RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 BCL11BQ9C0K0 894 aaPredicted RBP14.34□□□□□ -0.11
POLR2J3-213ENST00000508848 PLSCR1O15162 318 aa14.33□□□□□ -0.12
POLR2J3-213ENST00000508848 KDRP35968 1356 aa14.33□□□□□ -0.12
POLR2J3-213ENST00000508848 PKD1L3Q7Z443 1732 aa14.32□□□□□ -0.12
POLR2J3-213ENST00000508848 TNS1Q9HBL0 1735 aaKnown RBP14.32□□□□□ -0.12
POLR2J3-213ENST00000508848 RGPD3A6NKT7 1758 aaPredicted RBP14.32□□□□□ -0.12
POLR2J3-213ENST00000508848 RGPD4Q7Z3J3 1758 aa14.32□□□□□ -0.12
POLR2J3-213ENST00000508848 BAG6P46379 1132 aa14.32□□□□□ -0.12
POLR2J3-213ENST00000508848 NKX1-1Q15270 411 aaPredicted RBP14.31□□□□□ -0.12
POLR2J3-213ENST00000508848 RALBP1Q15311 655 aa14.31□□□□□ -0.12
POLR2J3-213ENST00000508848 SPG7Q9UQ90 795 aa14.31□□□□□ -0.12
POLR2J3-213ENST00000508848 SHANK3Q9BYB0 1731 aa14.31□□□□□ -0.12
POLR2J3-213ENST00000508848 MEGF6O75095 1541 aa14.31□□□□□ -0.12
POLR2J3-213ENST00000508848 DIAPH1O60610 1272 aaKnown RBP14.3□□□□□ -0.12
POLR2J3-213ENST00000508848 TRIM37O94972 964 aa14.3□□□□□ -0.12
POLR2J3-213ENST00000508848 AMOTQ4VCS5 1084 aa14.3□□□□□ -0.12
POLR2J3-213ENST00000508848 FAM182BQ5T319 152 aa14.3□□□□□ -0.12
POLR2J3-213ENST00000508848 PPP2R1AP30153 589 aa14.29□□□□□ -0.12
POLR2J3-213ENST00000508848 DDX10Q13206 875 aaKnown RBP14.29□□□□□ -0.12
POLR2J3-213ENST00000508848 CFAP53Q96M91 514 aa14.29□□□□□ -0.12
POLR2J3-213ENST00000508848 PCDH11XQ9BZA7 1347 aa14.29□□□□□ -0.12
POLR2J3-213ENST00000508848 PCDH11YQ9BZA8 1340 aa14.29□□□□□ -0.12
POLR2J3-213ENST00000508848 ZNF316A6NFI3 1004 aaPredicted RBP14.28□□□□□ -0.12
POLR2J3-213ENST00000508848 HMGB2P26583 209 aaKnown RBP14.28□□□□□ -0.12
POLR2J3-213ENST00000508848 NHSQ6T4R5 1651 aa14.28□□□□□ -0.12
POLR2J3-213ENST00000508848 CAMKK2Q96RR4 588 aa14.28□□□□□ -0.12
POLR2J3-213ENST00000508848 COL3A1P02461 1466 aaPredicted RBP14.27□□□□□ -0.12
POLR2J3-213ENST00000508848 APBA3O96018 575 aa14.27□□□□□ -0.13
POLR2J3-213ENST00000508848 USHBP1Q8N6Y0 703 aa14.27□□□□□ -0.13
POLR2J3-213ENST00000508848 DDX54Q8TDD1 881 aaKnown RBP14.27□□□□□ -0.13
POLR2J3-213ENST00000508848 CYP27B1O15528 508 aa14.26□□□□□ -0.13
POLR2J3-213ENST00000508848 PLEKHO1Q53GL0 409 aaPredicted RBP14.26□□□□□ -0.13
POLR2J3-213ENST00000508848 NUDCQ9Y266 331 aa14.26□□□□□ -0.13
POLR2J3-213ENST00000508848 HSP90AB1P08238 724 aaKnown RBP14.25□□□□□ -0.13
POLR2J3-213ENST00000508848 SULT6B1Q6IMI4 303 aa14.25□□□□□ -0.13
POLR2J3-213ENST00000508848 IFNL2Q8IZJ0 200 aa14.25□□□□□ -0.13
POLR2J3-213ENST00000508848 DEFB132Q7Z7B7 95 aa14.24□□□□□ -0.13
POLR2J3-213ENST00000508848 RREB1Q92766 1687 aa14.23□□□□□ -0.13
POLR2J3-213ENST00000508848 BTAF1O14981 1849 aa14.22□□□□□ -0.13
POLR2J3-213ENST00000508848 ERVV-2B6SEH9 535 aa14.22□□□□□ -0.13
POLR2J3-213ENST00000508848 KCNQ2O43526 872 aa14.22□□□□□ -0.13
POLR2J3-213ENST00000508848 FCHSD2O94868 740 aa14.22□□□□□ -0.13
POLR2J3-213ENST00000508848 PHKG2P15735 406 aa14.22□□□□□ -0.13
POLR2J3-213ENST00000508848 EN1Q05925 392 aaPredicted RBP14.22□□□□□ -0.13
POLR2J3-213ENST00000508848 ITGB4P16144 1822 aa14.22□□□□□ -0.13
POLR2J3-213ENST00000508848 PRIM1P49642 420 aaKnown RBP14.21□□□□□ -0.13
POLR2J3-213ENST00000508848 DCAF5Q96JK2 942 aa14.21□□□□□ -0.13
POLR2J3-213ENST00000508848 MAPK8IP2Q13387 824 aaPredicted RBP14.2□□□□□ -0.14
POLR2J3-213ENST00000508848 SLC27A3Q5K4L6 730 aa14.2□□□□□ -0.14
POLR2J3-213ENST00000508848 AEBP1Q8IUX7 1158 aa14.2□□□□□ -0.14
POLR2J3-213ENST00000508848 PRKRIP1Q9H875 184 aaPredicted RBP14.2□□□□□ -0.14
POLR2J3-213ENST00000508848 MYBBP1AQ9BQG0 1328 aaKnown RBP14.19□□□□□ -0.14
POLR2J3-213ENST00000508848 LY75O60449 1722 aa14.19□□□□□ -0.14
POLR2J3-213ENST00000508848 DOT1LQ8TEK3 1739 aa14.19□□□□□ -0.14
POLR2J3-213ENST00000508848 EZH2Q15910 746 aaKnown RBP14.19□□□□□ -0.14
POLR2J3-213ENST00000508848 AKAP4Q5JQC9 854 aa14.19□□□□□ -0.14
POLR2J3-213ENST00000508848 PTF1AQ7RTS3 328 aa14.19□□□□□ -0.14
POLR2J3-213ENST00000508848 PROM2Q8N271 834 aa14.19□□□□□ -0.14
POLR2J3-213ENST00000508848 PNNQ9H307 717 aaKnown RBP14.18□□□□□ -0.14
POLR2J3-213ENST00000508848 SCN11AQ9UI33 1791 aa14.17□□□□□ -0.14
POLR2J3-213ENST00000508848 TXNRD1Q16881 649 aa14.17□□□□□ -0.14
POLR2J3-213ENST00000508848 C1orf141Q5JVX7 400 aa14.17□□□□□ -0.14
POLR2J3-213ENST00000508848 NBPF14Q5TI25 921 aa14.17□□□□□ -0.14
POLR2J3-213ENST00000508848 SMARCC1Q92922 1105 aaPredicted RBP14.17□□□□□ -0.14
POLR2J3-213ENST00000508848 ACSBG1Q96GR2 724 aa14.17□□□□□ -0.14
POLR2J3-213ENST00000508848 RSPH6AQ9H0K4 717 aa14.17□□□□□ -0.14
POLR2J3-213ENST00000508848 ADAMTS7Q9UKP4 1686 aa14.17□□□□□ -0.14
POLR2J3-213ENST00000508848 NUP188Q5SRE5 1749 aa14.16□□□□□ -0.14
POLR2J3-213ENST00000508848 ZNF530Q6P9A1 599 aaPredicted RBP14.16□□□□□ -0.14
POLR2J3-213ENST00000508848 GAS2L2Q8NHY3 880 aa14.16□□□□□ -0.14
POLR2J3-213ENST00000508848 ZNF831Q5JPB2 1677 aa14.16□□□□□ -0.14
POLR2J3-213ENST00000508848 U2SURPO15042 1029 aaKnown RBP14.15□□□□□ -0.14
POLR2J3-213ENST00000508848 HMOX1P09601 288 aa14.15□□□□□ -0.14
POLR2J3-213ENST00000508848 VIRMAQ69YN4 1812 aaKnown RBP14.15□□□□□ -0.14
POLR2J3-213ENST00000508848 TOGARAM1Q9Y4F4 1720 aa14.15□□□□□ -0.14
POLR2J3-213ENST00000508848 HTATSF1O43719 755 aaKnown RBP14.14□□□□□ -0.15
POLR2J3-213ENST00000508848 U2AF1L5P0DN76 240 aaPredicted RBP14.14□□□□□ -0.15
POLR2J3-213ENST00000508848 U2AF1Q01081 240 aaKnown RBP eCLIP14.14□□□□□ -0.15
POLR2J3-213ENST00000508848 CNGB1Q14028 1251 aaPredicted RBP14.14□□□□□ -0.15
POLR2J3-213ENST00000508848 MTHFSDQ2M296 383 aaKnown RBP14.14□□□□□ -0.15
POLR2J3-213ENST00000508848 PIGBQ92521 554 aa14.14□□□□□ -0.15
POLR2J3-213ENST00000508848 SYTL4Q96C24 671 aaPredicted RBP14.13□□□□□ -0.15
POLR2J3-213ENST00000508848 TMOD3Q9NYL9 352 aa14.13□□□□□ -0.15
POLR2J3-213ENST00000508848 MPRIPQ6WCQ1 1025 aa14.12□□□□□ -0.15
POLR2J3-213ENST00000508848 GNAT3A8MTJ3 354 aa14.11□□□□□ -0.15
POLR2J3-213ENST00000508848 KDM6AO15550 1401 aaPredicted RBP14.11□□□□□ -0.15
POLR2J3-213ENST00000508848 PRKAR2BP31323 418 aa14.11□□□□□ -0.15
POLR2J3-213ENST00000508848 PLEKHF1Q96S99 279 aa14.11□□□□□ -0.15
POLR2J3-213ENST00000508848 QSER1Q2KHR3 1735 aa14.1□□□□□ -0.15
POLR2J3-213ENST00000508848 RNMTO43148 476 aaKnown RBP14.1□□□□□ -0.15
POLR2J3-213ENST00000508848 NEFMP07197 916 aa14.1□□□□□ -0.15
POLR2J3-213ENST00000508848 CABP4P57796 275 aa14.1□□□□□ -0.15
POLR2J3-213ENST00000508848 PHACTR3Q96KR7 559 aa14.1□□□□□ -0.15
POLR2J3-213ENST00000508848 LRRC4BQ9NT99 713 aa14.1□□□□□ -0.15
POLR2J3-213ENST00000508848 TAF1LQ8IZX4 1826 aa14.1□□□□□ -0.15
POLR2J3-213ENST00000508848 SRCAPQ6ZRS2 3230 aa14.09□□□□□ -0.15
POLR2J3-213ENST00000508848 PAPPAQ13219 1627 aa14.09□□□□□ -0.15
POLR2J3-213ENST00000508848 SLC52A2Q9HAB3 445 aa14.09□□□□□ -0.15
POLR2J3-213ENST00000508848 MRC1P22897 1456 aa14.09□□□□□ -0.15
POLR2J3-213ENST00000508848 CEMIPQ8WUJ3 1361 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 400.3 ms