RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 BTAF1O14981 1849 aa24.82■■□□□ 1.56
CLDND1-220ENST00000508902 SF3B2Q13435 895 aaKnown RBP24.82■■□□□ 1.56
CLDND1-220ENST00000508902 CAMKK2Q96RR4 588 aa24.82■■□□□ 1.56
CLDND1-220ENST00000508902 TOGARAM1Q9Y4F4 1720 aa24.82■■□□□ 1.56
CLDND1-220ENST00000508902 KCNQ2O43526 872 aa24.81■■□□□ 1.56
CLDND1-220ENST00000508902 EZH2Q15910 746 aaKnown RBP24.81■■□□□ 1.56
CLDND1-220ENST00000508902 IGSF1Q8N6C5 1336 aa24.81■■□□□ 1.56
CLDND1-220ENST00000508902 APBA3O96018 575 aa24.8■■□□□ 1.56
CLDND1-220ENST00000508902 BAG6P46379 1132 aa24.8■■□□□ 1.56
CLDND1-220ENST00000508902 CNGB1Q14028 1251 aaPredicted RBP24.8■■□□□ 1.56
CLDND1-220ENST00000508902 KAT6BQ8WYB5 2073 aa24.78■■□□□ 1.56
CLDND1-220ENST00000508902 ZCRB1Q8TBF4 217 aaKnown RBP24.78■■□□□ 1.56
CLDND1-220ENST00000508902 ACSBG1Q96GR2 724 aa24.78■■□□□ 1.56
CLDND1-220ENST00000508902 MTHFSP49914 203 aa24.77■■□□□ 1.56
CLDND1-220ENST00000508902 DDX54Q8TDD1 881 aaKnown RBP24.77■■□□□ 1.56
CLDND1-220ENST00000508902 SRCAPQ6ZRS2 3230 aa24.76■■□□□ 1.55
CLDND1-220ENST00000508902 IL13P35225 146 aa24.76■■□□□ 1.55
CLDND1-220ENST00000508902 BCL11BQ9C0K0 894 aaPredicted RBP24.76■■□□□ 1.55
CLDND1-220ENST00000508902 TATP17735 454 aaPredicted RBP24.75■■□□□ 1.55
CLDND1-220ENST00000508902 AEBP1Q8IUX7 1158 aa24.75■■□□□ 1.55
CLDND1-220ENST00000508902 RAPGEF4Q8WZA2 1011 aa24.75■■□□□ 1.55
CLDND1-220ENST00000508902 CYP27B1O15528 508 aa24.74■■□□□ 1.55
CLDND1-220ENST00000508902 PROM2Q8N271 834 aa24.72■■□□□ 1.55
CLDND1-220ENST00000508902 ITGB4P16144 1822 aa24.72■■□□□ 1.55
CLDND1-220ENST00000508902 KDRP35968 1356 aa24.71■■□□□ 1.55
CLDND1-220ENST00000508902 PARD3Q8TEW0 1356 aa24.71■■□□□ 1.55
CLDND1-220ENST00000508902 PLSCR1O15162 318 aa24.68■■□□□ 1.54
CLDND1-220ENST00000508902 PAPPAQ13219 1627 aa24.68■■□□□ 1.54
CLDND1-220ENST00000508902 PCDH11XQ9BZA7 1347 aa24.67■■□□□ 1.54
CLDND1-220ENST00000508902 PCDH11YQ9BZA8 1340 aa24.67■■□□□ 1.54
CLDND1-220ENST00000508902 LY75O60449 1722 aa24.66■■□□□ 1.54
CLDND1-220ENST00000508902 ZEB1P37275 1124 aaPredicted RBP24.66■■□□□ 1.54
CLDND1-220ENST00000508902 PPP2R1AP30153 589 aa24.65■■□□□ 1.54
CLDND1-220ENST00000508902 PRIM1P49642 420 aaKnown RBP24.65■■□□□ 1.54
CLDND1-220ENST00000508902 ANO8Q9HCE9 1232 aaPredicted RBP24.64■■□□□ 1.54
CLDND1-220ENST00000508902 PLEKHG2Q9H7P9 1386 aa24.64■■□□□ 1.53
CLDND1-220ENST00000508902 PSDA5PKW4 1024 aaPredicted RBP24.63■■□□□ 1.53
CLDND1-220ENST00000508902 DDX10Q13206 875 aaKnown RBP24.63■■□□□ 1.53
CLDND1-220ENST00000508902 SULT6B1Q6IMI4 303 aa24.63■■□□□ 1.53
CLDND1-220ENST00000508902 NKX1-1Q15270 411 aaPredicted RBP24.62■■□□□ 1.53
CLDND1-220ENST00000508902 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.62■■□□□ 1.53
CLDND1-220ENST00000508902 PHKG2P15735 406 aa24.61■■□□□ 1.53
CLDND1-220ENST00000508902 TXNRD1Q16881 649 aa24.6■■□□□ 1.53
CLDND1-220ENST00000508902 KDM6AO15550 1401 aaPredicted RBP24.6■■□□□ 1.53
CLDND1-220ENST00000508902 DIAPH1O60610 1272 aaKnown RBP24.59■■□□□ 1.53
CLDND1-220ENST00000508902 HMOX1P09601 288 aa24.59■■□□□ 1.53
CLDND1-220ENST00000508902 SPG7Q9UQ90 795 aa24.59■■□□□ 1.53
CLDND1-220ENST00000508902 VIRMAQ69YN4 1812 aaKnown RBP24.58■■□□□ 1.53
CLDND1-220ENST00000508902 R3HDM1Q15032 1099 aaKnown RBP24.58■■□□□ 1.53
CLDND1-220ENST00000508902 SYTL4Q96C24 671 aaPredicted RBP24.58■■□□□ 1.53
CLDND1-220ENST00000508902 CASZ1Q86V15 1759 aa24.57■■□□□ 1.52
CLDND1-220ENST00000508902 LRRC4BQ9NT99 713 aa24.57■■□□□ 1.52
CLDND1-220ENST00000508902 TUBGCP6Q96RT7 1819 aa24.56■■□□□ 1.52
CLDND1-220ENST00000508902 SCN11AQ9UI33 1791 aa24.55■■□□□ 1.52
CLDND1-220ENST00000508902 ADAMTS7Q9UKP4 1686 aa24.54■■□□□ 1.52
CLDND1-220ENST00000508902 IFNL2Q8IZJ0 200 aa24.54■■□□□ 1.52
CLDND1-220ENST00000508902 KCNQ4P56696 695 aa24.53■■□□□ 1.52
CLDND1-220ENST00000508902 ZNF530Q6P9A1 599 aaPredicted RBP24.53■■□□□ 1.52
CLDND1-220ENST00000508902 TAF1LQ8IZX4 1826 aa24.53■■□□□ 1.52
CLDND1-220ENST00000508902 PIGBQ92521 554 aa24.52■■□□□ 1.52
CLDND1-220ENST00000508902 LRP5O75197 1615 aa24.51■■□□□ 1.51
CLDND1-220ENST00000508902 PLEKHO1Q53GL0 409 aaPredicted RBP24.51■■□□□ 1.51
CLDND1-220ENST00000508902 MPRIPQ6WCQ1 1025 aa24.5■■□□□ 1.51
CLDND1-220ENST00000508902 PDGFDQ9GZP0 370 aaPredicted RBP24.5■■□□□ 1.51
CLDND1-220ENST00000508902 U2SURPO15042 1029 aaKnown RBP24.49■■□□□ 1.51
CLDND1-220ENST00000508902 ZNF827Q17R98 1081 aa24.49■■□□□ 1.51
CLDND1-220ENST00000508902 AMOTQ4VCS5 1084 aa24.49■■□□□ 1.51
CLDND1-220ENST00000508902 C5P01031 1676 aa24.49■■□□□ 1.51
CLDND1-220ENST00000508902 PALLDQ8WX93 1383 aa24.47■■□□□ 1.51
CLDND1-220ENST00000508902 MTHFSDQ2M296 383 aaKnown RBP24.47■■□□□ 1.51
CLDND1-220ENST00000508902 RSPH6AQ9H0K4 717 aa24.47■■□□□ 1.51
CLDND1-220ENST00000508902 QSER1Q2KHR3 1735 aa24.47■■□□□ 1.51
CLDND1-220ENST00000508902 MRC1P22897 1456 aa24.46■■□□□ 1.51
CLDND1-220ENST00000508902 NBPF14Q5TI25 921 aa24.44■■□□□ 1.5
CLDND1-220ENST00000508902 DCAF5Q96JK2 942 aa24.44■■□□□ 1.5
CLDND1-220ENST00000508902 CFAP53Q96M91 514 aa24.44■■□□□ 1.5
CLDND1-220ENST00000508902 ASAP1Q9ULH1 1129 aa24.44■■□□□ 1.5
CLDND1-220ENST00000508902 AKT1S1Q96B36 256 aa24.43■■□□□ 1.5
CLDND1-220ENST00000508902 PHACTR3Q96KR7 559 aa24.43■■□□□ 1.5
CLDND1-220ENST00000508902 SLC15A2Q16348 729 aa24.42■■□□□ 1.5
CLDND1-220ENST00000508902 SLC27A3Q5K4L6 730 aa24.42■■□□□ 1.5
CLDND1-220ENST00000508902 SIPA1L3O60292 1781 aaPredicted RBP24.42■■□□□ 1.5
CLDND1-220ENST00000508902 PRKAR2BP31323 418 aa24.41■■□□□ 1.5
CLDND1-220ENST00000508902 RALBP1Q15311 655 aa24.41■■□□□ 1.5
CLDND1-220ENST00000508902 LGR6Q9HBX8 967 aa24.41■■□□□ 1.5
CLDND1-220ENST00000508902 ATG3Q9NT62 314 aa24.41■■□□□ 1.5
CLDND1-220ENST00000508902 TMOD3Q9NYL9 352 aa24.41■■□□□ 1.5
CLDND1-220ENST00000508902 ERVV-2B6SEH9 535 aa24.4■■□□□ 1.5
CLDND1-220ENST00000508902 AKAP4Q5JQC9 854 aa24.4■■□□□ 1.5
CLDND1-220ENST00000508902 CCNL1Q9UK58 526 aaPredicted RBP24.4■■□□□ 1.5
CLDND1-220ENST00000508902 C4BP0C0L5 1744 aa24.4■■□□□ 1.5
CLDND1-220ENST00000508902 ZNF316A6NFI3 1004 aaPredicted RBP24.39■■□□□ 1.49
CLDND1-220ENST00000508902 HSP90AB1P08238 724 aaKnown RBP24.39■■□□□ 1.49
CLDND1-220ENST00000508902 C1orf141Q5JVX7 400 aa24.39■■□□□ 1.49
CLDND1-220ENST00000508902 SLC4A9Q96Q91 983 aa24.39■■□□□ 1.49
CLDND1-220ENST00000508902 ZNF831Q5JPB2 1677 aa24.39■■□□□ 1.49
CLDND1-220ENST00000508902 COL5A3P25940 1745 aaPredicted RBP24.38■■□□□ 1.49
CLDND1-220ENST00000508902 U2AF1L5P0DN76 240 aaPredicted RBP24.38■■□□□ 1.49
CLDND1-220ENST00000508902 U2AF1Q01081 240 aaKnown RBP eCLIP24.38■■□□□ 1.49
CLDND1-220ENST00000508902 STK32BQ9NY57 414 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms