RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 FKBP5Q13451 457 aaPredicted RBP15.76■□□□□ 0.11
LIN54-210ENST00000510877 MYBBP1AQ9BQG0 1328 aaKnown RBP15.76■□□□□ 0.11
LIN54-210ENST00000510877 IPO8O15397 1037 aaKnown RBP15.76■□□□□ 0.11
LIN54-210ENST00000510877 BEGAINQ9BUH8 593 aa15.76■□□□□ 0.11
LIN54-210ENST00000510877 NFATC2IPQ8NCF5 419 aa15.76■□□□□ 0.11
LIN54-210ENST00000510877 FNBP4Q8N3X1 1017 aaPredicted RBP15.75■□□□□ 0.11
LIN54-210ENST00000510877 EDC4Q6P2E9 1401 aaKnown RBP15.75■□□□□ 0.11
LIN54-210ENST00000510877 RUNDC1Q96C34 613 aa15.75■□□□□ 0.11
LIN54-210ENST00000510877 MYO3AQ8NEV4 1616 aa15.75■□□□□ 0.11
LIN54-210ENST00000510877 MS4A1P11836 297 aa15.75■□□□□ 0.11
LIN54-210ENST00000510877 EYA1Q99502 592 aa15.75■□□□□ 0.11
LIN54-210ENST00000510877 DPY19L2Q6NUT2 758 aa15.74■□□□□ 0.11
LIN54-210ENST00000510877 FKBP8Q14318 412 aa15.74■□□□□ 0.11
LIN54-210ENST00000510877 A0A1W2PP64 1363 aa15.73■□□□□ 0.11
LIN54-210ENST00000510877 SPATA31A5Q5VU36 1347 aa15.73■□□□□ 0.11
LIN54-210ENST00000510877 SPATA31A7Q8IWB4 1347 aa15.73■□□□□ 0.11
LIN54-210ENST00000510877 AKAP4Q5JQC9 854 aa15.73■□□□□ 0.11
LIN54-210ENST00000510877 SPATA31A1Q5TZJ5 1347 aa15.73■□□□□ 0.11
LIN54-210ENST00000510877 H0YIN7 160 aa15.73■□□□□ 0.11
LIN54-210ENST00000510877 HSP90AB3PQ58FF7 597 aa15.73■□□□□ 0.11
LIN54-210ENST00000510877 UPF1Q92900 1129 aaKnown RBP eCLIP15.73■□□□□ 0.11
LIN54-210ENST00000510877 WDHD1O75717 1129 aaPredicted RBP15.73■□□□□ 0.11
LIN54-210ENST00000510877 SLC39A6Q13433 755 aa15.73■□□□□ 0.11
LIN54-210ENST00000510877 TPTE2Q6XPS3 522 aa15.73■□□□□ 0.11
LIN54-210ENST00000510877 MST1RQ04912 1400 aa15.73■□□□□ 0.11
LIN54-210ENST00000510877 APAF1O14727 1248 aa15.73■□□□□ 0.11
LIN54-210ENST00000510877 TAF7Q15545 349 aaPredicted RBP15.73■□□□□ 0.11
LIN54-210ENST00000510877 GRIN3BO60391 1043 aa15.72■□□□□ 0.11
LIN54-210ENST00000510877 EIF4A2Q14240 407 aaKnown RBP15.72■□□□□ 0.11
LIN54-210ENST00000510877 ILDR2Q71H61 639 aa15.72■□□□□ 0.11
LIN54-210ENST00000510877 NOL10Q9BSC4 688 aaKnown RBP15.72■□□□□ 0.11
LIN54-210ENST00000510877 LMOD1P29536 600 aaPredicted RBP15.72■□□□□ 0.11
LIN54-210ENST00000510877 BCL2L13Q9BXK5 485 aa15.72■□□□□ 0.11
LIN54-210ENST00000510877 SLIT1O75093 1534 aa15.72■□□□□ 0.11
LIN54-210ENST00000510877 MED14O60244 1454 aa15.71■□□□□ 0.11
LIN54-210ENST00000510877 ARHGAP23Q9P227 1491 aa15.71■□□□□ 0.11
LIN54-210ENST00000510877 SPATA31E1Q6ZUB1 1445 aa15.71■□□□□ 0.11
LIN54-210ENST00000510877 KIF1BO60333 1816 aa15.71■□□□□ 0.11
LIN54-210ENST00000510877 SNRPA1P09661 255 aaKnown RBP15.71■□□□□ 0.11
LIN54-210ENST00000510877 GCC2Q8IWJ2 1684 aa15.71■□□□□ 0.11
LIN54-210ENST00000510877 PPP2R1AP30153 589 aa15.71■□□□□ 0.11
LIN54-210ENST00000510877 TRIM34Q9BYJ4 488 aa15.71■□□□□ 0.11
LIN54-210ENST00000510877 NSD2O96028 1365 aa15.71■□□□□ 0.11
LIN54-210ENST00000510877 ERBB3P21860 1342 aa15.71■□□□□ 0.1
LIN54-210ENST00000510877 TTLL12Q14166 644 aaPredicted RBP15.71■□□□□ 0.1
LIN54-210ENST00000510877 ALKQ9UM73 1620 aa15.7■□□□□ 0.1
LIN54-210ENST00000510877 GPTP24298 496 aa15.7■□□□□ 0.1
LIN54-210ENST00000510877 CCDC30Q5VVM6 783 aa15.7■□□□□ 0.1
LIN54-210ENST00000510877 CWC22Q9HCG8 908 aaKnown RBP15.7■□□□□ 0.1
LIN54-210ENST00000510877 KCNQ4P56696 695 aa15.7■□□□□ 0.1
LIN54-210ENST00000510877 BARGINQ6ZT62 677 aa15.7■□□□□ 0.1
LIN54-210ENST00000510877 PPP1R42Q7Z4L9 355 aa15.7■□□□□ 0.1
LIN54-210ENST00000510877 TBC1D2BQ9UPU7 963 aa15.7■□□□□ 0.1
LIN54-210ENST00000510877 IQSEC2Q5JU85 1478 aa15.7■□□□□ 0.1
LIN54-210ENST00000510877 C6orf229H3BNL8 230 aa15.7■□□□□ 0.1
LIN54-210ENST00000510877 PLIN1O60240 522 aa15.7■□□□□ 0.1
LIN54-210ENST00000510877 MPHOSPH8Q99549 860 aa15.7■□□□□ 0.1
LIN54-210ENST00000510877 LOC102724428A0A0B4J2F2 783 aa15.69■□□□□ 0.1
LIN54-210ENST00000510877 SIK1P57059 783 aa15.69■□□□□ 0.1
LIN54-210ENST00000510877 MCM10Q7L590 875 aa15.69■□□□□ 0.1
LIN54-210ENST00000510877 SMC4Q9NTJ3 1288 aa15.69■□□□□ 0.1
LIN54-210ENST00000510877 POLKQ9UBT6 870 aa15.69■□□□□ 0.1
LIN54-210ENST00000510877 IQGAP1P46940 1657 aa15.69■□□□□ 0.1
LIN54-210ENST00000510877 SLC27A3Q5K4L6 730 aa15.69■□□□□ 0.1
LIN54-210ENST00000510877 YY1P25490 414 aa15.69■□□□□ 0.1
LIN54-210ENST00000510877 DDX46Q7L014 1031 aaKnown RBP15.69■□□□□ 0.1
LIN54-210ENST00000510877 PTPRUQ92729 1446 aa15.69■□□□□ 0.1
LIN54-210ENST00000510877 TRMT112Q9UI30 125 aaKnown RBP15.69■□□□□ 0.1
LIN54-210ENST00000510877 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.68■□□□□ 0.1
LIN54-210ENST00000510877 CNBD1Q8NA66 436 aa15.68■□□□□ 0.1
LIN54-210ENST00000510877 NIP7Q9Y221 180 aaKnown RBP eCLIP15.68■□□□□ 0.1
LIN54-210ENST00000510877 ZBTB3Q9H5J0 574 aa15.68■□□□□ 0.1
LIN54-210ENST00000510877 USP6P35125 1406 aa15.67■□□□□ 0.1
LIN54-210ENST00000510877 DZIP3Q86Y13 1208 aaKnown RBP15.67■□□□□ 0.1
LIN54-210ENST00000510877 RBM5P52756 815 aaKnown RBP eCLIP15.67■□□□□ 0.1
LIN54-210ENST00000510877 AATKQ6ZMQ8 1374 aa15.66■□□□□ 0.1
LIN54-210ENST00000510877 NLRP3Q96P20 1036 aa15.66■□□□□ 0.1
LIN54-210ENST00000510877 MYOM2P54296 1465 aa15.66■□□□□ 0.1
LIN54-210ENST00000510877 CRB1P82279 1406 aa15.66■□□□□ 0.1
LIN54-210ENST00000510877 ANKIB1Q9P2G1 1089 aa15.66■□□□□ 0.1
LIN54-210ENST00000510877 OVOS2A0A0G2JMS6 1433 aa15.66■□□□□ 0.1
LIN54-210ENST00000510877 OVOS2A0A0J9YW53 1432 aa15.66■□□□□ 0.1
LIN54-210ENST00000510877 OVOS2Q6IE36 1432 aa15.66■□□□□ 0.1
LIN54-210ENST00000510877 MIS18AQ9NYP9 233 aa15.66■□□□□ 0.1
LIN54-210ENST00000510877 ZNF428Q96B54 188 aa15.65■□□□□ 0.1
LIN54-210ENST00000510877 NYXQ9GZU5 481 aa15.65■□□□□ 0.1
LIN54-210ENST00000510877 IQGAP3Q86VI3 1631 aa15.65■□□□□ 0.1
LIN54-210ENST00000510877 KCNQ2O43526 872 aa15.65■□□□□ 0.1
LIN54-210ENST00000510877 ERVV-2B6SEH9 535 aa15.65■□□□□ 0.1
LIN54-210ENST00000510877 SLC16A10Q8TF71 515 aa15.65■□□□□ 0.1
LIN54-210ENST00000510877 AEBP1Q8IUX7 1158 aa15.64■□□□□ 0.09
LIN54-210ENST00000510877 ANP32BQ92688 251 aaKnown RBP15.64■□□□□ 0.09
LIN54-210ENST00000510877 DIP2AQ14689 1571 aa15.64■□□□□ 0.09
LIN54-210ENST00000510877 NBR1Q14596 966 aa15.64■□□□□ 0.09
LIN54-210ENST00000510877 NFE2L2Q16236 605 aa15.64■□□□□ 0.09
LIN54-210ENST00000510877 DCTN1Q14203 1278 aa15.64■□□□□ 0.09
LIN54-210ENST00000510877 IGHMBP2P38935 993 aaKnown RBP15.63■□□□□ 0.09
LIN54-210ENST00000510877 SLC15A2Q16348 729 aa15.63■□□□□ 0.09
LIN54-210ENST00000510877 GPBP1L1Q9HC44 474 aaPredicted RBP15.63■□□□□ 0.09
LIN54-210ENST00000510877 CNNM1Q9NRU3 951 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms