RNA–Protein interactions for RNA: ENST00000510940.1

LETM1-204, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-204ENST00000510940 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.68■□□□□ 0.42
LETM1-204ENST00000510940 SPG7Q9UQ90 795 aa17.68■□□□□ 0.42
LETM1-204ENST00000510940 HTATSF1O43719 755 aaKnown RBP17.67■□□□□ 0.42
LETM1-204ENST00000510940 CENPBP07199 599 aaPredicted RBP17.67■□□□□ 0.42
LETM1-204ENST00000510940 IL2RBP14784 551 aa17.67■□□□□ 0.42
LETM1-204ENST00000510940 RIPK4P57078 832 aa17.67■□□□□ 0.42
LETM1-204ENST00000510940 PARP4Q9UKK3 1724 aaKnown RBP17.67■□□□□ 0.42
LETM1-204ENST00000510940 VPS72Q15906 364 aa17.66■□□□□ 0.42
LETM1-204ENST00000510940 RTF1Q92541 710 aaKnown RBP17.66■□□□□ 0.42
LETM1-204ENST00000510940 PHACTR3Q96KR7 559 aa17.66■□□□□ 0.42
LETM1-204ENST00000510940 CCDC9Q9Y3X0 531 aaKnown RBP17.66■□□□□ 0.42
LETM1-204ENST00000510940 RXRBP28702 533 aa17.65■□□□□ 0.42
LETM1-204ENST00000510940 NEUROD2Q15784 382 aa17.65■□□□□ 0.42
LETM1-204ENST00000510940 C1orf141Q5JVX7 400 aa17.65■□□□□ 0.42
LETM1-204ENST00000510940 QTRT2Q9H974 415 aaKnown RBP17.65■□□□□ 0.42
LETM1-204ENST00000510940 WDR63Q8IWG1 891 aa17.64■□□□□ 0.41
LETM1-204ENST00000510940 SPATA31A1Q5TZJ5 1347 aa17.64■□□□□ 0.41
LETM1-204ENST00000510940 SPATA31A5Q5VU36 1347 aa17.64■□□□□ 0.41
LETM1-204ENST00000510940 SPATA31A7Q8IWB4 1347 aa17.64■□□□□ 0.41
LETM1-204ENST00000510940 RBM6P78332 1123 aaKnown RBP17.63■□□□□ 0.41
LETM1-204ENST00000510940 MTHFSDQ2M296 383 aaKnown RBP17.63■□□□□ 0.41
LETM1-204ENST00000510940 SALL2Q9Y467 1007 aaPredicted RBP17.63■□□□□ 0.41
LETM1-204ENST00000510940 BCL9LQ86UU0 1499 aa17.63■□□□□ 0.41
LETM1-204ENST00000510940 GNAT3A8MTJ3 354 aa17.62■□□□□ 0.41
LETM1-204ENST00000510940 HSP90AB1P08238 724 aaKnown RBP17.62■□□□□ 0.41
LETM1-204ENST00000510940 AKAP4Q5JQC9 854 aa17.62■□□□□ 0.41
LETM1-204ENST00000510940 ZNF530Q6P9A1 599 aaPredicted RBP17.62■□□□□ 0.41
LETM1-204ENST00000510940 BARGINQ6ZT62 677 aa17.62■□□□□ 0.41
LETM1-204ENST00000510940 WWC1Q8IX03 1113 aa17.62■□□□□ 0.41
LETM1-204ENST00000510940 ZCRB1Q8TBF4 217 aaKnown RBP17.62■□□□□ 0.41
LETM1-204ENST00000510940 USP35Q9P2H5 1018 aa17.62■□□□□ 0.41
LETM1-204ENST00000510940 RRP7AQ9Y3A4 280 aaKnown RBP17.62■□□□□ 0.41
LETM1-204ENST00000510940 DLG5Q8TDM6 1919 aa17.62■□□□□ 0.41
LETM1-204ENST00000510940 OVOS2A0A0G2JMS6 1433 aa17.62■□□□□ 0.41
LETM1-204ENST00000510940 GOLGA2Q08379 1002 aa17.61■□□□□ 0.41
LETM1-204ENST00000510940 MAP3K5Q99683 1374 aa17.61■□□□□ 0.41
LETM1-204ENST00000510940 IFNL2Q8IZJ0 200 aa17.6■□□□□ 0.41
LETM1-204ENST00000510940 RGS17Q9UGC6 210 aaPredicted RBP17.6■□□□□ 0.41
LETM1-204ENST00000510940 IL16Q14005 1332 aa17.6■□□□□ 0.41
LETM1-204ENST00000510940 PCDH11XQ9BZA7 1347 aa17.6■□□□□ 0.41
LETM1-204ENST00000510940 PCDH11YQ9BZA8 1340 aa17.6■□□□□ 0.41
LETM1-204ENST00000510940 MEGF6O75095 1541 aa17.6■□□□□ 0.41
LETM1-204ENST00000510940 PKD1L3Q7Z443 1732 aa17.6■□□□□ 0.41
LETM1-204ENST00000510940 ZNF521Q96K83 1311 aa17.59■□□□□ 0.41
LETM1-204ENST00000510940 E9PSI1 815 aa17.58■□□□□ 0.4
LETM1-204ENST00000510940 EXOC5O00471 708 aa17.58■□□□□ 0.4
LETM1-204ENST00000510940 TRIM35Q9UPQ4 493 aa17.58■□□□□ 0.4
LETM1-204ENST00000510940 WNK3Q9BYP7 1800 aa17.58■□□□□ 0.4
LETM1-204ENST00000510940 DISP2A7MBM2 1401 aa17.57■□□□□ 0.4
LETM1-204ENST00000510940 GJD4Q96KN9 370 aaPredicted RBP17.57■□□□□ 0.4
LETM1-204ENST00000510940 MYH16Q9H6N6 1097 aa17.57■□□□□ 0.4
LETM1-204ENST00000510940 ATRNO75882 1429 aa17.56■□□□□ 0.4
LETM1-204ENST00000510940 POTEAQ6S8J7 498 aa17.56■□□□□ 0.4
LETM1-204ENST00000510940 SENP3-EIF4A1A0A087X0R7 540 aa17.54■□□□□ 0.4
LETM1-204ENST00000510940 PHKG2P15735 406 aa17.54■□□□□ 0.4
LETM1-204ENST00000510940 GNAI1P63096 354 aa17.54■□□□□ 0.4
LETM1-204ENST00000510940 DDB1Q16531 1140 aa17.54■□□□□ 0.4
LETM1-204ENST00000510940 DCAF5Q96JK2 942 aa17.54■□□□□ 0.4
LETM1-204ENST00000510940 BABAM1Q9NWV8 329 aa17.54■□□□□ 0.4
LETM1-204ENST00000510940 IFT57Q9NWB7 429 aa17.53■□□□□ 0.4
LETM1-204ENST00000510940 TNS2Q63HR2 1409 aa17.53■□□□□ 0.4
LETM1-204ENST00000510940 SLFN5Q08AF3 891 aa17.52■□□□□ 0.4
LETM1-204ENST00000510940 TEFQ10587 303 aa17.52■□□□□ 0.4
LETM1-204ENST00000510940 RNMTO43148 476 aaKnown RBP17.51■□□□□ 0.39
LETM1-204ENST00000510940 NKX1-1Q15270 411 aaPredicted RBP17.51■□□□□ 0.39
LETM1-204ENST00000510940 FAM98CQ17RN3 349 aaKnown RBP17.51■□□□□ 0.39
LETM1-204ENST00000510940 MCM10Q7L590 875 aa17.51■□□□□ 0.39
LETM1-204ENST00000510940 DDX54Q8TDD1 881 aaKnown RBP17.51■□□□□ 0.39
LETM1-204ENST00000510940 CFAP44Q96MT7 982 aa17.51■□□□□ 0.39
LETM1-204ENST00000510940 CEMIPQ8WUJ3 1361 aa17.51■□□□□ 0.39
LETM1-204ENST00000510940 A0A0G2JS52 829 aa17.5■□□□□ 0.39
LETM1-204ENST00000510940 CYP27B1O15528 508 aa17.5■□□□□ 0.39
LETM1-204ENST00000510940 MYT1Q01538 1121 aa17.5■□□□□ 0.39
LETM1-204ENST00000510940 VIRMAQ69YN4 1812 aaKnown RBP17.49■□□□□ 0.39
LETM1-204ENST00000510940 SCN11AQ9UI33 1791 aa17.49■□□□□ 0.39
LETM1-204ENST00000510940 ERVV-2B6SEH9 535 aa17.49■□□□□ 0.39
LETM1-204ENST00000510940 ONECUT3O60422 494 aaPredicted RBP17.49■□□□□ 0.39
LETM1-204ENST00000510940 TAF7Q15545 349 aaPredicted RBP17.49■□□□□ 0.39
LETM1-204ENST00000510940 MPRIPQ6WCQ1 1025 aa17.49■□□□□ 0.39
LETM1-204ENST00000510940 IL17REQ8NFR9 667 aa17.49■□□□□ 0.39
LETM1-204ENST00000510940 DCTN1Q14203 1278 aa17.48■□□□□ 0.39
LETM1-204ENST00000510940 TRMT2AQ8IZ69 625 aaKnown RBP17.48■□□□□ 0.39
LETM1-204ENST00000510940 LAS1LQ9Y4W2 734 aaKnown RBP17.48■□□□□ 0.39
LETM1-204ENST00000510940 ADAMTS7Q9UKP4 1686 aa17.48■□□□□ 0.39
LETM1-204ENST00000510940 LRRC37A3O60309 1634 aa17.47■□□□□ 0.39
LETM1-204ENST00000510940 SHANK3Q9BYB0 1731 aa17.47■□□□□ 0.39
LETM1-204ENST00000510940 CT47B1P0C2W7 299 aaPredicted RBP17.47■□□□□ 0.39
LETM1-204ENST00000510940 KAT6BQ8WYB5 2073 aa17.47■□□□□ 0.39
LETM1-204ENST00000510940 GLI3P10071 1580 aa17.46■□□□□ 0.39
LETM1-204ENST00000510940 ZNF853P0CG23 659 aa17.46■□□□□ 0.39
LETM1-204ENST00000510940 CABP4P57796 275 aa17.46■□□□□ 0.39
LETM1-204ENST00000510940 DUSP27Q5VZP5 1158 aa17.46■□□□□ 0.39
LETM1-204ENST00000510940 CDCA7LQ96GN5 454 aa17.46■□□□□ 0.39
LETM1-204ENST00000510940 THUMPD2Q9BTF0 503 aaKnown RBP17.46■□□□□ 0.39
LETM1-204ENST00000510940 CHMP4AQ9BY43 222 aa17.46■□□□□ 0.39
LETM1-204ENST00000510940 THSD7AQ9UPZ6 1657 aa17.45■□□□□ 0.38
LETM1-204ENST00000510940 CHL1O00533 1208 aa17.45■□□□□ 0.38
LETM1-204ENST00000510940 SLC52A2Q9HAB3 445 aa17.45■□□□□ 0.38
LETM1-204ENST00000510940 LGR6Q9HBX8 967 aa17.45■□□□□ 0.38
LETM1-204ENST00000510940 TSPYL4Q9UJ04 414 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms