RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 TSR2Q969E8 191 aaKnown RBP6.15□□□□□ -1.42
PDLIM5-214ENST00000510099 SBNO1A3KN83 1393 aa6.15□□□□□ -1.43
PDLIM5-214ENST00000510099 FLT4P35916 1363 aa6.15□□□□□ -1.43
PDLIM5-214ENST00000510099 CHD2O14647 1828 aaKnown RBP6.14□□□□□ -1.43
PDLIM5-214ENST00000510099 MAP2P11137 1827 aaKnown RBP6.14□□□□□ -1.43
PDLIM5-214ENST00000510099 NUTM2FA1L443 756 aa6.14□□□□□ -1.43
PDLIM5-214ENST00000510099 NEFMP07197 916 aa6.14□□□□□ -1.43
PDLIM5-214ENST00000510099 HMOX1P09601 288 aa6.14□□□□□ -1.43
PDLIM5-214ENST00000510099 CALD1Q05682 793 aaKnown RBP6.14□□□□□ -1.43
PDLIM5-214ENST00000510099 LMOD3Q0VAK6 560 aa6.14□□□□□ -1.43
PDLIM5-214ENST00000510099 EIF4A2Q14240 407 aaKnown RBP6.14□□□□□ -1.43
PDLIM5-214ENST00000510099 PANK1Q8TE04 598 aa6.14□□□□□ -1.43
PDLIM5-214ENST00000510099 CLUAP1Q96AJ1 413 aa6.14□□□□□ -1.43
PDLIM5-214ENST00000510099 PHACTR3Q96KR7 559 aa6.14□□□□□ -1.43
PDLIM5-214ENST00000510099 IFT57Q9NWB7 429 aa6.14□□□□□ -1.43
PDLIM5-214ENST00000510099 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.14□□□□□ -1.43
PDLIM5-214ENST00000510099 KIF24Q5T7B8 1368 aa6.14□□□□□ -1.43
PDLIM5-214ENST00000510099 MARF1Q9Y4F3 1742 aaKnown RBP6.13□□□□□ -1.43
PDLIM5-214ENST00000510099 SNPHO15079 494 aa6.13□□□□□ -1.43
PDLIM5-214ENST00000510099 ZNF853P0CG23 659 aa6.13□□□□□ -1.43
PDLIM5-214ENST00000510099 RLBP1P12271 317 aa6.13□□□□□ -1.43
PDLIM5-214ENST00000510099 EXOSC9Q06265 439 aaKnown RBP6.13□□□□□ -1.43
PDLIM5-214ENST00000510099 ZNF428Q96B54 188 aa6.13□□□□□ -1.43
PDLIM5-214ENST00000510099 BCL2L13Q9BXK5 485 aa6.13□□□□□ -1.43
PDLIM5-214ENST00000510099 TMEM121BQ9BXQ6 578 aaPredicted RBP6.13□□□□□ -1.43
PDLIM5-214ENST00000510099 OCEL1Q9H607 264 aa6.13□□□□□ -1.43
PDLIM5-214ENST00000510099 SMC4Q9NTJ3 1288 aa6.13□□□□□ -1.43
PDLIM5-214ENST00000510099 MAP3K19Q56UN5 1328 aa6.13□□□□□ -1.43
PDLIM5-214ENST00000510099 KIF16BQ96L93 1317 aa6.13□□□□□ -1.43
PDLIM5-214ENST00000510099 RTL1A6NKG5 1358 aa6.13□□□□□ -1.43
PDLIM5-214ENST00000510099 KDRP35968 1356 aa6.13□□□□□ -1.43
PDLIM5-214ENST00000510099 NFAT5O94916 1531 aa6.12□□□□□ -1.43
PDLIM5-214ENST00000510099 BRPF1P55201 1214 aaPredicted RBP6.12□□□□□ -1.43
PDLIM5-214ENST00000510099 ALDH1L2Q3SY69 923 aa6.12□□□□□ -1.43
PDLIM5-214ENST00000510099 ZKSCAN2Q63HK3 967 aa6.12□□□□□ -1.43
PDLIM5-214ENST00000510099 AEBP1Q8IUX7 1158 aa6.12□□□□□ -1.43
PDLIM5-214ENST00000510099 IGSF1Q8N6C5 1336 aa6.12□□□□□ -1.43
PDLIM5-214ENST00000510099 NGDNQ8NEJ9 315 aaKnown RBP6.12□□□□□ -1.43
PDLIM5-214ENST00000510099 PMFBP1Q8TBY8 1022 aa6.12□□□□□ -1.43
PDLIM5-214ENST00000510099 SSH1Q8WYL5 1049 aa6.12□□□□□ -1.43
PDLIM5-214ENST00000510099 FRAT1Q92837 279 aaPredicted RBP6.12□□□□□ -1.43
PDLIM5-214ENST00000510099 DNAJC5Q9H3Z4 198 aa6.12□□□□□ -1.43
PDLIM5-214ENST00000510099 TNNQ9UQP3 1299 aa6.12□□□□□ -1.43
PDLIM5-214ENST00000510099 COG6Q9Y2V7 657 aa6.12□□□□□ -1.43
PDLIM5-214ENST00000510099 SETD1BQ9UPS6 1966 aaKnown RBP6.11□□□□□ -1.43
PDLIM5-214ENST00000510099 LRRC37A3O60309 1634 aa6.11□□□□□ -1.43
PDLIM5-214ENST00000510099 PYGBP11216 843 aa6.11□□□□□ -1.43
PDLIM5-214ENST00000510099 TRIM27P14373 513 aa6.11□□□□□ -1.43
PDLIM5-214ENST00000510099 PDE4AP27815 886 aa6.11□□□□□ -1.43
PDLIM5-214ENST00000510099 GNAI1P63096 354 aa6.11□□□□□ -1.43
PDLIM5-214ENST00000510099 MVPQ14764 893 aaKnown RBP6.11□□□□□ -1.43
PDLIM5-214ENST00000510099 HSP90AB2PQ58FF8 381 aa6.11□□□□□ -1.43
PDLIM5-214ENST00000510099 DZIP1LQ8IYY4 767 aaKnown RBP6.11□□□□□ -1.43
PDLIM5-214ENST00000510099 BACH2Q9BYV9 841 aa6.11□□□□□ -1.43
PDLIM5-214ENST00000510099 EMP3P54852 163 aa6.1□□□□□ -1.43
PDLIM5-214ENST00000510099 DCAF8Q5TAQ9 597 aa6.1□□□□□ -1.43
PDLIM5-214ENST00000510099 SULT6B1Q6IMI4 303 aa6.1□□□□□ -1.43
PDLIM5-214ENST00000510099 ATF7IPQ6VMQ6 1270 aa6.1□□□□□ -1.43
PDLIM5-214ENST00000510099 SKAP1Q86WV1 359 aa6.1□□□□□ -1.43
PDLIM5-214ENST00000510099 FTSJ3Q8IY81 847 aaKnown RBP6.1□□□□□ -1.43
PDLIM5-214ENST00000510099 CFAP44Q96MT7 982 aa6.1□□□□□ -1.43
PDLIM5-214ENST00000510099 THUMPD2Q9BTF0 503 aaKnown RBP6.1□□□□□ -1.43
PDLIM5-214ENST00000510099 MBIPQ9NS73 344 aa6.1□□□□□ -1.43
PDLIM5-214ENST00000510099 PCDHB8Q9UN66 801 aa6.1□□□□□ -1.43
PDLIM5-214ENST00000510099 PHF8Q9UPP1 1060 aa6.1□□□□□ -1.43
PDLIM5-214ENST00000510099 SLIT3O75094 1523 aa6.09□□□□□ -1.43
PDLIM5-214ENST00000510099 CRB1P82279 1406 aa6.09□□□□□ -1.43
PDLIM5-214ENST00000510099 MST1RQ04912 1400 aa6.09□□□□□ -1.43
PDLIM5-214ENST00000510099 KIAA0232Q92628 1395 aa6.09□□□□□ -1.43
PDLIM5-214ENST00000510099 RGPD8O14715 1765 aaPredicted RBP6.09□□□□□ -1.43
PDLIM5-214ENST00000510099 IGHDP01880 384 aa6.09□□□□□ -1.43
PDLIM5-214ENST00000510099 ANP32AP39687 249 aaKnown RBP6.09□□□□□ -1.43
PDLIM5-214ENST00000510099 DDX19BQ9UMR2 479 aa6.09□□□□□ -1.43
PDLIM5-214ENST00000510099 PCDHB15Q9Y5E8 787 aa6.09□□□□□ -1.43
PDLIM5-214ENST00000510099 PHRF1Q9P1Y6 1649 aaKnown RBP6.09□□□□□ -1.43
PDLIM5-214ENST00000510099 DCCP43146 1447 aa6.08□□□□□ -1.44
PDLIM5-214ENST00000510099 KIF1AQ12756 1690 aa6.08□□□□□ -1.44
PDLIM5-214ENST00000510099 ABCC4O15439 1325 aa6.08□□□□□ -1.44
PDLIM5-214ENST00000510099 DLG5Q8TDM6 1919 aa6.08□□□□□ -1.44
PDLIM5-214ENST00000510099 FAM83GA6ND36 823 aa6.08□□□□□ -1.44
PDLIM5-214ENST00000510099 SOX12O15370 315 aa6.08□□□□□ -1.44
PDLIM5-214ENST00000510099 IPO8O15397 1037 aaKnown RBP6.08□□□□□ -1.44
PDLIM5-214ENST00000510099 VAMP4O75379 141 aa6.08□□□□□ -1.44
PDLIM5-214ENST00000510099 HOXC9P31274 260 aa6.08□□□□□ -1.44
PDLIM5-214ENST00000510099 AMPHP49418 695 aa6.08□□□□□ -1.44
PDLIM5-214ENST00000510099 NLRP6P59044 892 aa6.08□□□□□ -1.44
PDLIM5-214ENST00000510099 C8orf34Q49A92 452 aa6.08□□□□□ -1.44
PDLIM5-214ENST00000510099 C3orf67Q6ZVT6 689 aa6.08□□□□□ -1.44
PDLIM5-214ENST00000510099 MRPL50Q8N5N7 158 aaKnown RBP6.08□□□□□ -1.44
PDLIM5-214ENST00000510099 ARHGAP45Q92619 1136 aa6.08□□□□□ -1.44
PDLIM5-214ENST00000510099 ANP32EQ9BTT0 268 aa6.08□□□□□ -1.44
PDLIM5-214ENST00000510099 NOB1Q9ULX3 412 aaKnown RBP6.08□□□□□ -1.44
PDLIM5-214ENST00000510099 C1orf167Q5SNV9 1468 aa6.08□□□□□ -1.44
PDLIM5-214ENST00000510099 RGS12O14924 1447 aa6.08□□□□□ -1.44
PDLIM5-214ENST00000510099 NCAPD2Q15021 1401 aa6.08□□□□□ -1.44
PDLIM5-214ENST00000510099 MSH6P52701 1360 aa6.07□□□□□ -1.44
PDLIM5-214ENST00000510099 USP19O94966 1318 aa6.07□□□□□ -1.44
PDLIM5-214ENST00000510099 CHL1O00533 1208 aa6.07□□□□□ -1.44
PDLIM5-214ENST00000510099 HDAC1Q13547 482 aaPredicted RBP6.07□□□□□ -1.44
PDLIM5-214ENST00000510099 TWISTNBQ3B726 338 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms