RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 USHBP1Q8N6Y0 703 aa25.55■■□□□ 1.68
UBE3D-207ENST00000509102 KCNQ2O43526 872 aa25.54■■□□□ 1.68
UBE3D-207ENST00000509102 WASHC2AQ641Q2 1341 aa25.54■■□□□ 1.68
UBE3D-207ENST00000509102 MEGF6O75095 1541 aa25.53■■□□□ 1.68
UBE3D-207ENST00000509102 PIAS4Q8N2W9 510 aaPredicted RBP25.53■■□□□ 1.68
UBE3D-207ENST00000509102 KIF7Q2M1P5 1343 aa25.53■■□□□ 1.68
UBE3D-207ENST00000509102 POLKQ9UBT6 870 aa25.52■■□□□ 1.68
UBE3D-207ENST00000509102 MORC1Q86VD1 984 aa25.51■■□□□ 1.67
UBE3D-207ENST00000509102 LRP5O75197 1615 aa25.5■■□□□ 1.67
UBE3D-207ENST00000509102 MAP2P11137 1827 aaKnown RBP25.5■■□□□ 1.67
UBE3D-207ENST00000509102 TXNRD1Q16881 649 aa25.5■■□□□ 1.67
UBE3D-207ENST00000509102 SYTL4Q96C24 671 aaPredicted RBP25.49■■□□□ 1.67
UBE3D-207ENST00000509102 KAT6BQ8WYB5 2073 aa25.49■■□□□ 1.67
UBE3D-207ENST00000509102 PCDH11XQ9BZA7 1347 aa25.48■■□□□ 1.67
UBE3D-207ENST00000509102 PCDH11YQ9BZA8 1340 aa25.48■■□□□ 1.67
UBE3D-207ENST00000509102 PROM2Q8N271 834 aa25.45■■□□□ 1.66
UBE3D-207ENST00000509102 STK32BQ9NY57 414 aa25.45■■□□□ 1.66
UBE3D-207ENST00000509102 BTAF1O14981 1849 aa25.44■■□□□ 1.66
UBE3D-207ENST00000509102 PRIM1P49642 420 aaKnown RBP25.43■■□□□ 1.66
UBE3D-207ENST00000509102 EYA1Q99502 592 aa25.42■■□□□ 1.66
UBE3D-207ENST00000509102 SPG7Q9UQ90 795 aa25.42■■□□□ 1.66
UBE3D-207ENST00000509102 SHANK3Q9BYB0 1731 aa25.41■■□□□ 1.66
UBE3D-207ENST00000509102 EIF4A2Q14240 407 aaKnown RBP25.41■■□□□ 1.66
UBE3D-207ENST00000509102 DOT1LQ8TEK3 1739 aa25.4■■□□□ 1.66
UBE3D-207ENST00000509102 NCAPD2Q15021 1401 aa25.4■■□□□ 1.66
UBE3D-207ENST00000509102 ANO8Q9HCE9 1232 aaPredicted RBP25.4■■□□□ 1.66
UBE3D-207ENST00000509102 ADRA2BP18089 450 aa25.39■■□□□ 1.66
UBE3D-207ENST00000509102 AMER1Q5JTC6 1135 aaPredicted RBP25.38■■□□□ 1.65
UBE3D-207ENST00000509102 SLC27A3Q5K4L6 730 aa25.38■■□□□ 1.65
UBE3D-207ENST00000509102 SLC15A2Q16348 729 aa25.37■■□□□ 1.65
UBE3D-207ENST00000509102 SPON1Q9HCB6 807 aa25.37■■□□□ 1.65
UBE3D-207ENST00000509102 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.37■■□□□ 1.65
UBE3D-207ENST00000509102 PLEKHG2Q9H7P9 1386 aa25.35■■□□□ 1.65
UBE3D-207ENST00000509102 PKD1L3Q7Z443 1732 aa25.34■■□□□ 1.65
UBE3D-207ENST00000509102 CYP27B1O15528 508 aa25.34■■□□□ 1.65
UBE3D-207ENST00000509102 HMGB2P26583 209 aaKnown RBP25.33■■□□□ 1.65
UBE3D-207ENST00000509102 POTEDQ86YR6 584 aa25.33■■□□□ 1.65
UBE3D-207ENST00000509102 PPP1R1BQ9UD71 204 aaPredicted RBP25.33■■□□□ 1.65
UBE3D-207ENST00000509102 IGSF1Q8N6C5 1336 aa25.33■■□□□ 1.64
UBE3D-207ENST00000509102 PER1O15534 1290 aaPredicted RBP25.31■■□□□ 1.64
UBE3D-207ENST00000509102 CC2D1BQ5T0F9 858 aaKnown RBP25.31■■□□□ 1.64
UBE3D-207ENST00000509102 IFNL2Q8IZJ0 200 aa25.31■■□□□ 1.64
UBE3D-207ENST00000509102 MPRIPQ6WCQ1 1025 aa25.3■■□□□ 1.64
UBE3D-207ENST00000509102 LRRC4BQ9NT99 713 aa25.29■■□□□ 1.64
UBE3D-207ENST00000509102 CCNL1Q9UK58 526 aaPredicted RBP25.29■■□□□ 1.64
UBE3D-207ENST00000509102 NKX1-1Q15270 411 aaPredicted RBP25.28■■□□□ 1.64
UBE3D-207ENST00000509102 PAPPAQ13219 1627 aa25.27■■□□□ 1.64
UBE3D-207ENST00000509102 PLEKHO1Q53GL0 409 aaPredicted RBP25.27■■□□□ 1.64
UBE3D-207ENST00000509102 SMARCC1Q92922 1105 aaPredicted RBP25.27■■□□□ 1.64
UBE3D-207ENST00000509102 NPC1L1Q9UHC9 1359 aa25.27■■□□□ 1.64
UBE3D-207ENST00000509102 CASZ1Q86V15 1759 aa25.26■■□□□ 1.63
UBE3D-207ENST00000509102 PHKG2P15735 406 aa25.26■■□□□ 1.63
UBE3D-207ENST00000509102 MTHFSP49914 203 aa25.26■■□□□ 1.63
UBE3D-207ENST00000509102 AMOTQ4VCS5 1084 aa25.26■■□□□ 1.63
UBE3D-207ENST00000509102 ZBTB7AO95365 584 aa25.25■■□□□ 1.63
UBE3D-207ENST00000509102 HSP90AB1P08238 724 aaKnown RBP25.25■■□□□ 1.63
UBE3D-207ENST00000509102 LY75O60449 1722 aa25.24■■□□□ 1.63
UBE3D-207ENST00000509102 CNGB1Q14028 1251 aaPredicted RBP25.24■■□□□ 1.63
UBE3D-207ENST00000509102 TMOD3Q9NYL9 352 aa25.24■■□□□ 1.63
UBE3D-207ENST00000509102 TFCP2L1Q9NZI6 479 aa25.24■■□□□ 1.63
UBE3D-207ENST00000509102 PALLDQ8WX93 1383 aa25.23■■□□□ 1.63
UBE3D-207ENST00000509102 ZNF827Q17R98 1081 aa25.23■■□□□ 1.63
UBE3D-207ENST00000509102 SULT6B1Q6IMI4 303 aa25.23■■□□□ 1.63
UBE3D-207ENST00000509102 PDGFDQ9GZP0 370 aaPredicted RBP25.23■■□□□ 1.63
UBE3D-207ENST00000509102 MTFR1LQ9H019 292 aa25.23■■□□□ 1.63
UBE3D-207ENST00000509102 IL13P35225 146 aa25.22■■□□□ 1.63
UBE3D-207ENST00000509102 AKT1S1Q96B36 256 aa25.22■■□□□ 1.63
UBE3D-207ENST00000509102 KCNQ4P56696 695 aa25.21■■□□□ 1.63
UBE3D-207ENST00000509102 C1orf141Q5JVX7 400 aa25.2■■□□□ 1.62
UBE3D-207ENST00000509102 ZNF530Q6P9A1 599 aaPredicted RBP25.2■■□□□ 1.62
UBE3D-207ENST00000509102 ATF5Q9Y2D1 282 aaPredicted RBP25.2■■□□□ 1.62
UBE3D-207ENST00000509102 TOGARAM1Q9Y4F4 1720 aa25.2■■□□□ 1.62
UBE3D-207ENST00000509102 DIAPH1O60610 1272 aaKnown RBP25.19■■□□□ 1.62
UBE3D-207ENST00000509102 AEBP1Q8IUX7 1158 aa25.19■■□□□ 1.62
UBE3D-207ENST00000509102 PIGBQ92521 554 aa25.19■■□□□ 1.62
UBE3D-207ENST00000509102 DCAF5Q96JK2 942 aa25.19■■□□□ 1.62
UBE3D-207ENST00000509102 ITGB4P16144 1822 aa25.19■■□□□ 1.62
UBE3D-207ENST00000509102 KDRP35968 1356 aa25.18■■□□□ 1.62
UBE3D-207ENST00000509102 SLC16A10Q8TF71 515 aa25.17■■□□□ 1.62
UBE3D-207ENST00000509102 ERVV-2B6SEH9 535 aa25.16■■□□□ 1.62
UBE3D-207ENST00000509102 DCAF8L1A6NGE4 600 aa25.15■■□□□ 1.62
UBE3D-207ENST00000509102 QSER1Q2KHR3 1735 aa25.14■■□□□ 1.61
UBE3D-207ENST00000509102 PNPLA7Q6ZV29 1317 aa25.13■■□□□ 1.61
UBE3D-207ENST00000509102 PTGER2P43116 358 aa25.13■■□□□ 1.61
UBE3D-207ENST00000509102 CFAP53Q96M91 514 aa25.13■■□□□ 1.61
UBE3D-207ENST00000509102 CABP4P57796 275 aa25.12■■□□□ 1.61
UBE3D-207ENST00000509102 FLAD1Q8NFF5 587 aa25.12■■□□□ 1.61
UBE3D-207ENST00000509102 C5P01031 1676 aa25.12■■□□□ 1.61
UBE3D-207ENST00000509102 LOC102724428A0A0B4J2F2 783 aa25.11■■□□□ 1.61
UBE3D-207ENST00000509102 HMOX1P09601 288 aa25.11■■□□□ 1.61
UBE3D-207ENST00000509102 POLD1P28340 1107 aa25.11■■□□□ 1.61
UBE3D-207ENST00000509102 SIK1P57059 783 aa25.11■■□□□ 1.61
UBE3D-207ENST00000509102 AK7Q96M32 723 aa25.11■■□□□ 1.61
UBE3D-207ENST00000509102 ASAP1Q9ULH1 1129 aa25.1■■□□□ 1.61
UBE3D-207ENST00000509102 U2SURPO15042 1029 aaKnown RBP25.09■■□□□ 1.61
UBE3D-207ENST00000509102 AKAP4Q5JQC9 854 aa25.08■■□□□ 1.61
UBE3D-207ENST00000509102 ARXQ96QS3 562 aa25.08■■□□□ 1.61
UBE3D-207ENST00000509102 ATG3Q9NT62 314 aa25.07■■□□□ 1.6
UBE3D-207ENST00000509102 KDM6AO15550 1401 aaPredicted RBP25.06■■□□□ 1.6
UBE3D-207ENST00000509102 ATP6V1AP38606 617 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms