RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 NBPF14Q5TI25 921 aa29.06■■■□□ 2.24
UBE2D3-229ENST00000510129 PER1O15534 1290 aaPredicted RBP29.05■■■□□ 2.24
UBE2D3-229ENST00000510129 USHBP1Q8N6Y0 703 aa29.05■■■□□ 2.24
UBE2D3-229ENST00000510129 NPC1L1Q9UHC9 1359 aa29.04■■■□□ 2.24
UBE2D3-229ENST00000510129 PLEKHG2Q9H7P9 1386 aa29.03■■■□□ 2.24
UBE2D3-229ENST00000510129 PCDH11XQ9BZA7 1347 aa29.02■■■□□ 2.24
UBE2D3-229ENST00000510129 PCDH11YQ9BZA8 1340 aa29.02■■■□□ 2.24
UBE2D3-229ENST00000510129 NUP188Q5SRE5 1749 aa29.01■■■□□ 2.23
UBE2D3-229ENST00000510129 EIF4A2Q14240 407 aaKnown RBP29■■■□□ 2.23
UBE2D3-229ENST00000510129 EYA1Q99502 592 aa29■■■□□ 2.23
UBE2D3-229ENST00000510129 SHANK3Q9BYB0 1731 aa29■■■□□ 2.23
UBE2D3-229ENST00000510129 ACSBG1Q96GR2 724 aa28.99■■■□□ 2.23
UBE2D3-229ENST00000510129 KCNQ2O43526 872 aa28.98■■■□□ 2.23
UBE2D3-229ENST00000510129 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.98■■■□□ 2.23
UBE2D3-229ENST00000510129 SPG7Q9UQ90 795 aa28.98■■■□□ 2.23
UBE2D3-229ENST00000510129 PTF1AQ7RTS3 328 aa28.97■■■□□ 2.23
UBE2D3-229ENST00000510129 PKD1L3Q7Z443 1732 aa28.95■■■□□ 2.23
UBE2D3-229ENST00000510129 IGSF1Q8N6C5 1336 aa28.94■■■□□ 2.22
UBE2D3-229ENST00000510129 PSDA5PKW4 1024 aaPredicted RBP28.94■■■□□ 2.22
UBE2D3-229ENST00000510129 R3HDM1Q15032 1099 aaKnown RBP28.94■■■□□ 2.22
UBE2D3-229ENST00000510129 CC2D1BQ5T0F9 858 aaKnown RBP28.94■■■□□ 2.22
UBE2D3-229ENST00000510129 BTAF1O14981 1849 aa28.93■■■□□ 2.22
UBE2D3-229ENST00000510129 TXNRD1Q16881 649 aa28.93■■■□□ 2.22
UBE2D3-229ENST00000510129 DOT1LQ8TEK3 1739 aa28.91■■■□□ 2.22
UBE2D3-229ENST00000510129 SYTL4Q96C24 671 aaPredicted RBP28.91■■■□□ 2.22
UBE2D3-229ENST00000510129 PRIM1P49642 420 aaKnown RBP28.9■■■□□ 2.22
UBE2D3-229ENST00000510129 KAT6BQ8WYB5 2073 aa28.9■■■□□ 2.22
UBE2D3-229ENST00000510129 HMGB2P26583 209 aaKnown RBP28.88■■■□□ 2.21
UBE2D3-229ENST00000510129 MTHFSP49914 203 aa28.88■■■□□ 2.21
UBE2D3-229ENST00000510129 PROM2Q8N271 834 aa28.88■■■□□ 2.21
UBE2D3-229ENST00000510129 LRP5O75197 1615 aa28.87■■■□□ 2.21
UBE2D3-229ENST00000510129 CYP27B1O15528 508 aa28.87■■■□□ 2.21
UBE2D3-229ENST00000510129 NKX1-1Q15270 411 aaPredicted RBP28.86■■■□□ 2.21
UBE2D3-229ENST00000510129 SLC27A3Q5K4L6 730 aa28.86■■■□□ 2.21
UBE2D3-229ENST00000510129 IL13P35225 146 aa28.84■■■□□ 2.21
UBE2D3-229ENST00000510129 AMOTQ4VCS5 1084 aa28.84■■■□□ 2.21
UBE2D3-229ENST00000510129 IFNL2Q8IZJ0 200 aa28.84■■■□□ 2.21
UBE2D3-229ENST00000510129 STK32BQ9NY57 414 aa28.84■■■□□ 2.21
UBE2D3-229ENST00000510129 PLEKHO1Q53GL0 409 aaPredicted RBP28.82■■■□□ 2.2
UBE2D3-229ENST00000510129 KDRP35968 1356 aa28.81■■■□□ 2.2
UBE2D3-229ENST00000510129 HSP90AB1P08238 724 aaKnown RBP28.8■■■□□ 2.2
UBE2D3-229ENST00000510129 DIAPH1O60610 1272 aaKnown RBP28.79■■■□□ 2.2
UBE2D3-229ENST00000510129 PHKG2P15735 406 aa28.79■■■□□ 2.2
UBE2D3-229ENST00000510129 SULT6B1Q6IMI4 303 aa28.79■■■□□ 2.2
UBE2D3-229ENST00000510129 ZEB1P37275 1124 aaPredicted RBP28.77■■■□□ 2.2
UBE2D3-229ENST00000510129 SLC15A2Q16348 729 aa28.77■■■□□ 2.2
UBE2D3-229ENST00000510129 SMARCC1Q92922 1105 aaPredicted RBP28.76■■■□□ 2.19
UBE2D3-229ENST00000510129 CFAP53Q96M91 514 aa28.76■■■□□ 2.19
UBE2D3-229ENST00000510129 ANO8Q9HCE9 1232 aaPredicted RBP28.76■■■□□ 2.19
UBE2D3-229ENST00000510129 LY75O60449 1722 aa28.76■■■□□ 2.19
UBE2D3-229ENST00000510129 MPRIPQ6WCQ1 1025 aa28.75■■■□□ 2.19
UBE2D3-229ENST00000510129 PAPPAQ13219 1627 aa28.75■■■□□ 2.19
UBE2D3-229ENST00000510129 CNGB1Q14028 1251 aaPredicted RBP28.74■■■□□ 2.19
UBE2D3-229ENST00000510129 C1orf141Q5JVX7 400 aa28.73■■■□□ 2.19
UBE2D3-229ENST00000510129 AEBP1Q8IUX7 1158 aa28.73■■■□□ 2.19
UBE2D3-229ENST00000510129 DCAF5Q96JK2 942 aa28.73■■■□□ 2.19
UBE2D3-229ENST00000510129 TOGARAM1Q9Y4F4 1720 aa28.73■■■□□ 2.19
UBE2D3-229ENST00000510129 ITGB4P16144 1822 aa28.72■■■□□ 2.19
UBE2D3-229ENST00000510129 TMOD3Q9NYL9 352 aa28.72■■■□□ 2.19
UBE2D3-229ENST00000510129 ZNF530Q6P9A1 599 aaPredicted RBP28.71■■■□□ 2.19
UBE2D3-229ENST00000510129 LRRC4BQ9NT99 713 aa28.71■■■□□ 2.19
UBE2D3-229ENST00000510129 CCNL1Q9UK58 526 aaPredicted RBP28.71■■■□□ 2.19
UBE2D3-229ENST00000510129 SPON1Q9HCB6 807 aa28.7■■■□□ 2.18
UBE2D3-229ENST00000510129 ERVV-2B6SEH9 535 aa28.69■■■□□ 2.18
UBE2D3-229ENST00000510129 PALLDQ8WX93 1383 aa28.69■■■□□ 2.18
UBE2D3-229ENST00000510129 COL3A1P02461 1466 aaPredicted RBP28.68■■■□□ 2.18
UBE2D3-229ENST00000510129 PIGBQ92521 554 aa28.68■■■□□ 2.18
UBE2D3-229ENST00000510129 CASZ1Q86V15 1759 aa28.67■■■□□ 2.18
UBE2D3-229ENST00000510129 PPP2R1AP30153 589 aa28.65■■■□□ 2.18
UBE2D3-229ENST00000510129 AKT1S1Q96B36 256 aa28.65■■■□□ 2.18
UBE2D3-229ENST00000510129 NUDCQ9Y266 331 aa28.65■■■□□ 2.18
UBE2D3-229ENST00000510129 QSER1Q2KHR3 1735 aa28.63■■■□□ 2.17
UBE2D3-229ENST00000510129 U2SURPO15042 1029 aaKnown RBP28.63■■■□□ 2.17
UBE2D3-229ENST00000510129 HMOX1P09601 288 aa28.63■■■□□ 2.17
UBE2D3-229ENST00000510129 AKAP4Q5JQC9 854 aa28.63■■■□□ 2.17
UBE2D3-229ENST00000510129 ZNF827Q17R98 1081 aa28.62■■■□□ 2.17
UBE2D3-229ENST00000510129 TFCP2L1Q9NZI6 479 aa28.61■■■□□ 2.17
UBE2D3-229ENST00000510129 CABP4P57796 275 aa28.6■■■□□ 2.17
UBE2D3-229ENST00000510129 MTFR1LQ9H019 292 aa28.6■■■□□ 2.17
UBE2D3-229ENST00000510129 C5P01031 1676 aa28.59■■■□□ 2.17
UBE2D3-229ENST00000510129 SLC16A10Q8TF71 515 aa28.59■■■□□ 2.17
UBE2D3-229ENST00000510129 KDM6AO15550 1401 aaPredicted RBP28.59■■■□□ 2.17
UBE2D3-229ENST00000510129 PPP1R1BQ9UD71 204 aaPredicted RBP28.58■■■□□ 2.17
UBE2D3-229ENST00000510129 KCNQ4P56696 695 aa28.57■■■□□ 2.16
UBE2D3-229ENST00000510129 LOC102724428A0A0B4J2F2 783 aa28.56■■■□□ 2.16
UBE2D3-229ENST00000510129 SIK1P57059 783 aa28.56■■■□□ 2.16
UBE2D3-229ENST00000510129 ZBTB7AO95365 584 aa28.55■■■□□ 2.16
UBE2D3-229ENST00000510129 RALBP1Q15311 655 aa28.55■■■□□ 2.16
UBE2D3-229ENST00000510129 FLAD1Q8NFF5 587 aa28.55■■■□□ 2.16
UBE2D3-229ENST00000510129 ASAP1Q9ULH1 1129 aa28.55■■■□□ 2.16
UBE2D3-229ENST00000510129 GAS2L2Q8NHY3 880 aa28.54■■■□□ 2.16
UBE2D3-229ENST00000510129 PDGFDQ9GZP0 370 aaPredicted RBP28.54■■■□□ 2.16
UBE2D3-229ENST00000510129 ATG3Q9NT62 314 aa28.54■■■□□ 2.16
UBE2D3-229ENST00000510129 TAF1LQ8IZX4 1826 aa28.54■■■□□ 2.16
UBE2D3-229ENST00000510129 SCN11AQ9UI33 1791 aa28.54■■■□□ 2.16
UBE2D3-229ENST00000510129 ZNF831Q5JPB2 1677 aa28.52■■■□□ 2.16
UBE2D3-229ENST00000510129 PNPLA7Q6ZV29 1317 aa28.52■■■□□ 2.16
UBE2D3-229ENST00000510129 DDX10Q13206 875 aaKnown RBP28.52■■■□□ 2.16
UBE2D3-229ENST00000510129 MTHFSDQ2M296 383 aaKnown RBP28.52■■■□□ 2.16
UBE2D3-229ENST00000510129 C4BP0C0L5 1744 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms