RNA–Protein interactions for RNA: ENST00000509023.5

SNCAIP-211, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 1,972 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-211ENST00000509023 FNBP4Q8N3X1 1017 aaPredicted RBP19.44■□□□□ 0.7
SNCAIP-211ENST00000509023 BCL9LQ86UU0 1499 aa19.44■□□□□ 0.7
SNCAIP-211ENST00000509023 LMOD3Q0VAK6 560 aa19.44■□□□□ 0.7
SNCAIP-211ENST00000509023 PDE3BQ13370 1112 aa19.44■□□□□ 0.7
SNCAIP-211ENST00000509023 UNC5CLQ8IV45 518 aa19.44■□□□□ 0.7
SNCAIP-211ENST00000509023 PARP4Q9UKK3 1724 aaKnown RBP19.43■□□□□ 0.7
SNCAIP-211ENST00000509023 GOLGA2Q08379 1002 aa19.43■□□□□ 0.7
SNCAIP-211ENST00000509023 CDCA7LQ96GN5 454 aa19.43■□□□□ 0.7
SNCAIP-211ENST00000509023 PLEKHG2Q9H7P9 1386 aa19.43■□□□□ 0.7
SNCAIP-211ENST00000509023 OVOS2A0A0G2JMS6 1433 aa19.42■□□□□ 0.7
SNCAIP-211ENST00000509023 IL2RBP14784 551 aa19.42■□□□□ 0.7
SNCAIP-211ENST00000509023 ZNF530Q6P9A1 599 aaPredicted RBP19.41■□□□□ 0.7
SNCAIP-211ENST00000509023 WDR63Q8IWG1 891 aa19.41■□□□□ 0.7
SNCAIP-211ENST00000509023 USP21Q9UK80 565 aa19.41■□□□□ 0.7
SNCAIP-211ENST00000509023 MAP3K5Q99683 1374 aa19.41■□□□□ 0.7
SNCAIP-211ENST00000509023 SPATA31A1Q5TZJ5 1347 aa19.41■□□□□ 0.7
SNCAIP-211ENST00000509023 PKD1L3Q7Z443 1732 aa19.41■□□□□ 0.7
SNCAIP-211ENST00000509023 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.41■□□□□ 0.7
SNCAIP-211ENST00000509023 GNAT3A8MTJ3 354 aa19.4■□□□□ 0.7
SNCAIP-211ENST00000509023 DCTN1Q14203 1278 aa19.4■□□□□ 0.7
SNCAIP-211ENST00000509023 THUMPD2Q9BTF0 503 aaKnown RBP19.4■□□□□ 0.7
SNCAIP-211ENST00000509023 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.4■□□□□ 0.7
SNCAIP-211ENST00000509023 SPG7Q9UQ90 795 aa19.4■□□□□ 0.7
SNCAIP-211ENST00000509023 CCDC9Q9Y3X0 531 aaKnown RBP19.4■□□□□ 0.7
SNCAIP-211ENST00000509023 SPATA31A5Q5VU36 1347 aa19.39■□□□□ 0.7
SNCAIP-211ENST00000509023 SPATA31A7Q8IWB4 1347 aa19.39■□□□□ 0.7
SNCAIP-211ENST00000509023 RTF1Q92541 710 aaKnown RBP19.39■□□□□ 0.7
SNCAIP-211ENST00000509023 SPINK5Q9NQ38 1064 aaPredicted RBP19.39■□□□□ 0.7
SNCAIP-211ENST00000509023 AFF2P51816 1311 aa19.39■□□□□ 0.69
SNCAIP-211ENST00000509023 MCM10Q7L590 875 aa19.39■□□□□ 0.69
SNCAIP-211ENST00000509023 WNK3Q9BYP7 1800 aa19.38■□□□□ 0.69
SNCAIP-211ENST00000509023 VPS72Q15906 364 aa19.38■□□□□ 0.69
SNCAIP-211ENST00000509023 AKAP4Q5JQC9 854 aa19.38■□□□□ 0.69
SNCAIP-211ENST00000509023 C1orf141Q5JVX7 400 aa19.38■□□□□ 0.69
SNCAIP-211ENST00000509023 THRAP3Q9Y2W1 955 aaKnown RBP19.38■□□□□ 0.69
SNCAIP-211ENST00000509023 DISP2A7MBM2 1401 aa19.38■□□□□ 0.69
SNCAIP-211ENST00000509023 HTATSF1O43719 755 aaKnown RBP19.37■□□□□ 0.69
SNCAIP-211ENST00000509023 SLFN5Q08AF3 891 aa19.37■□□□□ 0.69
SNCAIP-211ENST00000509023 E9PSI1 815 aa19.37■□□□□ 0.69
SNCAIP-211ENST00000509023 CALD1Q05682 793 aaKnown RBP19.35■□□□□ 0.69
SNCAIP-211ENST00000509023 ZCRB1Q8TBF4 217 aaKnown RBP19.35■□□□□ 0.69
SNCAIP-211ENST00000509023 IL16Q14005 1332 aa19.35■□□□□ 0.69
SNCAIP-211ENST00000509023 PHKG2P15735 406 aa19.34■□□□□ 0.69
SNCAIP-211ENST00000509023 DUSP27Q5VZP5 1158 aa19.34■□□□□ 0.69
SNCAIP-211ENST00000509023 SHANK3Q9BYB0 1731 aa19.34■□□□□ 0.69
SNCAIP-211ENST00000509023 PCDH11XQ9BZA7 1347 aa19.34■□□□□ 0.69
SNCAIP-211ENST00000509023 PCDH11YQ9BZA8 1340 aa19.34■□□□□ 0.69
SNCAIP-211ENST00000509023 TRMT2AQ8IZ69 625 aaKnown RBP19.33■□□□□ 0.69
SNCAIP-211ENST00000509023 IFNL2Q8IZJ0 200 aa19.33■□□□□ 0.69
SNCAIP-211ENST00000509023 IL17REQ8NFR9 667 aa19.33■□□□□ 0.69
SNCAIP-211ENST00000509023 LRRC37A3O60309 1634 aa19.33■□□□□ 0.69
SNCAIP-211ENST00000509023 CYP27B1O15528 508 aa19.33■□□□□ 0.68
SNCAIP-211ENST00000509023 BARGINQ6ZT62 677 aa19.33■□□□□ 0.68
SNCAIP-211ENST00000509023 CDCA7Q9BWT1 371 aaPredicted RBP19.33■□□□□ 0.68
SNCAIP-211ENST00000509023 MPRIPQ6WCQ1 1025 aa19.32■□□□□ 0.68
SNCAIP-211ENST00000509023 MYH16Q9H6N6 1097 aa19.32■□□□□ 0.68
SNCAIP-211ENST00000509023 LAS1LQ9Y4W2 734 aaKnown RBP19.32■□□□□ 0.68
SNCAIP-211ENST00000509023 LGR6Q9HBX8 967 aa19.32■□□□□ 0.68
SNCAIP-211ENST00000509023 CEMIPQ8WUJ3 1361 aa19.31■□□□□ 0.68
SNCAIP-211ENST00000509023 ATRNO75882 1429 aa19.31■□□□□ 0.68
SNCAIP-211ENST00000509023 IFT57Q9NWB7 429 aa19.31■□□□□ 0.68
SNCAIP-211ENST00000509023 TRPC5Q9UL62 973 aaPredicted RBP19.31■□□□□ 0.68
SNCAIP-211ENST00000509023 VIRMAQ69YN4 1812 aaKnown RBP19.31■□□□□ 0.68
SNCAIP-211ENST00000509023 DDX54Q8TDD1 881 aaKnown RBP19.3■□□□□ 0.68
SNCAIP-211ENST00000509023 TSR2Q969E8 191 aaKnown RBP19.3■□□□□ 0.68
SNCAIP-211ENST00000509023 FANCIQ9NVI1 1328 aa19.3■□□□□ 0.68
SNCAIP-211ENST00000509023 RNMTO43148 476 aaKnown RBP19.3■□□□□ 0.68
SNCAIP-211ENST00000509023 GNAI1P63096 354 aa19.3■□□□□ 0.68
SNCAIP-211ENST00000509023 FAM98CQ17RN3 349 aaKnown RBP19.3■□□□□ 0.68
SNCAIP-211ENST00000509023 CFAP44Q96MT7 982 aa19.3■□□□□ 0.68
SNCAIP-211ENST00000509023 ADAMTS7Q9UKP4 1686 aa19.29■□□□□ 0.68
SNCAIP-211ENST00000509023 KDM6AO15550 1401 aaPredicted RBP19.29■□□□□ 0.68
SNCAIP-211ENST00000509023 TNS2Q63HR2 1409 aa19.29■□□□□ 0.68
SNCAIP-211ENST00000509023 EXOC5O00471 708 aa19.29■□□□□ 0.68
SNCAIP-211ENST00000509023 ZNF853P0CG23 659 aa19.29■□□□□ 0.68
SNCAIP-211ENST00000509023 GLI3P10071 1580 aa19.28■□□□□ 0.68
SNCAIP-211ENST00000509023 HSP90AB1P08238 724 aaKnown RBP19.28■□□□□ 0.68
SNCAIP-211ENST00000509023 GJD4Q96KN9 370 aaPredicted RBP19.28■□□□□ 0.68
SNCAIP-211ENST00000509023 SCN11AQ9UI33 1791 aa19.28■□□□□ 0.68
SNCAIP-211ENST00000509023 DDB1Q16531 1140 aa19.27■□□□□ 0.68
SNCAIP-211ENST00000509023 DCAF5Q96JK2 942 aa19.27■□□□□ 0.68
SNCAIP-211ENST00000509023 MBIPQ9NS73 344 aa19.27■□□□□ 0.68
SNCAIP-211ENST00000509023 QTRT2Q9H974 415 aaKnown RBP19.26■□□□□ 0.67
SNCAIP-211ENST00000509023 CHL1O00533 1208 aa19.26■□□□□ 0.67
SNCAIP-211ENST00000509023 TEFQ10587 303 aa19.26■□□□□ 0.67
SNCAIP-211ENST00000509023 NKX1-1Q15270 411 aaPredicted RBP19.25■□□□□ 0.67
SNCAIP-211ENST00000509023 TAF7Q15545 349 aaPredicted RBP19.24■□□□□ 0.67
SNCAIP-211ENST00000509023 MIS18AQ9NYP9 233 aa19.24■□□□□ 0.67
SNCAIP-211ENST00000509023 THSD7AQ9UPZ6 1657 aa19.24■□□□□ 0.67
SNCAIP-211ENST00000509023 A0A0G2JS52 829 aa19.24■□□□□ 0.67
SNCAIP-211ENST00000509023 MYT1Q01538 1121 aa19.24■□□□□ 0.67
SNCAIP-211ENST00000509023 ZNF772Q68DY9 489 aaPredicted RBP19.24■□□□□ 0.67
SNCAIP-211ENST00000509023 TSPYL4Q9UJ04 414 aa19.24■□□□□ 0.67
SNCAIP-211ENST00000509023 SIPA1L3O60292 1781 aaPredicted RBP19.23■□□□□ 0.67
SNCAIP-211ENST00000509023 MRC1P22897 1456 aa19.22■□□□□ 0.67
SNCAIP-211ENST00000509023 EXOSC9Q06265 439 aaKnown RBP19.22■□□□□ 0.67
SNCAIP-211ENST00000509023 SLC52A2Q9HAB3 445 aa19.22■□□□□ 0.67
SNCAIP-211ENST00000509023 BABAM1Q9NWV8 329 aa19.21■□□□□ 0.67
SNCAIP-211ENST00000509023 TOGARAM1Q9Y4F4 1720 aa19.21■□□□□ 0.67
SNCAIP-211ENST00000509023 BTBD11A6QL63 1104 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms