RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 RGPD2P0DJD1 1756 aa9.63□□□□□ -0.87
PDLIM5-215ENST00000511586 APBA3O96018 575 aa9.63□□□□□ -0.87
PDLIM5-215ENST00000511586 DEFB132Q7Z7B7 95 aa9.63□□□□□ -0.87
PDLIM5-215ENST00000511586 BCL11BQ9C0K0 894 aaPredicted RBP9.63□□□□□ -0.87
PDLIM5-215ENST00000511586 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.63□□□□□ -0.877e-10■■■■□ 26.7
PDLIM5-215ENST00000511586 SPG7Q9UQ90 795 aa9.63□□□□□ -0.87
PDLIM5-215ENST00000511586 RALBP1Q15311 655 aa9.62□□□□□ -0.87
PDLIM5-215ENST00000511586 SULT6B1Q6IMI4 303 aa9.62□□□□□ -0.87
PDLIM5-215ENST00000511586 PARD3Q8TEW0 1356 aa9.62□□□□□ -0.87
PDLIM5-215ENST00000511586 PCDH11XQ9BZA7 1347 aa9.61□□□□□ -0.87
PDLIM5-215ENST00000511586 PCDH11YQ9BZA8 1340 aa9.61□□□□□ -0.87
PDLIM5-215ENST00000511586 EN1Q05925 392 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-215ENST00000511586 ACSBG1Q96GR2 724 aa9.61□□□□□ -0.87
PDLIM5-215ENST00000511586 PLEKHG2Q9H7P9 1386 aa9.61□□□□□ -0.87
PDLIM5-215ENST00000511586 U2SURPO15042 1029 aaKnown RBP9.6□□□□□ -0.87
PDLIM5-215ENST00000511586 CYP27B1O15528 508 aa9.6□□□□□ -0.87
PDLIM5-215ENST00000511586 KCNQ2O43526 872 aa9.6□□□□□ -0.87
PDLIM5-215ENST00000511586 AMOTQ4VCS5 1084 aa9.6□□□□□ -0.87
PDLIM5-215ENST00000511586 PLEKHO1Q53GL0 409 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-215ENST00000511586 AEBP1Q8IUX7 1158 aa9.6□□□□□ -0.87
PDLIM5-215ENST00000511586 NUDCQ9Y266 331 aa9.6□□□□□ -0.87
PDLIM5-215ENST00000511586 KDRP35968 1356 aa9.6□□□□□ -0.87
PDLIM5-215ENST00000511586 RGPD1P0DJD0 1748 aa9.59□□□□□ -0.87
PDLIM5-215ENST00000511586 PLSCR1O15162 318 aa9.59□□□□□ -0.87
PDLIM5-215ENST00000511586 HMOX1P09601 288 aa9.59□□□□□ -0.87
PDLIM5-215ENST00000511586 PRIM1P49642 420 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-215ENST00000511586 NKX1-1Q15270 411 aaPredicted RBP9.59□□□□□ -0.87
PDLIM5-215ENST00000511586 EZH2Q15910 746 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-215ENST00000511586 PTF1AQ7RTS3 328 aa9.59□□□□□ -0.87
PDLIM5-215ENST00000511586 IFNL2Q8IZJ0 200 aa9.59□□□□□ -0.87
PDLIM5-215ENST00000511586 CAMKK2Q96RR4 588 aa9.59□□□□□ -0.87
PDLIM5-215ENST00000511586 COL3A1P02461 1466 aaPredicted RBP9.59□□□□□ -0.87
PDLIM5-215ENST00000511586 PHKG2P15735 406 aa9.58□□□□□ -0.88
PDLIM5-215ENST00000511586 SYTL4Q96C24 671 aaPredicted RBP9.58□□□□□ -0.88
PDLIM5-215ENST00000511586 MYBBP1AQ9BQG0 1328 aaKnown RBP9.57□□□□□ -0.88
PDLIM5-215ENST00000511586 TNS1Q9HBL0 1735 aaKnown RBP9.57□□□□□ -0.88
PDLIM5-215ENST00000511586 HSP90AB1P08238 724 aaKnown RBP9.57□□□□□ -0.88
PDLIM5-215ENST00000511586 U2AF1L5P0DN76 240 aaPredicted RBP9.57□□□□□ -0.88
PDLIM5-215ENST00000511586 U2AF1Q01081 240 aaKnown RBP eCLIP9.57□□□□□ -0.88
PDLIM5-215ENST00000511586 C1orf141Q5JVX7 400 aa9.57□□□□□ -0.88
PDLIM5-215ENST00000511586 ZNF530Q6P9A1 599 aaPredicted RBP9.57□□□□□ -0.88
PDLIM5-215ENST00000511586 PRKRIP1Q9H875 184 aaPredicted RBP9.56□□□□□ -0.88
PDLIM5-215ENST00000511586 SBF2Q86WG5 1849 aa9.56□□□□□ -0.88
PDLIM5-215ENST00000511586 PKD1L3Q7Z443 1732 aa9.56□□□□□ -0.88
PDLIM5-215ENST00000511586 SHANK3Q9BYB0 1731 aa9.56□□□□□ -0.88
PDLIM5-215ENST00000511586 FCHSD2O94868 740 aa9.55□□□□□ -0.88
PDLIM5-215ENST00000511586 AKAP4Q5JQC9 854 aa9.55□□□□□ -0.88
PDLIM5-215ENST00000511586 MPRIPQ6WCQ1 1025 aa9.55□□□□□ -0.88
PDLIM5-215ENST00000511586 DCAF5Q96JK2 942 aa9.55□□□□□ -0.88
PDLIM5-215ENST00000511586 NHSQ6T4R5 1651 aa9.55□□□□□ -0.88
PDLIM5-215ENST00000511586 ERVV-2B6SEH9 535 aa9.54□□□□□ -0.88
PDLIM5-215ENST00000511586 PRKAR2BP31323 418 aa9.54□□□□□ -0.88
PDLIM5-215ENST00000511586 TXNRD1Q16881 649 aa9.54□□□□□ -0.88
PDLIM5-215ENST00000511586 MTHFSDQ2M296 383 aaKnown RBP9.54□□□□□ -0.88
PDLIM5-215ENST00000511586 NBPF14Q5TI25 921 aa9.54□□□□□ -0.88
PDLIM5-215ENST00000511586 PROM2Q8N271 834 aa9.54□□□□□ -0.88
PDLIM5-215ENST00000511586 RSPH6AQ9H0K4 717 aa9.54□□□□□ -0.88
PDLIM5-215ENST00000511586 GAS2L2Q8NHY3 880 aa9.53□□□□□ -0.88
PDLIM5-215ENST00000511586 PIGBQ92521 554 aa9.53□□□□□ -0.88
PDLIM5-215ENST00000511586 PNNQ9H307 717 aaKnown RBP9.53□□□□□ -0.88
PDLIM5-215ENST00000511586 TMOD3Q9NYL9 352 aa9.53□□□□□ -0.88
PDLIM5-215ENST00000511586 KAT6BQ8WYB5 2073 aa9.52□□□□□ -0.88
PDLIM5-215ENST00000511586 ANP32CO43423 234 aa9.52□□□□□ -0.89
PDLIM5-215ENST00000511586 NEFMP07197 916 aa9.52□□□□□ -0.89
PDLIM5-215ENST00000511586 CABP4P57796 275 aa9.52□□□□□ -0.89
PDLIM5-215ENST00000511586 SLC27A3Q5K4L6 730 aa9.52□□□□□ -0.89
PDLIM5-215ENST00000511586 DOT1LQ8TEK3 1739 aa9.52□□□□□ -0.89
PDLIM5-215ENST00000511586 SMARCC1Q92922 1105 aaPredicted RBP9.52□□□□□ -0.89
PDLIM5-215ENST00000511586 HMGB2P26583 209 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-215ENST00000511586 PHACTR3Q96KR7 559 aa9.51□□□□□ -0.89
PDLIM5-215ENST00000511586 RGPD3A6NKT7 1758 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-215ENST00000511586 RGPD4Q7Z3J3 1758 aa9.5□□□□□ -0.89
PDLIM5-215ENST00000511586 KDM6AO15550 1401 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-215ENST00000511586 BTAF1O14981 1849 aa9.5□□□□□ -0.89
PDLIM5-215ENST00000511586 GNAT3A8MTJ3 354 aa9.5□□□□□ -0.89
PDLIM5-215ENST00000511586 RNMTO43148 476 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-215ENST00000511586 R3HDM1Q15032 1099 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-215ENST00000511586 WDR43Q15061 677 aaKnown RBP eCLIP9.5□□□□□ -0.89
PDLIM5-215ENST00000511586 NFATC2IPQ8NCF5 419 aa9.5□□□□□ -0.89
PDLIM5-215ENST00000511586 LGR6Q9HBX8 967 aa9.5□□□□□ -0.89
PDLIM5-215ENST00000511586 CCNL1Q9UK58 526 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-215ENST00000511586 ASAP1Q9ULH1 1129 aa9.5□□□□□ -0.89
PDLIM5-215ENST00000511586 PALLDQ8WX93 1383 aa9.5□□□□□ -0.89
PDLIM5-215ENST00000511586 MAP3K5Q99683 1374 aa9.5□□□□□ -0.89
PDLIM5-215ENST00000511586 PSDA5PKW4 1024 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-215ENST00000511586 PLEKHF1Q96S99 279 aa9.49□□□□□ -0.89
PDLIM5-215ENST00000511586 ATG3Q9NT62 314 aa9.49□□□□□ -0.89
PDLIM5-215ENST00000511586 LRRC4BQ9NT99 713 aa9.49□□□□□ -0.89
PDLIM5-215ENST00000511586 STK32BQ9NY57 414 aa9.49□□□□□ -0.89
PDLIM5-215ENST00000511586 RREB1Q92766 1687 aa9.48□□□□□ -0.89
PDLIM5-215ENST00000511586 TOGARAM1Q9Y4F4 1720 aa9.48□□□□□ -0.89
PDLIM5-215ENST00000511586 KCNQ4P56696 695 aa9.48□□□□□ -0.89
PDLIM5-215ENST00000511586 RTF1Q92541 710 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-215ENST00000511586 SLC52A2Q9HAB3 445 aa9.48□□□□□ -0.89
PDLIM5-215ENST00000511586 ANO8Q9HCE9 1232 aaPredicted RBP9.48□□□□□ -0.89
PDLIM5-215ENST00000511586 MAPK8IP3Q9UPT6 1336 aa9.48□□□□□ -0.89
PDLIM5-215ENST00000511586 LOC102724428A0A0B4J2F2 783 aa9.47□□□□□ -0.89
PDLIM5-215ENST00000511586 HTATSF1O43719 755 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-215ENST00000511586 SIK1P57059 783 aa9.47□□□□□ -0.89
PDLIM5-215ENST00000511586 TEFQ10587 303 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms