RNA–Protein interactions for RNA: ENST00000509177.1

TUSC3-208, Transcript of tumor suppressor candidate 3, humanhuman

TSL 2

Gene TUSC3, Length 493 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-208ENST00000509177 AMPHP49418 695 aa15.05■□□□□ -0
TUSC3-208ENST00000509177 EIF4G2P78344 907 aaKnown RBP eCLIP15.04■□□□□ -0
TUSC3-208ENST00000509177 GPR162Q16538 588 aa15.04■□□□□ -0
TUSC3-208ENST00000509177 IP6K1Q92551 441 aa15.04■□□□□ -0
TUSC3-208ENST00000509177 GGNBP2Q9H3C7 697 aa15.04■□□□□ -0
TUSC3-208ENST00000509177 CEP350Q5VT06 3117 aa15.03■□□□□ -0
TUSC3-208ENST00000509177 PNPLA7Q6ZV29 1317 aa15.03■□□□□ -0
TUSC3-208ENST00000509177 DDX54Q8TDD1 881 aaKnown RBP15.03■□□□□ -0
TUSC3-208ENST00000509177 COL24A1Q17RW2 1714 aa15.03■□□□□ -0
TUSC3-208ENST00000509177 QSER1Q2KHR3 1735 aa15.03■□□□□ -0
TUSC3-208ENST00000509177 FYB1O15117 783 aa15.02■□□□□ -0
TUSC3-208ENST00000509177 FBLN1P23142 703 aa15.02■□□□□ -0
TUSC3-208ENST00000509177 KCNQ4P56696 695 aa15.02■□□□□ -0
TUSC3-208ENST00000509177 SLC27A3Q5K4L6 730 aa15.02■□□□□ -0
TUSC3-208ENST00000509177 SLC16A10Q8TF71 515 aa15.02■□□□□ -0
TUSC3-208ENST00000509177 KLHL34Q8N239 644 aa15.01□□□□□ -0.01
TUSC3-208ENST00000509177 MAP3K19Q56UN5 1328 aa15□□□□□ -0.01
TUSC3-208ENST00000509177 POLD1P28340 1107 aa15□□□□□ -0.01
TUSC3-208ENST00000509177 RRS1Q15050 365 aaKnown RBP15□□□□□ -0.01
TUSC3-208ENST00000509177 TFCP2L1Q9NZI6 479 aa15□□□□□ -0.01
TUSC3-208ENST00000509177 TUBGCP6Q96RT7 1819 aa15□□□□□ -0.01
TUSC3-208ENST00000509177 MSH5O43196 834 aa14.99□□□□□ -0.01
TUSC3-208ENST00000509177 HSPA5P11021 654 aaKnown RBP14.99□□□□□ -0.01
TUSC3-208ENST00000509177 HOXC9P31274 260 aa14.99□□□□□ -0.01
TUSC3-208ENST00000509177 PRIM1P49642 420 aaKnown RBP14.99□□□□□ -0.01
TUSC3-208ENST00000509177 NLGN2Q8NFZ4 835 aa14.99□□□□□ -0.01
TUSC3-208ENST00000509177 NSD2O96028 1365 aa14.98□□□□□ -0.01
TUSC3-208ENST00000509177 PELP1Q8IZL8 1130 aaKnown RBP14.98□□□□□ -0.01
TUSC3-208ENST00000509177 SYTL4Q96C24 671 aaPredicted RBP14.98□□□□□ -0.01
TUSC3-208ENST00000509177 FAM208AQ9UK61 1670 aaKnown RBP14.97□□□□□ -0.01
TUSC3-208ENST00000509177 CARD14Q9BXL6 1004 aa14.97□□□□□ -0.01
TUSC3-208ENST00000509177 LY75O60449 1722 aa14.97□□□□□ -0.01
TUSC3-208ENST00000509177 DOT1LQ8TEK3 1739 aa14.97□□□□□ -0.01
TUSC3-208ENST00000509177 GIGYF1O75420 1035 aaPredicted RBP14.96□□□□□ -0.01
TUSC3-208ENST00000509177 SHANK3Q9BYB0 1731 aa14.96□□□□□ -0.01
TUSC3-208ENST00000509177 NSD3Q9BZ95 1437 aa14.96□□□□□ -0.01
TUSC3-208ENST00000509177 CGNL1Q0VF96 1302 aa14.95□□□□□ -0.02
TUSC3-208ENST00000509177 YBX3P16989 372 aaKnown RBP eCLIP14.95□□□□□ -0.025e-6■■□□□ 13
TUSC3-208ENST00000509177 MEGF6O75095 1541 aa14.94□□□□□ -0.02
TUSC3-208ENST00000509177 PPM1GO15355 546 aaPredicted RBP14.94□□□□□ -0.02
TUSC3-208ENST00000509177 RGPD2P0DJD1 1756 aa14.93□□□□□ -0.02
TUSC3-208ENST00000509177 SMG6Q86US8 1419 aaKnown RBP14.93□□□□□ -0.02
TUSC3-208ENST00000509177 COL23A1Q86Y22 540 aaPredicted RBP14.93□□□□□ -0.02
TUSC3-208ENST00000509177 ZCRB1Q8TBF4 217 aaKnown RBP14.93□□□□□ -0.02
TUSC3-208ENST00000509177 CCNL1Q9UK58 526 aaPredicted RBP14.93□□□□□ -0.02
TUSC3-208ENST00000509177 RTL1A6NKG5 1358 aa14.93□□□□□ -0.02
TUSC3-208ENST00000509177 HSP90AB2PQ58FF8 381 aa14.92□□□□□ -0.02
TUSC3-208ENST00000509177 NBPF6Q5VWK0 638 aa14.91□□□□□ -0.02
TUSC3-208ENST00000509177 USHBP1Q8N6Y0 703 aa14.91□□□□□ -0.02
TUSC3-208ENST00000509177 RAPGEF4Q8WZA2 1011 aa14.91□□□□□ -0.02
TUSC3-208ENST00000509177 NBPF4Q96M43 638 aa14.91□□□□□ -0.02
TUSC3-208ENST00000509177 PANK3Q9H999 370 aa14.91□□□□□ -0.02
TUSC3-208ENST00000509177 GRIN3BO60391 1043 aa14.9□□□□□ -0.02
TUSC3-208ENST00000509177 TNNT2P45379 298 aaPredicted RBP14.9□□□□□ -0.02
TUSC3-208ENST00000509177 MSL1Q68DK7 614 aa14.9□□□□□ -0.02
TUSC3-208ENST00000509177 EMILIN1Q9Y6C2 1016 aa14.9□□□□□ -0.02
TUSC3-208ENST00000509177 FLT4P35916 1363 aa14.89□□□□□ -0.03
TUSC3-208ENST00000509177 INSRP06213 1382 aa14.88□□□□□ -0.03
TUSC3-208ENST00000509177 TATP17735 454 aaPredicted RBP14.88□□□□□ -0.03
TUSC3-208ENST00000509177 KIF24Q5T7B8 1368 aa14.87□□□□□ -0.03
TUSC3-208ENST00000509177 PPP4R3CPQ6ZMV5 832 aa14.87□□□□□ -0.03
TUSC3-208ENST00000509177 KIF20BQ96Q89 1820 aa14.87□□□□□ -0.03
TUSC3-208ENST00000509177 C5P01031 1676 aa14.87□□□□□ -0.03
TUSC3-208ENST00000509177 ATP10DQ9P241 1426 aa14.86□□□□□ -0.03
TUSC3-208ENST00000509177 IFFO2Q5TF58 517 aa14.86□□□□□ -0.03
TUSC3-208ENST00000509177 KNSTRNQ9Y448 316 aa14.85□□□□□ -0.03
TUSC3-208ENST00000509177 CD2APQ9Y5K6 639 aa14.85□□□□□ -0.03
TUSC3-208ENST00000509177 WASHC2AQ641Q2 1341 aa14.84□□□□□ -0.03
TUSC3-208ENST00000509177 PALLDQ8WX93 1383 aa14.84□□□□□ -0.03
TUSC3-208ENST00000509177 TAF1LQ8IZX4 1826 aa14.83□□□□□ -0.04
TUSC3-208ENST00000509177 MORC1Q86VD1 984 aa14.83□□□□□ -0.04
TUSC3-208ENST00000509177 AMIGO3Q86WK7 504 aa14.83□□□□□ -0.04
TUSC3-208ENST00000509177 POLKQ9UBT6 870 aa14.83□□□□□ -0.04
TUSC3-208ENST00000509177 MPRIPQ6WCQ1 1025 aa14.82□□□□□ -0.04
TUSC3-208ENST00000509177 FLAD1Q8NFF5 587 aa14.82□□□□□ -0.04
TUSC3-208ENST00000509177 PCDH11XQ9BZA7 1347 aa14.82□□□□□ -0.04
TUSC3-208ENST00000509177 PCDH11YQ9BZA8 1340 aa14.82□□□□□ -0.04
TUSC3-208ENST00000509177 ADCY9O60503 1353 aa14.82□□□□□ -0.04
TUSC3-208ENST00000509177 CYP27B1O15528 508 aa14.81□□□□□ -0.04
TUSC3-208ENST00000509177 TOGARAM1Q9Y4F4 1720 aa14.8□□□□□ -0.04
TUSC3-208ENST00000509177 SMIM5Q71RC9 77 aa14.8□□□□□ -0.04
TUSC3-208ENST00000509177 EYA1Q99502 592 aa14.8□□□□□ -0.04
TUSC3-208ENST00000509177 GPBP1L1Q9HC44 474 aaPredicted RBP14.8□□□□□ -0.04
TUSC3-208ENST00000509177 C4BP0C0L5 1744 aa14.8□□□□□ -0.04
TUSC3-208ENST00000509177 KIF7Q2M1P5 1343 aa14.79□□□□□ -0.04
TUSC3-208ENST00000509177 ZNF526Q8TF50 670 aaPredicted RBP14.79□□□□□ -0.04
TUSC3-208ENST00000509177 SPG7Q9UQ90 795 aa14.79□□□□□ -0.04
TUSC3-208ENST00000509177 ITGB4P16144 1822 aa14.78□□□□□ -0.04
TUSC3-208ENST00000509177 KCNA4P22459 653 aa14.78□□□□□ -0.04
TUSC3-208ENST00000509177 EIF4A2Q14240 407 aaKnown RBP14.78□□□□□ -0.04
TUSC3-208ENST00000509177 PIGBQ92521 554 aa14.78□□□□□ -0.04
TUSC3-208ENST00000509177 AK7Q96M32 723 aa14.78□□□□□ -0.04
TUSC3-208ENST00000509177 WWC3Q9ULE0 1092 aa14.78□□□□□ -0.04
TUSC3-208ENST00000509177 UBR3Q6ZT12 1888 aa14.78□□□□□ -0.04
TUSC3-208ENST00000509177 IGSF1Q8N6C5 1336 aa14.77□□□□□ -0.04
TUSC3-208ENST00000509177 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.77□□□□□ -0.05
TUSC3-208ENST00000509177 PHF14O94880 888 aa14.77□□□□□ -0.05
TUSC3-208ENST00000509177 HMGB2P26583 209 aaKnown RBP14.77□□□□□ -0.05
TUSC3-208ENST00000509177 HSPA6P17066 643 aa14.76□□□□□ -0.05
TUSC3-208ENST00000509177 SMARCC1Q92922 1105 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms