RNA–Protein interactions for RNA: ENST00000509903.5

CAST-228, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-228ENST00000509903 DLC1Q96QB1 1528 aa9.6□□□□□ -0.87
CAST-228ENST00000509903 DIAPH1O60610 1272 aaKnown RBP9.6□□□□□ -0.87
CAST-228ENST00000509903 AAMPQ13685 434 aa9.6□□□□□ -0.87
CAST-228ENST00000509903 PLSCR2Q9NRY7 297 aa9.6□□□□□ -0.87
CAST-228ENST00000509903 PITPNM1O00562 1244 aa9.59□□□□□ -0.87
CAST-228ENST00000509903 WAPLQ7Z5K2 1190 aa9.59□□□□□ -0.87
CAST-228ENST00000509903 PCMTD1Q96MG8 357 aaPredicted RBP9.59□□□□□ -0.87
CAST-228ENST00000509903 PNNQ9H307 717 aaKnown RBP9.59□□□□□ -0.87
CAST-228ENST00000509903 KIF20BQ96Q89 1820 aa9.59□□□□□ -0.87
CAST-228ENST00000509903 KIF13AQ9H1H9 1805 aa9.59□□□□□ -0.87
CAST-228ENST00000509903 IGHDP01880 384 aa9.58□□□□□ -0.88
CAST-228ENST00000509903 CT47B1P0C2W7 299 aaPredicted RBP9.58□□□□□ -0.88
CAST-228ENST00000509903 TMPOP42166 694 aaKnown RBP9.58□□□□□ -0.88
CAST-228ENST00000509903 DSG2Q14126 1118 aa9.58□□□□□ -0.88
CAST-228ENST00000509903 AKT1S1Q96B36 256 aa9.58□□□□□ -0.88
CAST-228ENST00000509903 PLEKHF1Q96S99 279 aa9.58□□□□□ -0.88
CAST-228ENST00000509903 PRIM1P49642 420 aaKnown RBP9.58□□□□□ -0.88
CAST-228ENST00000509903 C8orf34Q49A92 452 aa9.58□□□□□ -0.88
CAST-228ENST00000509903 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.58□□□□□ -0.88
CAST-228ENST00000509903 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.58□□□□□ -0.88
CAST-228ENST00000509903 PMFBP1Q8TBY8 1022 aa9.58□□□□□ -0.88
CAST-228ENST00000509903 ATP7BP35670 1465 aa9.58□□□□□ -0.88
CAST-228ENST00000509903 GNPATO15228 680 aa9.57□□□□□ -0.88
CAST-228ENST00000509903 NEFMP07197 916 aa9.57□□□□□ -0.88
CAST-228ENST00000509903 FTSJ3Q8IY81 847 aaKnown RBP9.57□□□□□ -0.88
CAST-228ENST00000509903 TSR2Q969E8 191 aaKnown RBP9.57□□□□□ -0.88
CAST-228ENST00000509903 SERPINA10Q9UK55 444 aa9.57□□□□□ -0.88
CAST-228ENST00000509903 CARNS1A5YM72 827 aa9.57□□□□□ -0.88
CAST-228ENST00000509903 PPM1GO15355 546 aaPredicted RBP9.57□□□□□ -0.88
CAST-228ENST00000509903 RLBP1P12271 317 aa9.57□□□□□ -0.88
CAST-228ENST00000509903 SETD1AO15047 1707 aaKnown RBP9.56□□□□□ -0.88
CAST-228ENST00000509903 PNPLA6Q8IY17 1366 aa9.56□□□□□ -0.88
CAST-228ENST00000509903 RIPK4P57078 832 aa9.56□□□□□ -0.88
CAST-228ENST00000509903 ZKSCAN2Q63HK3 967 aa9.56□□□□□ -0.88
CAST-228ENST00000509903 GPHNQ9NQX3 736 aaPredicted RBP9.56□□□□□ -0.88
CAST-228ENST00000509903 SMC4Q9NTJ3 1288 aa9.56□□□□□ -0.88
CAST-228ENST00000509903 IL16Q14005 1332 aa9.56□□□□□ -0.88
CAST-228ENST00000509903 HDGFP51858 240 aaKnown RBP9.56□□□□□ -0.88
CAST-228ENST00000509903 EXOSC9Q06265 439 aaKnown RBP9.56□□□□□ -0.88
CAST-228ENST00000509903 TRIM35Q9UPQ4 493 aa9.56□□□□□ -0.88
CAST-228ENST00000509903 TNNQ9UQP3 1299 aa9.56□□□□□ -0.88
CAST-228ENST00000509903 LAS1LQ9Y4W2 734 aaKnown RBP9.56□□□□□ -0.88
CAST-228ENST00000509903 ZMYM3Q14202 1370 aa9.55□□□□□ -0.88
CAST-228ENST00000509903 DZIP1LQ8IYY4 767 aaKnown RBP9.55□□□□□ -0.88
CAST-228ENST00000509903 WASLO00401 505 aaPredicted RBP9.54□□□□□ -0.88
CAST-228ENST00000509903 FCHSD2O94868 740 aa9.54□□□□□ -0.88
CAST-228ENST00000509903 OSBPP22059 807 aa9.54□□□□□ -0.88
CAST-228ENST00000509903 DEKP35659 375 aaKnown RBP9.54□□□□□ -0.88
CAST-228ENST00000509903 MVPQ14764 893 aaKnown RBP9.54□□□□□ -0.88
CAST-228ENST00000509903 FARP1Q9Y4F1 1045 aaPredicted RBP9.54□□□□□ -0.88
CAST-228ENST00000509903 PPIP5K1Q6PFW1 1433 aa9.54□□□□□ -0.88
CAST-228ENST00000509903 METP08581 1390 aa9.54□□□□□ -0.88
CAST-228ENST00000509903 TXNDC2Q86VQ3 553 aa9.54□□□□□ -0.88
CAST-228ENST00000509903 RWDD1Q9H446 243 aaPredicted RBP9.54□□□□□ -0.88
CAST-228ENST00000509903 SNRKQ9NRH2 765 aa9.54□□□□□ -0.88
CAST-228ENST00000509903 POLKQ9UBT6 870 aa9.54□□□□□ -0.88
CAST-228ENST00000509903 PCDHB15Q9Y5E8 787 aa9.54□□□□□ -0.88
CAST-228ENST00000509903 EDC4Q6P2E9 1401 aaKnown RBP9.54□□□□□ -0.88
CAST-228ENST00000509903 NRXN3Q9Y4C0 1643 aa9.53□□□□□ -0.88
CAST-228ENST00000509903 PRKAR2BP31323 418 aa9.53□□□□□ -0.88
CAST-228ENST00000509903 POLR3EQ9NVU0 708 aa9.53□□□□□ -0.88
CAST-228ENST00000509903 CDC42BPGQ6DT37 1551 aa9.53□□□□□ -0.88
CAST-228ENST00000509903 LRRC7Q96NW7 1537 aa9.53□□□□□ -0.88
CAST-228ENST00000509903 PHOX2BQ99453 314 aa9.53□□□□□ -0.88
CAST-228ENST00000509903 TNRQ92752 1358 aa9.52□□□□□ -0.88
CAST-228ENST00000509903 FBLN1P23142 703 aa9.52□□□□□ -0.89
CAST-228ENST00000509903 SSH1Q8WYL5 1049 aa9.52□□□□□ -0.89
CAST-228ENST00000509903 KIF12Q96FN5 646 aa9.52□□□□□ -0.89
CAST-228ENST00000509903 CPSF1Q10570 1443 aaKnown RBP9.52□□□□□ -0.89
CAST-228ENST00000509903 MAP2P11137 1827 aaKnown RBP9.52□□□□□ -0.89
CAST-228ENST00000509903 VIRMAQ69YN4 1812 aaKnown RBP9.52□□□□□ -0.89
CAST-228ENST00000509903 FAM135BQ49AJ0 1406 aa9.51□□□□□ -0.89
CAST-228ENST00000509903 TRIM27P14373 513 aa9.51□□□□□ -0.89
CAST-228ENST00000509903 NME9Q86XW9 330 aa9.51□□□□□ -0.89
CAST-228ENST00000509903 ITPRIPQ8IWB1 547 aa9.51□□□□□ -0.89
CAST-228ENST00000509903 NUDT16Q96DE0 195 aaKnown RBP9.51□□□□□ -0.89
CAST-228ENST00000509903 KIF16BQ96L93 1317 aa9.51□□□□□ -0.89
CAST-228ENST00000509903 HMOX1P09601 288 aa9.51□□□□□ -0.89
CAST-228ENST00000509903 SH3D19Q5HYK7 790 aa9.51□□□□□ -0.89
CAST-228ENST00000509903 ATF7IPQ6VMQ6 1270 aa9.51□□□□□ -0.89
CAST-228ENST00000509903 FBXW7Q969H0 707 aa9.51□□□□□ -0.89
CAST-228ENST00000509903 COG3Q96JB2 828 aa9.51□□□□□ -0.89
CAST-228ENST00000509903 DDX19BQ9UMR2 479 aa9.51□□□□□ -0.89
CAST-228ENST00000509903 EMILIN1Q9Y6C2 1016 aa9.51□□□□□ -0.89
CAST-228ENST00000509903 KNDC1Q76NI1 1749 aa9.51□□□□□ -0.89
CAST-228ENST00000509903 TECPR2O15040 1411 aa9.5□□□□□ -0.89
CAST-228ENST00000509903 SPDYE16A6NNV3 312 aaPredicted RBP9.5□□□□□ -0.89
CAST-228ENST00000509903 IPO8O15397 1037 aaKnown RBP9.5□□□□□ -0.89
CAST-228ENST00000509903 CALD1Q05682 793 aaKnown RBP9.5□□□□□ -0.89
CAST-228ENST00000509903 SIRT1Q96EB6 747 aa9.5□□□□□ -0.89
CAST-228ENST00000509903 USP35Q9P2H5 1018 aa9.5□□□□□ -0.89
CAST-228ENST00000509903 PDZRN3Q9UPQ7 1066 aa9.5□□□□□ -0.89
CAST-228ENST00000509903 CDK12Q9NYV4 1490 aaPredicted RBP9.5□□□□□ -0.89
CAST-228ENST00000509903 SLC4A3P48751 1232 aa9.5□□□□□ -0.89
CAST-228ENST00000509903 NFE2L2Q16236 605 aa9.5□□□□□ -0.89
CAST-228ENST00000509903 NOB1Q9ULX3 412 aaKnown RBP9.5□□□□□ -0.89
CAST-228ENST00000509903 TMEM2Q9UHN6 1383 aa9.5□□□□□ -0.89
CAST-228ENST00000509903 CPS1P31327 1500 aa9.49□□□□□ -0.89
CAST-228ENST00000509903 AATKQ6ZMQ8 1374 aa9.49□□□□□ -0.89
CAST-228ENST00000509903 NLRP7Q8WX94 980 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms