RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 DDX54Q8TDD1 881 aaKnown RBP27.07■■□□□ 1.92
SFXN1-209ENST00000508290 RGPD2P0DJD1 1756 aa27.07■■□□□ 1.92
SFXN1-209ENST00000508290 RREB1Q92766 1687 aa27.06■■□□□ 1.92
SFXN1-209ENST00000508290 USHBP1Q8N6Y0 703 aa27.06■■□□□ 1.92
SFXN1-209ENST00000508290 NBPF14Q5TI25 921 aa27.05■■□□□ 1.92
SFXN1-209ENST00000508290 PCDH11XQ9BZA7 1347 aa27.05■■□□□ 1.92
SFXN1-209ENST00000508290 PCDH11YQ9BZA8 1340 aa27.05■■□□□ 1.92
SFXN1-209ENST00000508290 EIF4A2Q14240 407 aaKnown RBP27.03■■□□□ 1.92
SFXN1-209ENST00000508290 EYA1Q99502 592 aa27.03■■□□□ 1.92
SFXN1-209ENST00000508290 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.03■■□□□ 1.92
SFXN1-209ENST00000508290 SPG7Q9UQ90 795 aa27■■□□□ 1.91
SFXN1-209ENST00000508290 IGSF1Q8N6C5 1336 aa26.99■■□□□ 1.91
SFXN1-209ENST00000508290 KCNQ2O43526 872 aa26.99■■□□□ 1.91
SFXN1-209ENST00000508290 ACSBG1Q96GR2 724 aa26.99■■□□□ 1.91
SFXN1-209ENST00000508290 PTF1AQ7RTS3 328 aa26.98■■□□□ 1.91
SFXN1-209ENST00000508290 NUP188Q5SRE5 1749 aa26.98■■□□□ 1.91
SFXN1-209ENST00000508290 SHANK3Q9BYB0 1731 aa26.97■■□□□ 1.91
SFXN1-209ENST00000508290 CC2D1BQ5T0F9 858 aaKnown RBP26.96■■□□□ 1.91
SFXN1-209ENST00000508290 PKD1L3Q7Z443 1732 aa26.96■■□□□ 1.91
SFXN1-209ENST00000508290 R3HDM1Q15032 1099 aaKnown RBP26.94■■□□□ 1.9
SFXN1-209ENST00000508290 TXNRD1Q16881 649 aa26.94■■□□□ 1.9
SFXN1-209ENST00000508290 PSDA5PKW4 1024 aaPredicted RBP26.92■■□□□ 1.9
SFXN1-209ENST00000508290 PRIM1P49642 420 aaKnown RBP26.92■■□□□ 1.9
SFXN1-209ENST00000508290 MTHFSP49914 203 aa26.92■■□□□ 1.9
SFXN1-209ENST00000508290 HMGB2P26583 209 aaKnown RBP26.91■■□□□ 1.9
SFXN1-209ENST00000508290 SYTL4Q96C24 671 aaPredicted RBP26.91■■□□□ 1.9
SFXN1-209ENST00000508290 CYP27B1O15528 508 aa26.9■■□□□ 1.9
SFXN1-209ENST00000508290 NKX1-1Q15270 411 aaPredicted RBP26.9■■□□□ 1.9
SFXN1-209ENST00000508290 SLC27A3Q5K4L6 730 aa26.9■■□□□ 1.9
SFXN1-209ENST00000508290 PROM2Q8N271 834 aa26.9■■□□□ 1.9
SFXN1-209ENST00000508290 BTAF1O14981 1849 aa26.9■■□□□ 1.9
SFXN1-209ENST00000508290 DOT1LQ8TEK3 1739 aa26.9■■□□□ 1.9
SFXN1-209ENST00000508290 IL13P35225 146 aa26.89■■□□□ 1.9
SFXN1-209ENST00000508290 AMOTQ4VCS5 1084 aa26.89■■□□□ 1.9
SFXN1-209ENST00000508290 KDRP35968 1356 aa26.88■■□□□ 1.89
SFXN1-209ENST00000508290 IFNL2Q8IZJ0 200 aa26.88■■□□□ 1.89
SFXN1-209ENST00000508290 ZEB1P37275 1124 aaPredicted RBP26.87■■□□□ 1.89
SFXN1-209ENST00000508290 LRP5O75197 1615 aa26.87■■□□□ 1.89
SFXN1-209ENST00000508290 PLEKHO1Q53GL0 409 aaPredicted RBP26.86■■□□□ 1.89
SFXN1-209ENST00000508290 HSP90AB1P08238 724 aaKnown RBP26.85■■□□□ 1.89
SFXN1-209ENST00000508290 STK32BQ9NY57 414 aa26.85■■□□□ 1.89
SFXN1-209ENST00000508290 DIAPH1O60610 1272 aaKnown RBP26.84■■□□□ 1.89
SFXN1-209ENST00000508290 PHKG2P15735 406 aa26.84■■□□□ 1.89
SFXN1-209ENST00000508290 SULT6B1Q6IMI4 303 aa26.83■■□□□ 1.89
SFXN1-209ENST00000508290 CFAP53Q96M91 514 aa26.81■■□□□ 1.88
SFXN1-209ENST00000508290 SLC15A2Q16348 729 aa26.8■■□□□ 1.88
SFXN1-209ENST00000508290 SMARCC1Q92922 1105 aaPredicted RBP26.8■■□□□ 1.88
SFXN1-209ENST00000508290 ANO8Q9HCE9 1232 aaPredicted RBP26.8■■□□□ 1.88
SFXN1-209ENST00000508290 AEBP1Q8IUX7 1158 aa26.78■■□□□ 1.88
SFXN1-209ENST00000508290 PAPPAQ13219 1627 aa26.78■■□□□ 1.88
SFXN1-209ENST00000508290 KAT6BQ8WYB5 2073 aa26.77■■□□□ 1.88
SFXN1-209ENST00000508290 MPRIPQ6WCQ1 1025 aa26.77■■□□□ 1.88
SFXN1-209ENST00000508290 DCAF5Q96JK2 942 aa26.77■■□□□ 1.88
SFXN1-209ENST00000508290 C1orf141Q5JVX7 400 aa26.76■■□□□ 1.87
SFXN1-209ENST00000508290 ZNF530Q6P9A1 599 aaPredicted RBP26.76■■□□□ 1.87
SFXN1-209ENST00000508290 LY75O60449 1722 aa26.76■■□□□ 1.87
SFXN1-209ENST00000508290 COL3A1P02461 1466 aaPredicted RBP26.75■■□□□ 1.87
SFXN1-209ENST00000508290 SRCAPQ6ZRS2 3230 aa26.75■■□□□ 1.87
SFXN1-209ENST00000508290 ERVV-2B6SEH9 535 aa26.75■■□□□ 1.87
SFXN1-209ENST00000508290 CNGB1Q14028 1251 aaPredicted RBP26.75■■□□□ 1.87
SFXN1-209ENST00000508290 LRRC4BQ9NT99 713 aa26.75■■□□□ 1.87
SFXN1-209ENST00000508290 TMOD3Q9NYL9 352 aa26.75■■□□□ 1.87
SFXN1-209ENST00000508290 PALLDQ8WX93 1383 aa26.74■■□□□ 1.87
SFXN1-209ENST00000508290 TOGARAM1Q9Y4F4 1720 aa26.74■■□□□ 1.87
SFXN1-209ENST00000508290 CCNL1Q9UK58 526 aaPredicted RBP26.74■■□□□ 1.87
SFXN1-209ENST00000508290 SPON1Q9HCB6 807 aa26.73■■□□□ 1.87
SFXN1-209ENST00000508290 PPP2R1AP30153 589 aa26.72■■□□□ 1.87
SFXN1-209ENST00000508290 PIGBQ92521 554 aa26.72■■□□□ 1.87
SFXN1-209ENST00000508290 NUDCQ9Y266 331 aa26.71■■□□□ 1.87
SFXN1-209ENST00000508290 AKT1S1Q96B36 256 aa26.7■■□□□ 1.86
SFXN1-209ENST00000508290 ITGB4P16144 1822 aa26.68■■□□□ 1.86
SFXN1-209ENST00000508290 U2SURPO15042 1029 aaKnown RBP26.68■■□□□ 1.86
SFXN1-209ENST00000508290 HMOX1P09601 288 aa26.68■■□□□ 1.86
SFXN1-209ENST00000508290 AKAP4Q5JQC9 854 aa26.68■■□□□ 1.86
SFXN1-209ENST00000508290 CASZ1Q86V15 1759 aa26.68■■□□□ 1.86
SFXN1-209ENST00000508290 KDM6AO15550 1401 aaPredicted RBP26.65■■□□□ 1.86
SFXN1-209ENST00000508290 ZNF827Q17R98 1081 aa26.65■■□□□ 1.86
SFXN1-209ENST00000508290 CABP4P57796 275 aa26.64■■□□□ 1.86
SFXN1-209ENST00000508290 SLC16A10Q8TF71 515 aa26.64■■□□□ 1.86
SFXN1-209ENST00000508290 MTFR1LQ9H019 292 aa26.64■■□□□ 1.86
SFXN1-209ENST00000508290 TFCP2L1Q9NZI6 479 aa26.64■■□□□ 1.86
SFXN1-209ENST00000508290 QSER1Q2KHR3 1735 aa26.63■■□□□ 1.85
SFXN1-209ENST00000508290 RALBP1Q15311 655 aa26.62■■□□□ 1.85
SFXN1-209ENST00000508290 LOC102724428A0A0B4J2F2 783 aa26.61■■□□□ 1.85
SFXN1-209ENST00000508290 SIK1P57059 783 aa26.61■■□□□ 1.85
SFXN1-209ENST00000508290 GAS2L2Q8NHY3 880 aa26.61■■□□□ 1.85
SFXN1-209ENST00000508290 FLAD1Q8NFF5 587 aa26.6■■□□□ 1.85
SFXN1-209ENST00000508290 ATG3Q9NT62 314 aa26.6■■□□□ 1.85
SFXN1-209ENST00000508290 C5P01031 1676 aa26.6■■□□□ 1.85
SFXN1-209ENST00000508290 KCNQ4P56696 695 aa26.59■■□□□ 1.85
SFXN1-209ENST00000508290 DDX10Q13206 875 aaKnown RBP26.59■■□□□ 1.85
SFXN1-209ENST00000508290 MTHFSDQ2M296 383 aaKnown RBP26.59■■□□□ 1.85
SFXN1-209ENST00000508290 PPP1R1BQ9UD71 204 aaPredicted RBP26.59■■□□□ 1.85
SFXN1-209ENST00000508290 ASAP1Q9ULH1 1129 aa26.59■■□□□ 1.85
SFXN1-209ENST00000508290 FCHSD2O94868 740 aa26.57■■□□□ 1.84
SFXN1-209ENST00000508290 ZBTB7AO95365 584 aa26.57■■□□□ 1.84
SFXN1-209ENST00000508290 PDGFDQ9GZP0 370 aaPredicted RBP26.57■■□□□ 1.84
SFXN1-209ENST00000508290 PNPLA7Q6ZV29 1317 aa26.57■■□□□ 1.84
SFXN1-209ENST00000508290 U2AF1L5P0DN76 240 aaPredicted RBP26.56■■□□□ 1.84
SFXN1-209ENST00000508290 U2AF1Q01081 240 aaKnown RBP eCLIP26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms