RNA–Protein interactions for RNA: ENST00000510801.5

COPS4-208, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 381 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-208ENST00000510801 ZCRB1Q8TBF4 217 aaKnown RBP16.93■□□□□ 0.3
COPS4-208ENST00000510801 APBA3O96018 575 aa16.91■□□□□ 0.3
COPS4-208ENST00000510801 KDRP35968 1356 aa16.9■□□□□ 0.3
COPS4-208ENST00000510801 CC2D1BQ5T0F9 858 aaKnown RBP16.9■□□□□ 0.3
COPS4-208ENST00000510801 USHBP1Q8N6Y0 703 aa16.9■□□□□ 0.3
COPS4-208ENST00000510801 IL13P35225 146 aa16.89■□□□□ 0.29
COPS4-208ENST00000510801 MTHFSP49914 203 aa16.89■□□□□ 0.29
COPS4-208ENST00000510801 EN1Q05925 392 aaPredicted RBP16.89■□□□□ 0.29
COPS4-208ENST00000510801 PCDH11XQ9BZA7 1347 aa16.89■□□□□ 0.29
COPS4-208ENST00000510801 PCDH11YQ9BZA8 1340 aa16.89■□□□□ 0.29
COPS4-208ENST00000510801 RGPD3A6NKT7 1758 aaPredicted RBP16.88■□□□□ 0.29
COPS4-208ENST00000510801 RGPD4Q7Z3J3 1758 aa16.88■□□□□ 0.29
COPS4-208ENST00000510801 NKX1-1Q15270 411 aaPredicted RBP16.88■□□□□ 0.29
COPS4-208ENST00000510801 RGPD2P0DJD1 1756 aa16.87■□□□□ 0.29
COPS4-208ENST00000510801 SBF2Q86WG5 1849 aa16.86■□□□□ 0.29
COPS4-208ENST00000510801 EZH2Q15910 746 aaKnown RBP16.86■□□□□ 0.29
COPS4-208ENST00000510801 DDX54Q8TDD1 881 aaKnown RBP16.86■□□□□ 0.29
COPS4-208ENST00000510801 SPG7Q9UQ90 795 aa16.86■□□□□ 0.29
COPS4-208ENST00000510801 NHSQ6T4R5 1651 aa16.85■□□□□ 0.29
COPS4-208ENST00000510801 PKD1L3Q7Z443 1732 aa16.85■□□□□ 0.29
COPS4-208ENST00000510801 CYP27B1O15528 508 aa16.85■□□□□ 0.29
COPS4-208ENST00000510801 SHANK3Q9BYB0 1731 aa16.84■□□□□ 0.29
COPS4-208ENST00000510801 KCNQ2O43526 872 aa16.84■□□□□ 0.29
COPS4-208ENST00000510801 PTF1AQ7RTS3 328 aa16.84■□□□□ 0.29
COPS4-208ENST00000510801 COL3A1P02461 1466 aaPredicted RBP16.84■□□□□ 0.29
COPS4-208ENST00000510801 AMOTQ4VCS5 1084 aa16.83■□□□□ 0.28
COPS4-208ENST00000510801 DIAPH1O60610 1272 aaKnown RBP16.82■□□□□ 0.28
COPS4-208ENST00000510801 PROM2Q8N271 834 aa16.82■□□□□ 0.28
COPS4-208ENST00000510801 RREB1Q92766 1687 aa16.81■□□□□ 0.28
COPS4-208ENST00000510801 POTEDQ86YR6 584 aa16.81■□□□□ 0.28
COPS4-208ENST00000510801 PPP2R1AP30153 589 aa16.8■□□□□ 0.28
COPS4-208ENST00000510801 PLEKHO1Q53GL0 409 aaPredicted RBP16.8■□□□□ 0.28
COPS4-208ENST00000510801 IFNL2Q8IZJ0 200 aa16.8■□□□□ 0.28
COPS4-208ENST00000510801 ACSBG1Q96GR2 724 aa16.8■□□□□ 0.28
COPS4-208ENST00000510801 HSP90AB1P08238 724 aaKnown RBP16.79■□□□□ 0.28
COPS4-208ENST00000510801 PHKG2P15735 406 aa16.79■□□□□ 0.28
COPS4-208ENST00000510801 PRIM1P49642 420 aaKnown RBP16.79■□□□□ 0.28
COPS4-208ENST00000510801 SULT6B1Q6IMI4 303 aa16.79■□□□□ 0.28
COPS4-208ENST00000510801 RALBP1Q15311 655 aa16.78■□□□□ 0.28
COPS4-208ENST00000510801 TXNRD1Q16881 649 aa16.78■□□□□ 0.28
COPS4-208ENST00000510801 AEBP1Q8IUX7 1158 aa16.78■□□□□ 0.28
COPS4-208ENST00000510801 CFAP53Q96M91 514 aa16.78■□□□□ 0.28
COPS4-208ENST00000510801 SRCAPQ6ZRS2 3230 aa16.77■□□□□ 0.28
COPS4-208ENST00000510801 HMGB2P26583 209 aaKnown RBP16.77■□□□□ 0.28
COPS4-208ENST00000510801 SLC27A3Q5K4L6 730 aa16.77■□□□□ 0.28
COPS4-208ENST00000510801 NBPF14Q5TI25 921 aa16.77■□□□□ 0.28
COPS4-208ENST00000510801 DCAF5Q96JK2 942 aa16.76■□□□□ 0.27
COPS4-208ENST00000510801 ERVV-2B6SEH9 535 aa16.75■□□□□ 0.27
COPS4-208ENST00000510801 DDX10Q13206 875 aaKnown RBP16.75■□□□□ 0.27
COPS4-208ENST00000510801 NUP188Q5SRE5 1749 aa16.75■□□□□ 0.27
COPS4-208ENST00000510801 BTAF1O14981 1849 aa16.73■□□□□ 0.27
COPS4-208ENST00000510801 NUDCQ9Y266 331 aa16.73■□□□□ 0.27
COPS4-208ENST00000510801 DOT1LQ8TEK3 1739 aa16.73■□□□□ 0.27
COPS4-208ENST00000510801 AKAP4Q5JQC9 854 aa16.72■□□□□ 0.27
COPS4-208ENST00000510801 ZNF530Q6P9A1 599 aaPredicted RBP16.72■□□□□ 0.27
COPS4-208ENST00000510801 SMARCC1Q92922 1105 aaPredicted RBP16.72■□□□□ 0.27
COPS4-208ENST00000510801 SYTL4Q96C24 671 aaPredicted RBP16.72■□□□□ 0.27
COPS4-208ENST00000510801 PIGBQ92521 554 aa16.71■□□□□ 0.27
COPS4-208ENST00000510801 PAPPAQ13219 1627 aa16.7■□□□□ 0.26
COPS4-208ENST00000510801 FCHSD2O94868 740 aa16.7■□□□□ 0.26
COPS4-208ENST00000510801 R3HDM1Q15032 1099 aaKnown RBP16.7■□□□□ 0.26
COPS4-208ENST00000510801 C1orf141Q5JVX7 400 aa16.7■□□□□ 0.26
COPS4-208ENST00000510801 ANO8Q9HCE9 1232 aaPredicted RBP16.7■□□□□ 0.26
COPS4-208ENST00000510801 LRRC4BQ9NT99 713 aa16.7■□□□□ 0.26
COPS4-208ENST00000510801 TOGARAM1Q9Y4F4 1720 aa16.7■□□□□ 0.26
COPS4-208ENST00000510801 KDM6AO15550 1401 aaPredicted RBP16.7■□□□□ 0.26
COPS4-208ENST00000510801 HMOX1P09601 288 aa16.69■□□□□ 0.26
COPS4-208ENST00000510801 SLC15A2Q16348 729 aa16.69■□□□□ 0.26
COPS4-208ENST00000510801 MPRIPQ6WCQ1 1025 aa16.69■□□□□ 0.26
COPS4-208ENST00000510801 RSPH6AQ9H0K4 717 aa16.69■□□□□ 0.26
COPS4-208ENST00000510801 TMOD3Q9NYL9 352 aa16.69■□□□□ 0.26
COPS4-208ENST00000510801 U2SURPO15042 1029 aaKnown RBP16.68■□□□□ 0.26
COPS4-208ENST00000510801 CNGB1Q14028 1251 aaPredicted RBP16.68■□□□□ 0.26
COPS4-208ENST00000510801 PALLDQ8WX93 1383 aa16.67■□□□□ 0.26
COPS4-208ENST00000510801 ZNF316A6NFI3 1004 aaPredicted RBP16.67■□□□□ 0.26
COPS4-208ENST00000510801 MTHFSDQ2M296 383 aaKnown RBP16.67■□□□□ 0.26
COPS4-208ENST00000510801 GAS2L2Q8NHY3 880 aa16.67■□□□□ 0.26
COPS4-208ENST00000510801 AKT1S1Q96B36 256 aa16.67■□□□□ 0.26
COPS4-208ENST00000510801 STK32BQ9NY57 414 aa16.67■□□□□ 0.26
COPS4-208ENST00000510801 LY75O60449 1722 aa16.67■□□□□ 0.26
COPS4-208ENST00000510801 MYBBP1AQ9BQG0 1328 aaKnown RBP16.67■□□□□ 0.26
COPS4-208ENST00000510801 PSDA5PKW4 1024 aaPredicted RBP16.66■□□□□ 0.26
COPS4-208ENST00000510801 PRKRIP1Q9H875 184 aaPredicted RBP16.65■□□□□ 0.26
COPS4-208ENST00000510801 CCNL1Q9UK58 526 aaPredicted RBP16.65■□□□□ 0.26
COPS4-208ENST00000510801 MRC1P22897 1456 aa16.65■□□□□ 0.26
COPS4-208ENST00000510801 ADAMTS7Q9UKP4 1686 aa16.65■□□□□ 0.26
COPS4-208ENST00000510801 LRP5O75197 1615 aa16.64■□□□□ 0.25
COPS4-208ENST00000510801 U2AF1L5P0DN76 240 aaPredicted RBP16.64■□□□□ 0.25
COPS4-208ENST00000510801 U2AF1Q01081 240 aaKnown RBP eCLIP16.64■□□□□ 0.25
COPS4-208ENST00000510801 ATG3Q9NT62 314 aa16.64■□□□□ 0.25
COPS4-208ENST00000510801 CABP4P57796 275 aa16.63■□□□□ 0.25
COPS4-208ENST00000510801 ASAP1Q9ULH1 1129 aa16.63■□□□□ 0.25
COPS4-208ENST00000510801 ITGB4P16144 1822 aa16.63■□□□□ 0.25
COPS4-208ENST00000510801 LOC102724428A0A0B4J2F2 783 aa16.62■□□□□ 0.25
COPS4-208ENST00000510801 RNMTO43148 476 aaKnown RBP16.62■□□□□ 0.25
COPS4-208ENST00000510801 PRKAR2BP31323 418 aa16.62■□□□□ 0.25
COPS4-208ENST00000510801 SIK1P57059 783 aa16.62■□□□□ 0.25
COPS4-208ENST00000510801 PNNQ9H307 717 aaKnown RBP16.62■□□□□ 0.25
COPS4-208ENST00000510801 SLC52A2Q9HAB3 445 aa16.62■□□□□ 0.25
COPS4-208ENST00000510801 CEMIPQ8WUJ3 1361 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms