RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 PLEKHM2Q8IWE5 1019 aa13.63□□□□□ -0.23
LIN54-207ENST00000508171 NGDNQ8NEJ9 315 aaKnown RBP13.63□□□□□ -0.23
LIN54-207ENST00000508171 GSPT1P15170 499 aaKnown RBP13.63□□□□□ -0.23
LIN54-207ENST00000508171 CRB1P82279 1406 aa13.63□□□□□ -0.23
LIN54-207ENST00000508171 MCM4P33991 863 aa13.62□□□□□ -0.23
LIN54-207ENST00000508171 CD2BP2O95400 341 aaKnown RBP13.62□□□□□ -0.23
LIN54-207ENST00000508171 MEIS3Q99687 375 aa13.62□□□□□ -0.23
LIN54-207ENST00000508171 RBM42Q9BTD8 480 aaKnown RBP13.62□□□□□ -0.23
LIN54-207ENST00000508171 KIF24Q5T7B8 1368 aa13.62□□□□□ -0.23
LIN54-207ENST00000508171 KIAA0232Q92628 1395 aa13.62□□□□□ -0.23
LIN54-207ENST00000508171 NUTM2GQ5VZR2 741 aa13.61□□□□□ -0.23
LIN54-207ENST00000508171 G2E3Q7L622 706 aa13.61□□□□□ -0.23
LIN54-207ENST00000508171 ANKRD44Q8N8A2 993 aa13.61□□□□□ -0.23
LIN54-207ENST00000508171 OTUD7AQ8TE49 926 aaPredicted RBP13.61□□□□□ -0.23
LIN54-207ENST00000508171 SNX21Q969T3 373 aa13.61□□□□□ -0.23
LIN54-207ENST00000508171 EYA1Q99502 592 aa13.61□□□□□ -0.23
LIN54-207ENST00000508171 MSH6P52701 1360 aa13.61□□□□□ -0.23
LIN54-207ENST00000508171 APBB1O00213 710 aa13.61□□□□□ -0.23
LIN54-207ENST00000508171 AMPHP49418 695 aa13.61□□□□□ -0.23
LIN54-207ENST00000508171 ATP10DQ9P241 1426 aa13.6□□□□□ -0.23
LIN54-207ENST00000508171 HAP1P54257 671 aaPredicted RBP13.6□□□□□ -0.23
LIN54-207ENST00000508171 CEP85Q6P2H3 762 aa13.6□□□□□ -0.23
LIN54-207ENST00000508171 TBX22Q9Y458 520 aa13.6□□□□□ -0.23
LIN54-207ENST00000508171 TTC21AQ8NDW8 1320 aa13.6□□□□□ -0.23
LIN54-207ENST00000508171 FMN2Q9NZ56 1722 aa13.6□□□□□ -0.23
LIN54-207ENST00000508171 F6X3S4 739 aa13.6□□□□□ -0.23
LIN54-207ENST00000508171 TSPYL4Q9UJ04 414 aa13.6□□□□□ -0.23
LIN54-207ENST00000508171 SMARCA5O60264 1052 aaPredicted RBP13.59□□□□□ -0.23
LIN54-207ENST00000508171 RTF1Q92541 710 aaKnown RBP13.59□□□□□ -0.23
LIN54-207ENST00000508171 PTPRCP08575 1304 aa13.59□□□□□ -0.23
LIN54-207ENST00000508171 DDIT3P35638 169 aa13.59□□□□□ -0.23
LIN54-207ENST00000508171 SLC4A10Q6U841 1118 aa13.59□□□□□ -0.23
LIN54-207ENST00000508171 RPAP2Q8IXW5 612 aaPredicted RBP13.59□□□□□ -0.23
LIN54-207ENST00000508171 GZF1Q9H116 711 aaPredicted RBP13.59□□□□□ -0.23
LIN54-207ENST00000508171 RTL1A6NKG5 1358 aa13.59□□□□□ -0.23
LIN54-207ENST00000508171 ARHGEF10O15013 1369 aa13.59□□□□□ -0.23
LIN54-207ENST00000508171 FLT4P35916 1363 aa13.59□□□□□ -0.23
LIN54-207ENST00000508171 CDC45O75419 566 aa13.58□□□□□ -0.23
LIN54-207ENST00000508171 NLRP6P59044 892 aa13.58□□□□□ -0.23
LIN54-207ENST00000508171 CEP170BQ9Y4F5 1589 aaPredicted RBP13.58□□□□□ -0.24
LIN54-207ENST00000508171 SBNO1A3KN83 1393 aa13.58□□□□□ -0.24
LIN54-207ENST00000508171 TTC22Q5TAA0 569 aa13.58□□□□□ -0.24
LIN54-207ENST00000508171 FOXD4L1Q9NU39 408 aa13.58□□□□□ -0.24
LIN54-207ENST00000508171 NCOA3Q9Y6Q9 1424 aa13.58□□□□□ -0.24
LIN54-207ENST00000508171 HSP90AB1P08238 724 aaKnown RBP13.57□□□□□ -0.24
LIN54-207ENST00000508171 DIP2AQ14689 1571 aa13.57□□□□□ -0.24
LIN54-207ENST00000508171 ARXQ96QS3 562 aa13.57□□□□□ -0.24
LIN54-207ENST00000508171 KDRP35968 1356 aa13.57□□□□□ -0.24
LIN54-207ENST00000508171 IGSF1Q8N6C5 1336 aa13.57□□□□□ -0.24
LIN54-207ENST00000508171 PIK3C2AO00443 1686 aa13.56□□□□□ -0.24
LIN54-207ENST00000508171 SLIT1O75093 1534 aa13.56□□□□□ -0.24
LIN54-207ENST00000508171 ARHGAP23Q9P227 1491 aa13.56□□□□□ -0.24
LIN54-207ENST00000508171 KCNA6P17658 529 aa13.56□□□□□ -0.24
LIN54-207ENST00000508171 THEMISQ8N1K5 641 aaPredicted RBP13.56□□□□□ -0.24
LIN54-207ENST00000508171 NECTIN2Q92692 538 aa13.56□□□□□ -0.24
LIN54-207ENST00000508171 TRAK2O60296 914 aa13.55□□□□□ -0.24
LIN54-207ENST00000508171 LTV1Q96GA3 475 aaPredicted RBP13.55□□□□□ -0.24
LIN54-207ENST00000508171 TNPO1Q92973 898 aaKnown RBP13.55□□□□□ -0.24
LIN54-207ENST00000508171 SETD1BQ9UPS6 1966 aaKnown RBP13.55□□□□□ -0.24
LIN54-207ENST00000508171 SDSP20132 328 aa13.54□□□□□ -0.24
LIN54-207ENST00000508171 GAS2L2Q8NHY3 880 aa13.54□□□□□ -0.24
LIN54-207ENST00000508171 HSP90AA1P07900 732 aaKnown RBP13.54□□□□□ -0.24
LIN54-207ENST00000508171 HOXC9P31274 260 aa13.54□□□□□ -0.24
LIN54-207ENST00000508171 ABTB2Q8N961 1025 aa13.54□□□□□ -0.24
LIN54-207ENST00000508171 K7ELQ4 463 aaPredicted RBP13.53□□□□□ -0.24
LIN54-207ENST00000508171 AK9Q5TCS8 1911 aa13.53□□□□□ -0.24
LIN54-207ENST00000508171 USP26Q9BXU7 913 aa13.53□□□□□ -0.24
LIN54-207ENST00000508171 GNAT3A8MTJ3 354 aa13.52□□□□□ -0.24
LIN54-207ENST00000508171 IL17REQ8NFR9 667 aa13.52□□□□□ -0.24
LIN54-207ENST00000508171 RBM33Q96EV2 1170 aaKnown RBP13.52□□□□□ -0.24
LIN54-207ENST00000508171 CCT4P50991 539 aaKnown RBP13.51□□□□□ -0.25
LIN54-207ENST00000508171 USHBP1Q8N6Y0 703 aa13.51□□□□□ -0.25
LIN54-207ENST00000508171 STK31Q9BXU1 1019 aa13.51□□□□□ -0.25
LIN54-207ENST00000508171 RAB3GAP1Q15042 981 aa13.51□□□□□ -0.25
LIN54-207ENST00000508171 C14orf37Q86TY3 774 aa13.51□□□□□ -0.25
LIN54-207ENST00000508171 EXOC6BQ9Y2D4 811 aa13.51□□□□□ -0.25
LIN54-207ENST00000508171 MARF1Q9Y4F3 1742 aaKnown RBP13.51□□□□□ -0.25
LIN54-207ENST00000508171 FER1L4A9Z1Z3 1794 aa13.51□□□□□ -0.25
LIN54-207ENST00000508171 XRCC6P12956 609 aaKnown RBP eCLIP13.5□□□□□ -0.25
LIN54-207ENST00000508171 FLIIQ13045 1269 aa13.5□□□□□ -0.25
LIN54-207ENST00000508171 FKBP5Q13451 457 aaPredicted RBP13.5□□□□□ -0.25
LIN54-207ENST00000508171 CIZ1Q9ULV3 898 aaPredicted RBP13.5□□□□□ -0.25
LIN54-207ENST00000508171 FSD2A1L4K1 749 aa13.49□□□□□ -0.25
LIN54-207ENST00000508171 DDX11L8A8MPP1 907 aa13.49□□□□□ -0.25
LIN54-207ENST00000508171 HTATSF1O43719 755 aaKnown RBP13.49□□□□□ -0.25
LIN54-207ENST00000508171 HMMRO75330 724 aa13.49□□□□□ -0.25
LIN54-207ENST00000508171 L1TD1Q5T7N2 865 aaKnown RBP13.49□□□□□ -0.25
LIN54-207ENST00000508171 XRN1Q8IZH2 1706 aaKnown RBP13.49□□□□□ -0.25
LIN54-207ENST00000508171 NWD1Q149M9 1564 aa13.49□□□□□ -0.25
LIN54-207ENST00000508171 GOLGA6L3A6NEY3 463 aa13.49□□□□□ -0.25
LIN54-207ENST00000508171 GNAI2P04899 355 aa13.49□□□□□ -0.25
LIN54-207ENST00000508171 CCDC30Q5VVM6 783 aa13.49□□□□□ -0.25
LIN54-207ENST00000508171 TSHZ3Q63HK5 1081 aa13.49□□□□□ -0.25
LIN54-207ENST00000508171 PNMA6EA0A0J9YXQ4 647 aa13.48□□□□□ -0.25
LIN54-207ENST00000508171 PDE1AP54750 535 aa13.48□□□□□ -0.25
LIN54-207ENST00000508171 RABEP1Q15276 862 aa13.47□□□□□ -0.25
LIN54-207ENST00000508171 TAF7Q15545 349 aaPredicted RBP13.47□□□□□ -0.25
LIN54-207ENST00000508171 PANK2Q9BZ23 570 aa13.47□□□□□ -0.25
LIN54-207ENST00000508171 SSFA2P28290 1259 aa13.47□□□□□ -0.25
LIN54-207ENST00000508171 ANKARQ7Z5J8 1434 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 176.1 ms