RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 NHSQ6T4R5 1651 aa21.3■■□□□ 1
TPM3-219ENST00000509409 SLC27A3Q5K4L6 730 aa21.29■■□□□ 1
TPM3-219ENST00000509409 MTFR1LQ9H019 292 aa21.29■■□□□ 1
TPM3-219ENST00000509409 CGNL1Q0VF96 1302 aa21.29■■□□□ 1
TPM3-219ENST00000509409 INSRP06213 1382 aa21.28■■□□□ 1
TPM3-219ENST00000509409 PTGER2P43116 358 aa21.28■■□□□ 1
TPM3-219ENST00000509409 EMILIN1Q9Y6C2 1016 aa21.28■■□□□ 1
TPM3-219ENST00000509409 FLT4P35916 1363 aa21.27■■□□□ 1
TPM3-219ENST00000509409 ZNF827Q17R98 1081 aa21.27■■□□□ 1
TPM3-219ENST00000509409 MEGF6O75095 1541 aa21.26■□□□□ 0.99
TPM3-219ENST00000509409 FAM208AQ9UK61 1670 aaKnown RBP21.26■□□□□ 0.99
TPM3-219ENST00000509409 KCNQ4P56696 695 aa21.26■□□□□ 0.99
TPM3-219ENST00000509409 EIF4G2P78344 907 aaKnown RBP eCLIP21.26■□□□□ 0.99
TPM3-219ENST00000509409 KIF24Q5T7B8 1368 aa21.24■□□□□ 0.99
TPM3-219ENST00000509409 YY1P25490 414 aa21.24■□□□□ 0.99
TPM3-219ENST00000509409 AKT1S1Q96B36 256 aa21.24■□□□□ 0.99
TPM3-219ENST00000509409 TFCP2L1Q9NZI6 479 aa21.24■□□□□ 0.99
TPM3-219ENST00000509409 HSPA5P11021 654 aaKnown RBP21.23■□□□□ 0.99
TPM3-219ENST00000509409 BTAF1O14981 1849 aa21.22■□□□□ 0.99
TPM3-219ENST00000509409 FHDC1Q9C0D6 1143 aaPredicted RBP21.22■□□□□ 0.99
TPM3-219ENST00000509409 CCNL1Q9UK58 526 aaPredicted RBP21.22■□□□□ 0.99
TPM3-219ENST00000509409 CASZ1Q86V15 1759 aa21.22■□□□□ 0.99
TPM3-219ENST00000509409 TNNT2P45379 298 aaPredicted RBP21.21■□□□□ 0.99
TPM3-219ENST00000509409 ARXQ96QS3 562 aa21.21■□□□□ 0.99
TPM3-219ENST00000509409 PCDH11XQ9BZA7 1347 aa21.21■□□□□ 0.99
TPM3-219ENST00000509409 PCDH11YQ9BZA8 1340 aa21.21■□□□□ 0.99
TPM3-219ENST00000509409 SYT17Q9BSW7 474 aa21.2■□□□□ 0.98
TPM3-219ENST00000509409 RGPD2P0DJD1 1756 aa21.2■□□□□ 0.98
TPM3-219ENST00000509409 SLC16A10Q8TF71 515 aa21.19■□□□□ 0.98
TPM3-219ENST00000509409 SGIP1Q9BQI5 828 aa21.19■□□□□ 0.98
TPM3-219ENST00000509409 WASHC2AQ641Q2 1341 aa21.19■□□□□ 0.98
TPM3-219ENST00000509409 MSH5O43196 834 aa21.18■□□□□ 0.98
TPM3-219ENST00000509409 MPRIPQ6WCQ1 1025 aa21.18■□□□□ 0.98
TPM3-219ENST00000509409 PANK3Q9H999 370 aa21.18■□□□□ 0.98
TPM3-219ENST00000509409 POLKQ9UBT6 870 aa21.18■□□□□ 0.98
TPM3-219ENST00000509409 NSD2O96028 1365 aa21.18■□□□□ 0.98
TPM3-219ENST00000509409 KIF20BQ96Q89 1820 aa21.18■□□□□ 0.98
TPM3-219ENST00000509409 POLD1P28340 1107 aa21.17■□□□□ 0.98
TPM3-219ENST00000509409 SPG7Q9UQ90 795 aa21.17■□□□□ 0.98
TPM3-219ENST00000509409 PNPLA7Q6ZV29 1317 aa21.16■□□□□ 0.98
TPM3-219ENST00000509409 CYP27B1O15528 508 aa21.16■□□□□ 0.98
TPM3-219ENST00000509409 EYA1Q99502 592 aa21.16■□□□□ 0.98
TPM3-219ENST00000509409 KLHL34Q8N239 644 aa21.15■□□□□ 0.98
TPM3-219ENST00000509409 MYOM1P52179 1685 aa21.14■□□□□ 0.97
TPM3-219ENST00000509409 PAPPAQ13219 1627 aa21.14■□□□□ 0.97
TPM3-219ENST00000509409 HMGB2P26583 209 aaKnown RBP21.13■□□□□ 0.97
TPM3-219ENST00000509409 DOT1LQ8TEK3 1739 aa21.12■□□□□ 0.97
TPM3-219ENST00000509409 EIF4A2Q14240 407 aaKnown RBP21.11■□□□□ 0.97
TPM3-219ENST00000509409 SMARCC1Q92922 1105 aaPredicted RBP21.11■□□□□ 0.97
TPM3-219ENST00000509409 PALLDQ8WX93 1383 aa21.1■□□□□ 0.97
TPM3-219ENST00000509409 NKX1-1Q15270 411 aaPredicted RBP21.09■□□□□ 0.97
TPM3-219ENST00000509409 MORC1Q86VD1 984 aa21.09■□□□□ 0.97
TPM3-219ENST00000509409 COL23A1Q86Y22 540 aaPredicted RBP21.09■□□□□ 0.97
TPM3-219ENST00000509409 PIGBQ92521 554 aa21.09■□□□□ 0.97
TPM3-219ENST00000509409 SHANK3Q9BYB0 1731 aa21.09■□□□□ 0.97
TPM3-219ENST00000509409 IFNL2Q8IZJ0 200 aa21.08■□□□□ 0.97
TPM3-219ENST00000509409 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.08■□□□□ 0.975e-7■■■□□ 17.7
TPM3-219ENST00000509409 GPR162Q16538 588 aa21.07■□□□□ 0.96
TPM3-219ENST00000509409 KNSTRNQ9Y448 316 aa21.07■□□□□ 0.96
TPM3-219ENST00000509409 TMOD3Q9NYL9 352 aa21.06■□□□□ 0.96
TPM3-219ENST00000509409 PHKG2P15735 406 aa21.05■□□□□ 0.96
TPM3-219ENST00000509409 MSL1Q68DK7 614 aa21.05■□□□□ 0.96
TPM3-219ENST00000509409 PELP1Q8IZL8 1130 aaKnown RBP21.05■□□□□ 0.96
TPM3-219ENST00000509409 FLAD1Q8NFF5 587 aa21.05■□□□□ 0.96
TPM3-219ENST00000509409 AK7Q96M32 723 aa21.05■□□□□ 0.96
TPM3-219ENST00000509409 MAP2P11137 1827 aaKnown RBP21.04■□□□□ 0.96
TPM3-219ENST00000509409 NCAPD2Q15021 1401 aa21.04■□□□□ 0.96
TPM3-219ENST00000509409 MAP3K5Q99683 1374 aa21.03■□□□□ 0.96
TPM3-219ENST00000509409 LY75O60449 1722 aa21.03■□□□□ 0.96
TPM3-219ENST00000509409 PLEKHO1Q53GL0 409 aaPredicted RBP21.02■□□□□ 0.96
TPM3-219ENST00000509409 LOC102724428A0A0B4J2F2 783 aa21.01■□□□□ 0.95
TPM3-219ENST00000509409 SIK1P57059 783 aa21.01■□□□□ 0.95
TPM3-219ENST00000509409 ASAP1Q9ULH1 1129 aa21.01■□□□□ 0.95
TPM3-219ENST00000509409 PHF14O94880 888 aa21■□□□□ 0.95
TPM3-219ENST00000509409 IGSF1Q8N6C5 1336 aa21■□□□□ 0.95
TPM3-219ENST00000509409 ATP6V1AP38606 617 aa20.99■□□□□ 0.95
TPM3-219ENST00000509409 NLGN2Q8NFZ4 835 aa20.99■□□□□ 0.95
TPM3-219ENST00000509409 HSP90AB1P08238 724 aaKnown RBP20.98■□□□□ 0.95
TPM3-219ENST00000509409 AMOTQ4VCS5 1084 aa20.98■□□□□ 0.95
TPM3-219ENST00000509409 ZNF530Q6P9A1 599 aaPredicted RBP20.97■□□□□ 0.95
TPM3-219ENST00000509409 SMIM5Q71RC9 77 aa20.97■□□□□ 0.95
TPM3-219ENST00000509409 ATG3Q9NT62 314 aa20.97■□□□□ 0.95
TPM3-219ENST00000509409 QSER1Q2KHR3 1735 aa20.97■□□□□ 0.95
TPM3-219ENST00000509409 PKD1L3Q7Z443 1732 aa20.96■□□□□ 0.95
TPM3-219ENST00000509409 ANKRD26Q9UPS8 1709 aa20.96■□□□□ 0.95
TPM3-219ENST00000509409 ERVV-2B6SEH9 535 aa20.96■□□□□ 0.95
TPM3-219ENST00000509409 LINC00116Q8NCU8 138 aa20.96■□□□□ 0.95
TPM3-219ENST00000509409 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.95■□□□□ 0.94
TPM3-219ENST00000509409 SULT6B1Q6IMI4 303 aa20.95■□□□□ 0.94
TPM3-219ENST00000509409 ZNF784Q8NCA9 323 aaPredicted RBP20.95■□□□□ 0.94
TPM3-219ENST00000509409 DCAF5Q96JK2 942 aa20.95■□□□□ 0.94
TPM3-219ENST00000509409 RBM42Q9BTD8 480 aaKnown RBP20.95■□□□□ 0.94
TPM3-219ENST00000509409 KIF7Q2M1P5 1343 aa20.95■□□□□ 0.94
TPM3-219ENST00000509409 CABP4P57796 275 aa20.94■□□□□ 0.94
TPM3-219ENST00000509409 ITPK1Q13572 414 aa20.94■□□□□ 0.94
TPM3-219ENST00000509409 C1orf141Q5JVX7 400 aa20.94■□□□□ 0.94
TPM3-219ENST00000509409 AEBP1Q8IUX7 1158 aa20.94■□□□□ 0.94
TPM3-219ENST00000509409 UTRNP46939 3433 aa20.93■□□□□ 0.94
TPM3-219ENST00000509409 TUBGCP6Q96RT7 1819 aa20.93■□□□□ 0.94
TPM3-219ENST00000509409 GNPATO15228 680 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms