RNA–Protein interactions for RNA: ENST00000512522.1

PDGFRA-210, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-210ENST00000512522 NEFMP07197 916 aa13.13□□□□□ -0.31
PDGFRA-210ENST00000512522 FKBP8Q14318 412 aa13.13□□□□□ -0.31
PDGFRA-210ENST00000512522 NEUROD2Q15784 382 aa13.13□□□□□ -0.31
PDGFRA-210ENST00000512522 WDR63Q8IWG1 891 aa13.13□□□□□ -0.31
PDGFRA-210ENST00000512522 CDCA7LQ96GN5 454 aa13.13□□□□□ -0.31
PDGFRA-210ENST00000512522 DLG5Q8TDM6 1919 aa13.13□□□□□ -0.31
PDGFRA-210ENST00000512522 GOLGA2Q08379 1002 aa13.12□□□□□ -0.31
PDGFRA-210ENST00000512522 SLFN5Q08AF3 891 aa13.12□□□□□ -0.31
PDGFRA-210ENST00000512522 MTHFSDQ2M296 383 aaKnown RBP13.12□□□□□ -0.31
PDGFRA-210ENST00000512522 ILDR1Q86SU0 546 aaPredicted RBP13.12□□□□□ -0.31
PDGFRA-210ENST00000512522 CARD10Q9BWT7 1032 aa13.12□□□□□ -0.31
PDGFRA-210ENST00000512522 NLRP2Q9NX02 1062 aa13.12□□□□□ -0.31
PDGFRA-210ENST00000512522 BTG4Q9NY30 223 aa13.12□□□□□ -0.31
PDGFRA-210ENST00000512522 ADAMTS2O95450 1211 aa13.11□□□□□ -0.31
PDGFRA-210ENST00000512522 CSB-PGBD3P0DP91 1061 aa13.11□□□□□ -0.31
PDGFRA-210ENST00000512522 GAS2L2Q8NHY3 880 aa13.11□□□□□ -0.31
PDGFRA-210ENST00000512522 SLIT2O94813 1529 aa13.11□□□□□ -0.31
PDGFRA-210ENST00000512522 NUTM2BA6NNL0 878 aaPredicted RBP13.1□□□□□ -0.31
PDGFRA-210ENST00000512522 NUTM2EB1AL46 878 aaPredicted RBP13.1□□□□□ -0.31
PDGFRA-210ENST00000512522 LARP1Q6PKG0 1096 aaKnown RBP13.1□□□□□ -0.31
PDGFRA-210ENST00000512522 NUTM2AQ8IVF1 878 aaPredicted RBP13.1□□□□□ -0.31
PDGFRA-210ENST00000512522 NRAPQ86VF7 1730 aa13.1□□□□□ -0.31
PDGFRA-210ENST00000512522 IL16Q14005 1332 aa13.1□□□□□ -0.31
PDGFRA-210ENST00000512522 LRP6O75581 1613 aa13.1□□□□□ -0.31
PDGFRA-210ENST00000512522 PLCH1Q4KWH8 1693 aa13.09□□□□□ -0.31
PDGFRA-210ENST00000512522 HTATSF1O43719 755 aaKnown RBP13.09□□□□□ -0.31
PDGFRA-210ENST00000512522 EVA1CP58658 441 aa13.09□□□□□ -0.31
PDGFRA-210ENST00000512522 CRB1P82279 1406 aa13.09□□□□□ -0.31
PDGFRA-210ENST00000512522 LMOD3Q0VAK6 560 aa13.09□□□□□ -0.31
PDGFRA-210ENST00000512522 AMOTQ4VCS5 1084 aa13.09□□□□□ -0.31
PDGFRA-210ENST00000512522 DUSP27Q5VZP5 1158 aa13.09□□□□□ -0.31
PDGFRA-210ENST00000512522 TOM1L2Q6ZVM7 507 aa13.09□□□□□ -0.31
PDGFRA-210ENST00000512522 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.09□□□□□ -0.31
PDGFRA-210ENST00000512522 NWD2Q9ULI1 1742 aa13.09□□□□□ -0.31
PDGFRA-210ENST00000512522 MEGF6O75095 1541 aa13.08□□□□□ -0.31
PDGFRA-210ENST00000512522 E9PSI1 815 aa13.08□□□□□ -0.32
PDGFRA-210ENST00000512522 PLEKHO1Q53GL0 409 aaPredicted RBP13.08□□□□□ -0.32
PDGFRA-210ENST00000512522 FNBP4Q8N3X1 1017 aaPredicted RBP13.08□□□□□ -0.32
PDGFRA-210ENST00000512522 RAPGEF4Q8WZA2 1011 aa13.07□□□□□ -0.32
PDGFRA-210ENST00000512522 STRN4Q9NRL3 753 aa13.07□□□□□ -0.32
PDGFRA-210ENST00000512522 OVOS2A0A0G2JMS6 1433 aa13.06□□□□□ -0.32
PDGFRA-210ENST00000512522 ZNF853P0CG23 659 aa13.06□□□□□ -0.32
PDGFRA-210ENST00000512522 TATP17735 454 aaPredicted RBP13.06□□□□□ -0.32
PDGFRA-210ENST00000512522 ZBTB12Q9Y330 459 aaPredicted RBP13.06□□□□□ -0.32
PDGFRA-210ENST00000512522 MAP3K5Q99683 1374 aa13.06□□□□□ -0.32
PDGFRA-210ENST00000512522 PKD1L3Q7Z443 1732 aa13.05□□□□□ -0.32
PDGFRA-210ENST00000512522 BCL9LQ86UU0 1499 aa13.05□□□□□ -0.32
PDGFRA-210ENST00000512522 GNAT3A8MTJ3 354 aa13.05□□□□□ -0.32
PDGFRA-210ENST00000512522 AKAP4Q5JQC9 854 aa13.05□□□□□ -0.32
PDGFRA-210ENST00000512522 THUMPD2Q9BTF0 503 aaKnown RBP13.05□□□□□ -0.32
PDGFRA-210ENST00000512522 DISP2A7MBM2 1401 aa13.05□□□□□ -0.32
PDGFRA-210ENST00000512522 CALD1Q05682 793 aaKnown RBP13.04□□□□□ -0.32
PDGFRA-210ENST00000512522 DCTN1Q14203 1278 aa13.04□□□□□ -0.32
PDGFRA-210ENST00000512522 UNC5CLQ8IV45 518 aa13.04□□□□□ -0.32
PDGFRA-210ENST00000512522 IL17REQ8NFR9 667 aa13.04□□□□□ -0.32
PDGFRA-210ENST00000512522 SPATA31A1Q5TZJ5 1347 aa13.04□□□□□ -0.32
PDGFRA-210ENST00000512522 CEMIPQ8WUJ3 1361 aa13.04□□□□□ -0.32
PDGFRA-210ENST00000512522 LRRC37A3O60309 1634 aa13.03□□□□□ -0.32
PDGFRA-210ENST00000512522 ADAMTS7Q9UKP4 1686 aa13.03□□□□□ -0.32
PDGFRA-210ENST00000512522 PARP4Q9UKK3 1724 aaKnown RBP13.03□□□□□ -0.32
PDGFRA-210ENST00000512522 IL2RBP14784 551 aa13.03□□□□□ -0.32
PDGFRA-210ENST00000512522 ZNF530Q6P9A1 599 aaPredicted RBP13.03□□□□□ -0.32
PDGFRA-210ENST00000512522 MCM10Q7L590 875 aa13.03□□□□□ -0.32
PDGFRA-210ENST00000512522 IFT57Q9NWB7 429 aa13.03□□□□□ -0.32
PDGFRA-210ENST00000512522 SPG7Q9UQ90 795 aa13.03□□□□□ -0.32
PDGFRA-210ENST00000512522 SPATA31A5Q5VU36 1347 aa13.03□□□□□ -0.32
PDGFRA-210ENST00000512522 SPATA31A7Q8IWB4 1347 aa13.03□□□□□ -0.32
PDGFRA-210ENST00000512522 CHL1O00533 1208 aa13.02□□□□□ -0.33
PDGFRA-210ENST00000512522 RTF1Q92541 710 aaKnown RBP13.02□□□□□ -0.33
PDGFRA-210ENST00000512522 NGLY1Q96IV0 654 aa13.02□□□□□ -0.33
PDGFRA-210ENST00000512522 CFAP44Q96MT7 982 aa13.02□□□□□ -0.33
PDGFRA-210ENST00000512522 C8orf37Q96NL8 207 aa13.02□□□□□ -0.33
PDGFRA-210ENST00000512522 MYH16Q9H6N6 1097 aa13.02□□□□□ -0.33
PDGFRA-210ENST00000512522 THRAP3Q9Y2W1 955 aaKnown RBP13.02□□□□□ -0.33
PDGFRA-210ENST00000512522 FANCIQ9NVI1 1328 aa13.02□□□□□ -0.33
PDGFRA-210ENST00000512522 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.02□□□□□ -0.33
PDGFRA-210ENST00000512522 CYP27B1O15528 508 aa13.01□□□□□ -0.33
PDGFRA-210ENST00000512522 PHKG2P15735 406 aa13.01□□□□□ -0.33
PDGFRA-210ENST00000512522 GNAI1P63096 354 aa13.01□□□□□ -0.33
PDGFRA-210ENST00000512522 VPS72Q15906 364 aa13.01□□□□□ -0.33
PDGFRA-210ENST00000512522 ZCRB1Q8TBF4 217 aaKnown RBP13.01□□□□□ -0.33
PDGFRA-210ENST00000512522 FBXO41Q8TF61 875 aa13.01□□□□□ -0.33
PDGFRA-210ENST00000512522 LGR6Q9HBX8 967 aa13.01□□□□□ -0.33
PDGFRA-210ENST00000512522 SHANK3Q9BYB0 1731 aa13.01□□□□□ -0.33
PDGFRA-210ENST00000512522 WNK3Q9BYP7 1800 aa13□□□□□ -0.33
PDGFRA-210ENST00000512522 RNF123Q5XPI4 1314 aa13□□□□□ -0.33
PDGFRA-210ENST00000512522 RNMTO43148 476 aaKnown RBP13□□□□□ -0.33
PDGFRA-210ENST00000512522 NKX1-1Q15270 411 aaPredicted RBP13□□□□□ -0.33
PDGFRA-210ENST00000512522 C1orf141Q5JVX7 400 aa13□□□□□ -0.33
PDGFRA-210ENST00000512522 BARGINQ6ZT62 677 aa13□□□□□ -0.33
PDGFRA-210ENST00000512522 IFNL2Q8IZJ0 200 aa13□□□□□ -0.33
PDGFRA-210ENST00000512522 TSR2Q969E8 191 aaKnown RBP12.99□□□□□ -0.33
PDGFRA-210ENST00000512522 CDCA7Q9BWT1 371 aaPredicted RBP12.99□□□□□ -0.33
PDGFRA-210ENST00000512522 MBIPQ9NS73 344 aa12.99□□□□□ -0.33
PDGFRA-210ENST00000512522 BABAM1Q9NWV8 329 aa12.99□□□□□ -0.33
PDGFRA-210ENST00000512522 USP35Q9P2H5 1018 aa12.99□□□□□ -0.33
PDGFRA-210ENST00000512522 KDM6AO15550 1401 aaPredicted RBP12.98□□□□□ -0.33
PDGFRA-210ENST00000512522 VIRMAQ69YN4 1812 aaKnown RBP12.98□□□□□ -0.33
PDGFRA-210ENST00000512522 MPRIPQ6WCQ1 1025 aa12.98□□□□□ -0.33
PDGFRA-210ENST00000512522 USP21Q9UK80 565 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms