RNA–Protein interactions for RNA: ENST00000512304.2

PROM1-213, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-213ENST00000512304 AMIGO3Q86WK7 504 aa13.32□□□□□ -0.28
PROM1-213ENST00000512304 SYTL4Q96C24 671 aaPredicted RBP13.32□□□□□ -0.28
PROM1-213ENST00000512304 ABCC6O95255 1503 aa13.32□□□□□ -0.28
PROM1-213ENST00000512304 NSD2O96028 1365 aa13.32□□□□□ -0.28
PROM1-213ENST00000512304 TRPM1Q7Z4N2 1603 aa13.31□□□□□ -0.28
PROM1-213ENST00000512304 ANKRD24Q8TF21 1146 aa13.31□□□□□ -0.28
PROM1-213ENST00000512304 ERBB3P21860 1342 aa13.31□□□□□ -0.28
PROM1-213ENST00000512304 BTAF1O14981 1849 aa13.3□□□□□ -0.28
PROM1-213ENST00000512304 SLC27A3Q5K4L6 730 aa13.3□□□□□ -0.28
PROM1-213ENST00000512304 NME9Q86XW9 330 aa13.3□□□□□ -0.28
PROM1-213ENST00000512304 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.3□□□□□ -0.28
PROM1-213ENST00000512304 KCNH5Q8NCM2 988 aa13.3□□□□□ -0.28
PROM1-213ENST00000512304 RGPD5Q99666 1765 aa13.3□□□□□ -0.28
PROM1-213ENST00000512304 LTV1Q96GA3 475 aaPredicted RBP13.29□□□□□ -0.28
PROM1-213ENST00000512304 CCNL1Q9UK58 526 aaPredicted RBP13.28□□□□□ -0.28
PROM1-213ENST00000512304 MYCNP04198 464 aaPredicted RBP13.27□□□□□ -0.29
PROM1-213ENST00000512304 FBLN1P23142 703 aa13.26□□□□□ -0.29
PROM1-213ENST00000512304 COL24A1Q17RW2 1714 aa13.26□□□□□ -0.29
PROM1-213ENST00000512304 TUBGCP6Q96RT7 1819 aa13.26□□□□□ -0.29
PROM1-213ENST00000512304 IGSF1Q8N6C5 1336 aa13.25□□□□□ -0.29
PROM1-213ENST00000512304 KTN1Q86UP2 1357 aaKnown RBP13.24□□□□□ -0.29
PROM1-213ENST00000512304 STAC3Q96MF2 364 aa13.24□□□□□ -0.29
PROM1-213ENST00000512304 NMRK2Q9NPI5 230 aa13.24□□□□□ -0.29
PROM1-213ENST00000512304 CD2APQ9Y5K6 639 aa13.24□□□□□ -0.29
PROM1-213ENST00000512304 TTC21AQ8NDW8 1320 aa13.23□□□□□ -0.29
PROM1-213ENST00000512304 APLP1P51693 650 aa13.23□□□□□ -0.29
PROM1-213ENST00000512304 ANKRD36BQ8N2N9 1353 aa13.22□□□□□ -0.29
PROM1-213ENST00000512304 EVC2Q86UK5 1308 aa13.21□□□□□ -0.29
PROM1-213ENST00000512304 ZNF692Q9BU19 519 aaPredicted RBP13.21□□□□□ -0.29
PROM1-213ENST00000512304 SBNO2Q9Y2G9 1366 aa13.2□□□□□ -0.3
PROM1-213ENST00000512304 PHF14O94880 888 aa13.2□□□□□ -0.3
PROM1-213ENST00000512304 USHBP1Q8N6Y0 703 aa13.2□□□□□ -0.3
PROM1-213ENST00000512304 QRICH2Q9H0J4 1663 aa13.2□□□□□ -0.3
PROM1-213ENST00000512304 USP31Q70CQ4 1352 aa13.2□□□□□ -0.3
PROM1-213ENST00000512304 MEGF6O75095 1541 aa13.18□□□□□ -0.3
PROM1-213ENST00000512304 CD163L1Q9NR16 1453 aa13.18□□□□□ -0.3
PROM1-213ENST00000512304 TNS4Q8IZW8 715 aa13.18□□□□□ -0.3
PROM1-213ENST00000512304 QSER1Q2KHR3 1735 aa13.18□□□□□ -0.3
PROM1-213ENST00000512304 PCNTO95613 3336 aa13.17□□□□□ -0.3
PROM1-213ENST00000512304 TOMM70O94826 608 aa13.17□□□□□ -0.3
PROM1-213ENST00000512304 ZCRB1Q8TBF4 217 aaKnown RBP13.17□□□□□ -0.3
PROM1-213ENST00000512304 IP6K1Q92551 441 aa13.17□□□□□ -0.3
PROM1-213ENST00000512304 KLRG1Q96E93 195 aa13.16□□□□□ -0.3
PROM1-213ENST00000512304 SLC12A5Q9H2X9 1139 aa13.16□□□□□ -0.3
PROM1-213ENST00000512304 USP47Q96K76 1375 aa13.16□□□□□ -0.3
PROM1-213ENST00000512304 A0A0G2JLW4 131 aa13.15□□□□□ -0.3
PROM1-213ENST00000512304 PRELPP51888 382 aa13.15□□□□□ -0.3
PROM1-213ENST00000512304 DOT1LQ8TEK3 1739 aa13.15□□□□□ -0.3
PROM1-213ENST00000512304 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.14□□□□□ -0.31
PROM1-213ENST00000512304 NBPF6Q5VWK0 638 aa13.14□□□□□ -0.31
PROM1-213ENST00000512304 JMYQ8N9B5 988 aa13.14□□□□□ -0.31
PROM1-213ENST00000512304 TMC1Q8TDI8 760 aa13.14□□□□□ -0.31
PROM1-213ENST00000512304 L3MBTL2Q969R5 705 aa13.14□□□□□ -0.31
PROM1-213ENST00000512304 NBPF4Q96M43 638 aa13.14□□□□□ -0.31
PROM1-213ENST00000512304 MAP3K19Q56UN5 1328 aa13.13□□□□□ -0.31
PROM1-213ENST00000512304 KIAA1210Q9ULL0 1709 aa13.13□□□□□ -0.31
PROM1-213ENST00000512304 PALLDQ8WX93 1383 aa13.13□□□□□ -0.31
PROM1-213ENST00000512304 MPRIPQ6WCQ1 1025 aa13.13□□□□□ -0.31
PROM1-213ENST00000512304 LY75O60449 1722 aa13.13□□□□□ -0.31
PROM1-213ENST00000512304 HOXC9P31274 260 aa13.12□□□□□ -0.31
PROM1-213ENST00000512304 ARHGAP27Q6ZUM4 889 aa13.12□□□□□ -0.31
PROM1-213ENST00000512304 LINC00116Q8NCU8 138 aa13.12□□□□□ -0.31
PROM1-213ENST00000512304 BCS1LQ9Y276 419 aa13.12□□□□□ -0.31
PROM1-213ENST00000512304 PXDNLA1KZ92 1463 aa13.11□□□□□ -0.31
PROM1-213ENST00000512304 AK7Q96M32 723 aa13.11□□□□□ -0.31
PROM1-213ENST00000512304 TOGARAM1Q9Y4F4 1720 aa13.1□□□□□ -0.31
PROM1-213ENST00000512304 FAM208AQ9UK61 1670 aaKnown RBP13.1□□□□□ -0.31
PROM1-213ENST00000512304 MMP10P09238 476 aa13.1□□□□□ -0.31
PROM1-213ENST00000512304 FOXD4L1Q9NU39 408 aa13.1□□□□□ -0.31
PROM1-213ENST00000512304 CYP27B1O15528 508 aa13.09□□□□□ -0.31
PROM1-213ENST00000512304 DPEP1P16444 411 aa13.09□□□□□ -0.31
PROM1-213ENST00000512304 ITPK1Q13572 414 aa13.09□□□□□ -0.31
PROM1-213ENST00000512304 RRS1Q15050 365 aaKnown RBP13.09□□□□□ -0.31
PROM1-213ENST00000512304 C9orf131Q5VYM1 1079 aa13.09□□□□□ -0.31
PROM1-213ENST00000512304 A0A1W2PP64 1363 aa13.08□□□□□ -0.31
PROM1-213ENST00000512304 POLA2Q14181 598 aa13.08□□□□□ -0.32
PROM1-213ENST00000512304 FLAD1Q8NFF5 587 aa13.08□□□□□ -0.32
PROM1-213ENST00000512304 RBM46Q8TBY0 533 aaKnown RBP13.08□□□□□ -0.32
PROM1-213ENST00000512304 PIGBQ92521 554 aa13.08□□□□□ -0.32
PROM1-213ENST00000512304 SIN3AQ96ST3 1273 aa13.08□□□□□ -0.32
PROM1-213ENST00000512304 RRAGCQ9HB90 399 aa13.08□□□□□ -0.32
PROM1-213ENST00000512304 LTN1O94822 1766 aa13.07□□□□□ -0.32
PROM1-213ENST00000512304 CICQ96RK0 1608 aaPredicted RBP13.07□□□□□ -0.32
PROM1-213ENST00000512304 AMPHP49418 695 aa13.07□□□□□ -0.32
PROM1-213ENST00000512304 KCPQ6ZWJ8 1503 aa13.07□□□□□ -0.32
PROM1-213ENST00000512304 KAT6BQ8WYB5 2073 aa13.06□□□□□ -0.32
PROM1-213ENST00000512304 USP54Q70EL1 1684 aa13.06□□□□□ -0.32
PROM1-213ENST00000512304 MON2Q7Z3U7 1717 aa13.06□□□□□ -0.32
PROM1-213ENST00000512304 HSPA1AP0DMV8 641 aaKnown RBP13.06□□□□□ -0.32
PROM1-213ENST00000512304 HSPA1BP0DMV9 641 aaKnown RBP13.06□□□□□ -0.32
PROM1-213ENST00000512304 KCNA3P22001 575 aa13.06□□□□□ -0.32
PROM1-213ENST00000512304 ROCK2O75116 1388 aaKnown RBP13.06□□□□□ -0.32
PROM1-213ENST00000512304 C5P01031 1676 aa13.05□□□□□ -0.32
PROM1-213ENST00000512304 WDR90Q96KV7 1748 aa13.05□□□□□ -0.32
PROM1-213ENST00000512304 GNPATO15228 680 aa13.05□□□□□ -0.32
PROM1-213ENST00000512304 FCHSD2O94868 740 aa13.05□□□□□ -0.32
PROM1-213ENST00000512304 POTEHQ6S545 545 aa13.05□□□□□ -0.32
PROM1-213ENST00000512304 HDGFL2Q7Z4V5 671 aaPredicted RBP13.05□□□□□ -0.32
PROM1-213ENST00000512304 ASAP1Q9ULH1 1129 aa13.05□□□□□ -0.32
PROM1-213ENST00000512304 C4BP0C0L5 1744 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms