RNA–Protein interactions for RNA: ENST00000510405.5

SPOCK1-208, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 5

Gene SPOCK1, Length 399 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-208ENST00000510405 RREB1Q92766 1687 aa23.42■■□□□ 1.34
SPOCK1-208ENST00000510405 EZH2Q15910 746 aaKnown RBP23.4■■□□□ 1.34
SPOCK1-208ENST00000510405 PCDH11XQ9BZA7 1347 aa23.38■■□□□ 1.33
SPOCK1-208ENST00000510405 PCDH11YQ9BZA8 1340 aa23.38■■□□□ 1.33
SPOCK1-208ENST00000510405 DDX54Q8TDD1 881 aaKnown RBP23.38■■□□□ 1.33
SPOCK1-208ENST00000510405 SHANK3Q9BYB0 1731 aa23.37■■□□□ 1.33
SPOCK1-208ENST00000510405 USHBP1Q8N6Y0 703 aa23.37■■□□□ 1.33
SPOCK1-208ENST00000510405 EIF4A2Q14240 407 aaKnown RBP23.36■■□□□ 1.33
SPOCK1-208ENST00000510405 NBPF14Q5TI25 921 aa23.36■■□□□ 1.33
SPOCK1-208ENST00000510405 EYA1Q99502 592 aa23.36■■□□□ 1.33
SPOCK1-208ENST00000510405 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.36■■□□□ 1.33
SPOCK1-208ENST00000510405 NUP188Q5SRE5 1749 aa23.35■■□□□ 1.33
SPOCK1-208ENST00000510405 PKD1L3Q7Z443 1732 aa23.35■■□□□ 1.33
SPOCK1-208ENST00000510405 SPG7Q9UQ90 795 aa23.34■■□□□ 1.33
SPOCK1-208ENST00000510405 IGSF1Q8N6C5 1336 aa23.33■■□□□ 1.32
SPOCK1-208ENST00000510405 CC2D1BQ5T0F9 858 aaKnown RBP23.31■■□□□ 1.32
SPOCK1-208ENST00000510405 ACSBG1Q96GR2 724 aa23.31■■□□□ 1.32
SPOCK1-208ENST00000510405 BTAF1O14981 1849 aa23.31■■□□□ 1.32
SPOCK1-208ENST00000510405 KCNQ2O43526 872 aa23.3■■□□□ 1.32
SPOCK1-208ENST00000510405 DOT1LQ8TEK3 1739 aa23.3■■□□□ 1.32
SPOCK1-208ENST00000510405 HMGB2P26583 209 aaKnown RBP23.28■■□□□ 1.32
SPOCK1-208ENST00000510405 ZEB1P37275 1124 aaPredicted RBP23.28■■□□□ 1.32
SPOCK1-208ENST00000510405 PTF1AQ7RTS3 328 aa23.28■■□□□ 1.32
SPOCK1-208ENST00000510405 MTHFSP49914 203 aa23.27■■□□□ 1.32
SPOCK1-208ENST00000510405 KAT6BQ8WYB5 2073 aa23.27■■□□□ 1.32
SPOCK1-208ENST00000510405 TXNRD1Q16881 649 aa23.26■■□□□ 1.31
SPOCK1-208ENST00000510405 PRIM1P49642 420 aaKnown RBP23.25■■□□□ 1.31
SPOCK1-208ENST00000510405 R3HDM1Q15032 1099 aaKnown RBP23.25■■□□□ 1.31
SPOCK1-208ENST00000510405 IL13P35225 146 aa23.24■■□□□ 1.31
SPOCK1-208ENST00000510405 NKX1-1Q15270 411 aaPredicted RBP23.24■■□□□ 1.31
SPOCK1-208ENST00000510405 AMOTQ4VCS5 1084 aa23.24■■□□□ 1.31
SPOCK1-208ENST00000510405 SLC27A3Q5K4L6 730 aa23.24■■□□□ 1.31
SPOCK1-208ENST00000510405 SYTL4Q96C24 671 aaPredicted RBP23.24■■□□□ 1.31
SPOCK1-208ENST00000510405 KDRP35968 1356 aa23.24■■□□□ 1.31
SPOCK1-208ENST00000510405 LRP5O75197 1615 aa23.23■■□□□ 1.31
SPOCK1-208ENST00000510405 PSDA5PKW4 1024 aaPredicted RBP23.23■■□□□ 1.31
SPOCK1-208ENST00000510405 CYP27B1O15528 508 aa23.23■■□□□ 1.31
SPOCK1-208ENST00000510405 IFNL2Q8IZJ0 200 aa23.23■■□□□ 1.31
SPOCK1-208ENST00000510405 DIAPH1O60610 1272 aaKnown RBP23.21■■□□□ 1.31
SPOCK1-208ENST00000510405 HSP90AB1P08238 724 aaKnown RBP23.21■■□□□ 1.31
SPOCK1-208ENST00000510405 PLEKHO1Q53GL0 409 aaPredicted RBP23.21■■□□□ 1.31
SPOCK1-208ENST00000510405 PROM2Q8N271 834 aa23.21■■□□□ 1.31
SPOCK1-208ENST00000510405 CFAP53Q96M91 514 aa23.19■■□□□ 1.3
SPOCK1-208ENST00000510405 PHKG2P15735 406 aa23.18■■□□□ 1.3
SPOCK1-208ENST00000510405 SULT6B1Q6IMI4 303 aa23.18■■□□□ 1.3
SPOCK1-208ENST00000510405 STK32BQ9NY57 414 aa23.18■■□□□ 1.3
SPOCK1-208ENST00000510405 LY75O60449 1722 aa23.18■■□□□ 1.3
SPOCK1-208ENST00000510405 SMARCC1Q92922 1105 aaPredicted RBP23.16■■□□□ 1.3
SPOCK1-208ENST00000510405 PAPPAQ13219 1627 aa23.15■■□□□ 1.3
SPOCK1-208ENST00000510405 TOGARAM1Q9Y4F4 1720 aa23.15■■□□□ 1.3
SPOCK1-208ENST00000510405 ITGB4P16144 1822 aa23.15■■□□□ 1.3
SPOCK1-208ENST00000510405 COL3A1P02461 1466 aaPredicted RBP23.14■■□□□ 1.29
SPOCK1-208ENST00000510405 SLC15A2Q16348 729 aa23.14■■□□□ 1.29
SPOCK1-208ENST00000510405 C1orf141Q5JVX7 400 aa23.14■■□□□ 1.29
SPOCK1-208ENST00000510405 DCAF5Q96JK2 942 aa23.14■■□□□ 1.29
SPOCK1-208ENST00000510405 ZNF530Q6P9A1 599 aaPredicted RBP23.13■■□□□ 1.29
SPOCK1-208ENST00000510405 MPRIPQ6WCQ1 1025 aa23.13■■□□□ 1.29
SPOCK1-208ENST00000510405 AEBP1Q8IUX7 1158 aa23.13■■□□□ 1.29
SPOCK1-208ENST00000510405 ANO8Q9HCE9 1232 aaPredicted RBP23.13■■□□□ 1.29
SPOCK1-208ENST00000510405 ERVV-2B6SEH9 535 aa23.12■■□□□ 1.29
SPOCK1-208ENST00000510405 CNGB1Q14028 1251 aaPredicted RBP23.12■■□□□ 1.29
SPOCK1-208ENST00000510405 TMOD3Q9NYL9 352 aa23.12■■□□□ 1.29
SPOCK1-208ENST00000510405 NUDCQ9Y266 331 aa23.11■■□□□ 1.29
SPOCK1-208ENST00000510405 PPP2R1AP30153 589 aa23.1■■□□□ 1.29
SPOCK1-208ENST00000510405 CCNL1Q9UK58 526 aaPredicted RBP23.1■■□□□ 1.29
SPOCK1-208ENST00000510405 PALLDQ8WX93 1383 aa23.1■■□□□ 1.29
SPOCK1-208ENST00000510405 LRRC4BQ9NT99 713 aa23.09■■□□□ 1.29
SPOCK1-208ENST00000510405 CASZ1Q86V15 1759 aa23.09■■□□□ 1.29
SPOCK1-208ENST00000510405 QSER1Q2KHR3 1735 aa23.08■■□□□ 1.29
SPOCK1-208ENST00000510405 PIGBQ92521 554 aa23.08■■□□□ 1.29
SPOCK1-208ENST00000510405 SPON1Q9HCB6 807 aa23.08■■□□□ 1.29
SPOCK1-208ENST00000510405 AKAP4Q5JQC9 854 aa23.07■■□□□ 1.28
SPOCK1-208ENST00000510405 U2SURPO15042 1029 aaKnown RBP23.06■■□□□ 1.28
SPOCK1-208ENST00000510405 HMOX1P09601 288 aa23.06■■□□□ 1.28
SPOCK1-208ENST00000510405 AKT1S1Q96B36 256 aa23.05■■□□□ 1.28
SPOCK1-208ENST00000510405 C5P01031 1676 aa23.04■■□□□ 1.28
SPOCK1-208ENST00000510405 SRCAPQ6ZRS2 3230 aa23.04■■□□□ 1.28
SPOCK1-208ENST00000510405 KDM6AO15550 1401 aaPredicted RBP23.03■■□□□ 1.28
SPOCK1-208ENST00000510405 RALBP1Q15311 655 aa23.03■■□□□ 1.28
SPOCK1-208ENST00000510405 CABP4P57796 275 aa23.02■■□□□ 1.28
SPOCK1-208ENST00000510405 SCN11AQ9UI33 1791 aa23.01■■□□□ 1.27
SPOCK1-208ENST00000510405 ZNF831Q5JPB2 1677 aa23.01■■□□□ 1.27
SPOCK1-208ENST00000510405 GAS2L2Q8NHY3 880 aa23.01■■□□□ 1.27
SPOCK1-208ENST00000510405 SLC16A10Q8TF71 515 aa23.01■■□□□ 1.27
SPOCK1-208ENST00000510405 TFCP2L1Q9NZI6 479 aa23.01■■□□□ 1.27
SPOCK1-208ENST00000510405 DDX10Q13206 875 aaKnown RBP23■■□□□ 1.27
SPOCK1-208ENST00000510405 ZNF827Q17R98 1081 aa23■■□□□ 1.27
SPOCK1-208ENST00000510405 MTFR1LQ9H019 292 aa23■■□□□ 1.27
SPOCK1-208ENST00000510405 TAF1LQ8IZX4 1826 aa23■■□□□ 1.27
SPOCK1-208ENST00000510405 LOC102724428A0A0B4J2F2 783 aa22.99■■□□□ 1.27
SPOCK1-208ENST00000510405 SIK1P57059 783 aa22.99■■□□□ 1.27
SPOCK1-208ENST00000510405 FCHSD2O94868 740 aa22.98■■□□□ 1.27
SPOCK1-208ENST00000510405 FLAD1Q8NFF5 587 aa22.98■■□□□ 1.27
SPOCK1-208ENST00000510405 ASAP1Q9ULH1 1129 aa22.98■■□□□ 1.27
SPOCK1-208ENST00000510405 ADAMTS7Q9UKP4 1686 aa22.97■■□□□ 1.27
SPOCK1-208ENST00000510405 MTHFSDQ2M296 383 aaKnown RBP22.97■■□□□ 1.27
SPOCK1-208ENST00000510405 ATG3Q9NT62 314 aa22.97■■□□□ 1.27
SPOCK1-208ENST00000510405 MRC1P22897 1456 aa22.97■■□□□ 1.27
SPOCK1-208ENST00000510405 U2AF1L5P0DN76 240 aaPredicted RBP22.96■■□□□ 1.27
SPOCK1-208ENST00000510405 KCNQ4P56696 695 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms