RNA–Protein interactions for RNA: ENST00000508940.1

PROM1-209, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-209ENST00000508940 MEGF6O75095 1541 aa33.28■■■□□ 2.92
PROM1-209ENST00000508940 R3HDM1Q15032 1099 aaKnown RBP33.27■■■□□ 2.92
PROM1-209ENST00000508940 RREB1Q92766 1687 aa33.24■■■□□ 2.91
PROM1-209ENST00000508940 AMER1Q5JTC6 1135 aaPredicted RBP33.23■■■□□ 2.91
PROM1-209ENST00000508940 NHSQ6T4R5 1651 aa33.21■■■□□ 2.91
PROM1-209ENST00000508940 EYA1Q99502 592 aa33.21■■■□□ 2.91
PROM1-209ENST00000508940 RGPD3A6NKT7 1758 aaPredicted RBP33.2■■■□□ 2.91
PROM1-209ENST00000508940 RGPD4Q7Z3J3 1758 aa33.2■■■□□ 2.91
PROM1-209ENST00000508940 EIF4A2Q14240 407 aaKnown RBP33.2■■■□□ 2.91
PROM1-209ENST00000508940 NUP188Q5SRE5 1749 aa33.19■■■□□ 2.9
PROM1-209ENST00000508940 PER1O15534 1290 aaPredicted RBP33.18■■■□□ 2.9
PROM1-209ENST00000508940 SYTL4Q96C24 671 aaPredicted RBP33.18■■■□□ 2.9
PROM1-209ENST00000508940 PCDH11XQ9BZA7 1347 aa33.17■■■□□ 2.9
PROM1-209ENST00000508940 PCDH11YQ9BZA8 1340 aa33.17■■■□□ 2.9
PROM1-209ENST00000508940 TXNRD1Q16881 649 aa33.16■■■□□ 2.9
PROM1-209ENST00000508940 PRIM1P49642 420 aaKnown RBP33.15■■■□□ 2.9
PROM1-209ENST00000508940 CC2D1BQ5T0F9 858 aaKnown RBP33.15■■■□□ 2.9
PROM1-209ENST00000508940 PROM2Q8N271 834 aa33.15■■■□□ 2.9
PROM1-209ENST00000508940 NCAPD2Q15021 1401 aa33.13■■■□□ 2.89
PROM1-209ENST00000508940 SPG7Q9UQ90 795 aa33.13■■■□□ 2.89
PROM1-209ENST00000508940 SHANK3Q9BYB0 1731 aa33.13■■■□□ 2.89
PROM1-209ENST00000508940 BTAF1O14981 1849 aa33.1■■■□□ 2.89
PROM1-209ENST00000508940 CNGB1Q14028 1251 aaPredicted RBP33.09■■■□□ 2.89
PROM1-209ENST00000508940 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.07■■■□□ 2.88
PROM1-209ENST00000508940 IGSF1Q8N6C5 1336 aa33.06■■■□□ 2.88
PROM1-209ENST00000508940 CYP27B1O15528 508 aa33.06■■■□□ 2.88
PROM1-209ENST00000508940 STK32BQ9NY57 414 aa33.06■■■□□ 2.88
PROM1-209ENST00000508940 DOT1LQ8TEK3 1739 aa33.05■■■□□ 2.88
PROM1-209ENST00000508940 MTHFSP49914 203 aa33.05■■■□□ 2.88
PROM1-209ENST00000508940 NPC1L1Q9UHC9 1359 aa33.05■■■□□ 2.88
PROM1-209ENST00000508940 ANO8Q9HCE9 1232 aaPredicted RBP33.03■■■□□ 2.88
PROM1-209ENST00000508940 PKD1L3Q7Z443 1732 aa33.02■■■□□ 2.88
PROM1-209ENST00000508940 IL13P35225 146 aa32.99■■■□□ 2.87
PROM1-209ENST00000508940 SLC27A3Q5K4L6 730 aa32.99■■■□□ 2.87
PROM1-209ENST00000508940 IFNL2Q8IZJ0 200 aa32.99■■■□□ 2.87
PROM1-209ENST00000508940 LRP5O75197 1615 aa32.99■■■□□ 2.87
PROM1-209ENST00000508940 SLC15A2Q16348 729 aa32.98■■■□□ 2.87
PROM1-209ENST00000508940 NKX1-1Q15270 411 aaPredicted RBP32.97■■■□□ 2.87
PROM1-209ENST00000508940 PLEKHO1Q53GL0 409 aaPredicted RBP32.97■■■□□ 2.87
PROM1-209ENST00000508940 MPRIPQ6WCQ1 1025 aa32.97■■■□□ 2.87
PROM1-209ENST00000508940 PLEKHG2Q9H7P9 1386 aa32.96■■■□□ 2.87
PROM1-209ENST00000508940 SULT6B1Q6IMI4 303 aa32.96■■■□□ 2.87
PROM1-209ENST00000508940 PHKG2P15735 406 aa32.95■■■□□ 2.87
PROM1-209ENST00000508940 LRRC4BQ9NT99 713 aa32.95■■■□□ 2.87
PROM1-209ENST00000508940 AMOTQ4VCS5 1084 aa32.93■■■□□ 2.86
PROM1-209ENST00000508940 AEBP1Q8IUX7 1158 aa32.93■■■□□ 2.86
PROM1-209ENST00000508940 DIAPH1O60610 1272 aaKnown RBP32.92■■■□□ 2.86
PROM1-209ENST00000508940 SPON1Q9HCB6 807 aa32.91■■■□□ 2.86
PROM1-209ENST00000508940 CCNL1Q9UK58 526 aaPredicted RBP32.9■■■□□ 2.86
PROM1-209ENST00000508940 KCNQ4P56696 695 aa32.89■■■□□ 2.86
PROM1-209ENST00000508940 ZNF530Q6P9A1 599 aaPredicted RBP32.89■■■□□ 2.86
PROM1-209ENST00000508940 HSP90AB1P08238 724 aaKnown RBP32.88■■■□□ 2.85
PROM1-209ENST00000508940 SMARCC1Q92922 1105 aaPredicted RBP32.88■■■□□ 2.85
PROM1-209ENST00000508940 PIGBQ92521 554 aa32.87■■■□□ 2.85
PROM1-209ENST00000508940 TMOD3Q9NYL9 352 aa32.87■■■□□ 2.85
PROM1-209ENST00000508940 ITGB4P16144 1822 aa32.86■■■□□ 2.85
PROM1-209ENST00000508940 LY75O60449 1722 aa32.85■■■□□ 2.85
PROM1-209ENST00000508940 HMGB2P26583 209 aaKnown RBP32.85■■■□□ 2.85
PROM1-209ENST00000508940 C1orf141Q5JVX7 400 aa32.85■■■□□ 2.85
PROM1-209ENST00000508940 PDGFDQ9GZP0 370 aaPredicted RBP32.85■■■□□ 2.85
PROM1-209ENST00000508940 TOGARAM1Q9Y4F4 1720 aa32.85■■■□□ 2.85
PROM1-209ENST00000508940 KDRP35968 1356 aa32.84■■■□□ 2.85
PROM1-209ENST00000508940 ZNF827Q17R98 1081 aa32.84■■■□□ 2.85
PROM1-209ENST00000508940 SRCAPQ6ZRS2 3230 aa32.84■■■□□ 2.85
PROM1-209ENST00000508940 PAPPAQ13219 1627 aa32.84■■■□□ 2.85
PROM1-209ENST00000508940 PALLDQ8WX93 1383 aa32.83■■■□□ 2.85
PROM1-209ENST00000508940 HMOX1P09601 288 aa32.83■■■□□ 2.85
PROM1-209ENST00000508940 DCAF5Q96JK2 942 aa32.83■■■□□ 2.85
PROM1-209ENST00000508940 CFAP53Q96M91 514 aa32.83■■■□□ 2.85
PROM1-209ENST00000508940 ZBTB7AO95365 584 aa32.82■■■□□ 2.84
PROM1-209ENST00000508940 AKT1S1Q96B36 256 aa32.82■■■□□ 2.84
PROM1-209ENST00000508940 PPP1R1BQ9UD71 204 aaPredicted RBP32.82■■■□□ 2.84
PROM1-209ENST00000508940 TFCP2L1Q9NZI6 479 aa32.81■■■□□ 2.84
PROM1-209ENST00000508940 ERVV-2B6SEH9 535 aa32.8■■■□□ 2.84
PROM1-209ENST00000508940 CASZ1Q86V15 1759 aa32.8■■■□□ 2.84
PROM1-209ENST00000508940 U2SURPO15042 1029 aaKnown RBP32.79■■■□□ 2.84
PROM1-209ENST00000508940 ATF5Q9Y2D1 282 aaPredicted RBP32.77■■■□□ 2.84
PROM1-209ENST00000508940 PPP2R1AP30153 589 aa32.75■■■□□ 2.83
PROM1-209ENST00000508940 CABP4P57796 275 aa32.75■■■□□ 2.83
PROM1-209ENST00000508940 MTFR1LQ9H019 292 aa32.75■■■□□ 2.83
PROM1-209ENST00000508940 ASAP1Q9ULH1 1129 aa32.74■■■□□ 2.83
PROM1-209ENST00000508940 AKAP4Q5JQC9 854 aa32.72■■■□□ 2.83
PROM1-209ENST00000508940 NUDCQ9Y266 331 aa32.72■■■□□ 2.83
PROM1-209ENST00000508940 COL3A1P02461 1466 aaPredicted RBP32.72■■■□□ 2.83
PROM1-209ENST00000508940 LOC102724428A0A0B4J2F2 783 aa32.71■■■□□ 2.83
PROM1-209ENST00000508940 SIK1P57059 783 aa32.71■■■□□ 2.83
PROM1-209ENST00000508940 ATG3Q9NT62 314 aa32.7■■■□□ 2.83
PROM1-209ENST00000508940 PNPLA7Q6ZV29 1317 aa32.7■■■□□ 2.82
PROM1-209ENST00000508940 KDM6AO15550 1401 aaPredicted RBP32.69■■■□□ 2.82
PROM1-209ENST00000508940 SLC16A10Q8TF71 515 aa32.69■■■□□ 2.82
PROM1-209ENST00000508940 MSH5O43196 834 aa32.68■■■□□ 2.82
PROM1-209ENST00000508940 ZEB1P37275 1124 aaPredicted RBP32.68■■■□□ 2.82
PROM1-209ENST00000508940 C5P01031 1676 aa32.66■■■□□ 2.82
PROM1-209ENST00000508940 QSER1Q2KHR3 1735 aa32.66■■■□□ 2.82
PROM1-209ENST00000508940 ATP6V1AP38606 617 aa32.66■■■□□ 2.82
PROM1-209ENST00000508940 PTGER2P43116 358 aa32.66■■■□□ 2.82
PROM1-209ENST00000508940 MTHFSDQ2M296 383 aaKnown RBP32.66■■■□□ 2.82
PROM1-209ENST00000508940 AK7Q96M32 723 aa32.66■■■□□ 2.82
PROM1-209ENST00000508940 NFATC2IPQ8NCF5 419 aa32.65■■■□□ 2.82
PROM1-209ENST00000508940 DDX10Q13206 875 aaKnown RBP32.64■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms