93 1383 aa16.37■□□□□ 0.21
TMEM173-211ENST00000512606 MSH5O43196 834 aa16.36■□□□□ 0.21
TMEM173-211ENST00000512606 ZNF526Q8TF50 670 aaPredicted RBP16.36■□□□□ 0.21
TMEM173-211ENST00000512606 SLC12A5Q9H2X9 1139 aa16.36■□□□□ 0.21
TMEM173-211ENST00000512606 IGSF1Q8N6C5 1336 aa16.36■□□□□ 0.21
TMEM173-211ENST00000512606 ANKRD26Q9UPS8 1709 aa16.36■□□□□ 0.21
TMEM173-211ENST00000512606 NSD3Q9BZ95 1437 aa16.36■□□□□ 0.21
TMEM173-211ENST00000512606 ARFGEF1Q9Y6D6 1849 aa16.35■□□□□ 0.21
TMEM173-211ENST00000512606 FLAD1Q8NFF5 587 aa16.35■□□□□ 0.21
TMEM173-211ENST00000512606 CGNL1Q0VF96 1302 aa16.35■□□□□ 0.21
TMEM173-211ENST00000512606 TERF2IPQ9NYB0 399 aa16.34■□□□□ 0.21
TMEM173-211ENST00000512606 AMIGO3Q86WK7 504 aa16.33■□□□□ 0.2
TMEM173-211ENST00000512606 TMC1Q8TDI8 760 aa16.33■□□□□ 0.2
TMEM173-211ENST00000512606 PUS7Q96PZ0 661 aaKnown RBP16.33■□□□□ 0.2
TMEM173-211ENST00000512606 PXDNLA1KZ92 1463 aa16.32■□□□□ 0.2
TMEM173-211ENST00000512606 NCAPD2Q15021 1401 aa16.32■□□□□ 0.2
TMEM173-211ENST00000512606 ZNF831Q5JPB2 1677 aa16.32■□□□□ 0.2
TMEM173-211ENST00000512606 COL5A3P25940 1745 aaPredicted RBP16.31■□□□□ 0.2
TMEM173-211ENST00000512606 PCDH11XQ9BZA7 1347 aa16.31■□□□□ 0.2
TMEM173-211ENST00000512606 PCDH11YQ9BZA8 1340 aa16.31■□□□□ 0.2
TMEM173-211ENST00000512606 HMGB2P26583 209 aaKnown RBP16.31■□□□□ 0.2
TMEM173-211ENST00000512606 C4AP0C0L4 1744 aa16.31■□□□□ 0.2
TMEM173-211ENST00000512606 SMG6Q86US8 1419 aaKnown RBP16.3■□□□□ 0.2
TMEM173-211ENST00000512606 APLP1P51693 650 aa16.3■□□□□ 0.2
TMEM173-211ENST00000512606 NBPF6Q5VWK0 638 aa16.3■□□□□ 0.2
TMEM173-211ENST00000512606 NBPF4Q96M43 638 aa16.3■□□□□ 0.2
TMEM173-211ENST00000512606 AMPHP49418 695 aa16.29■□□□□ 0.2
TMEM173-211ENST00000512606 COG3Q96JB2 828 aa16.29■□□□□ 0.2
TMEM173-211ENST00000512606 SIN3AQ96ST3 1273 aa16.29■□□□□ 0.2
TMEM173-211ENST00000512606 TNRC6CQ9HCJ0 1690 aaKnown RBP16.28■□□□□ 0.2
TMEM173-211ENST00000512606 C10orf71Q711Q0 1435 aa16.28■□□□□ 0.2
TMEM173-211ENST00000512606 FBLN1P23142 703 aa16.27■□□□□ 0.2
TMEM173-211ENST00000512606 USHBP1Q8N6Y0 703 aa16.27■□□□□ 0.2
TMEM173-211ENST00000512606 DNAJC5GQ8N7S2 189 aa16.27■□□□□ 0.2
TMEM173-211ENST00000512606 AK7Q96M32 723 aa16.27■□□□□ 0.2
TMEM173-211ENST00000512606 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.26■□□□□ 0.19
TMEM173-211ENST00000512606 SSFA2P28290 1259 aa16.26■□□□□ 0.19
TMEM173-211ENST00000512606 RAPGEF4Q8WZA2 1011 aa16.26■□□□□ 0.19
TMEM173-211ENST00000512606 CARD11Q9BXL7 1154 aa16.26■□□□□ 0.19
TMEM173-211ENST00000512606 WWC3Q9ULE0 1092 aa16.26■□□□□ 0.19
TMEM173-211ENST00000512606 INSRP06213 1382 aa16.26■□□□□ 0.19
TMEM173-211ENST00000512606 KIF24Q5T7B8 1368 aa16.26■□□□□ 0.19
TMEM173-211ENST00000512606 SBF1O95248 1867 aa16.25■□□□□ 0.19
TMEM173-211ENST00000512606 CYP27B1O15528 508 aa16.25■□□□□ 0.19
TMEM173-211ENST00000512606 TATP17735 454 aaPredicted RBP16.25■□□□□ 0.19
TMEM173-211ENST00000512606 TOMM70O94826 608 aa16.24■□□□□ 0.19
TMEM173-211ENST00000512606 PHF14O94880 888 aa16.24■□□□□ 0.19
TMEM173-211ENST00000512606 RRS1Q15050 365 aaKnown RBP16.24■□□□□ 0.19
TMEM173-211ENST00000512606 SMARCC1Q92922 1105 aaPredicted RBP16.24■□□□□ 0.19
TMEM173-211ENST00000512606 FLT4P35916 1363 aa16.24■□□□□ 0.19
TMEM173-211ENST00000512606 SMIM5Q71RC9 77 aa16.23■□□□□ 0.19
TMEM173-211ENST00000512606 MYH14Q7Z406 1995 aaKnown RBP16.22■□□□□ 0.19
TMEM173-211ENST00000512606 MPRIPQ6WCQ1 1025 aa16.22■□□□□ 0.19
TMEM173-211ENST00000512606 LINC00116Q8NCU8 138 aa16.22■□□□□ 0.19
TMEM173-211ENST00000512606 TESK2Q96S53 571 aa16.22■□□□□ 0.19
TMEM173-211ENST00000512606 KDRP35968 1356 aa16.22■□□□□ 0.19
TMEM173-211ENST00000512606 PLEKHG2Q9H7P9 1386 aa16.21■□□□□ 0.19
TMEM173-211ENST00000512606 PIGBQ92521 554 aa16.2■□□□□ 0.18
TMEM173-211ENST00000512606 LOC102724428A0A0B4J2F2 783 aa16.19■□□□□ 0.18
TMEM173-211ENST00000512606 SIK1P57059 783 aa16.19■□□□□ 0.18
TMEM173-211ENST00000512606 NEUROD1Q13562 356 aa16.19■□□□□ 0.18
TMEM173-211ENST00000512606 NKX1-1Q15270 411 aaPredicted RBP16.19■□□□□ 0.18
TMEM173-211ENST00000512606 JMYQ8N9B5 988 aa16.19■□□□□ 0.18
TMEM173-211ENST00000512606 NMRK2Q9NPI5 230 aa16.19■□□□□ 0.18
TMEM173-211ENST00000512606 RBM46Q8TBY0 533 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms