RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 TTC21BQ7Z4L5 1316 aa13.25□□□□□ -0.29
CAST-220ENST00000508117 ZNF827Q17R98 1081 aa13.25□□□□□ -0.29
CAST-220ENST00000508117 POLD1P28340 1107 aa13.24□□□□□ -0.29
CAST-220ENST00000508117 KAT6BQ8WYB5 2073 aa13.24□□□□□ -0.29
CAST-220ENST00000508117 SLC27A3Q5K4L6 730 aa13.23□□□□□ -0.29
CAST-220ENST00000508117 LRRC4BQ9NT99 713 aa13.23□□□□□ -0.29
CAST-220ENST00000508117 EVC2Q86UK5 1308 aa13.22□□□□□ -0.29
CAST-220ENST00000508117 ACSBG1Q96GR2 724 aa13.22□□□□□ -0.29
CAST-220ENST00000508117 GOLGB1Q14789 3259 aaKnown RBP13.22□□□□□ -0.29
CAST-220ENST00000508117 USP54Q70EL1 1684 aa13.21□□□□□ -0.29
CAST-220ENST00000508117 ERBB3P21860 1342 aa13.21□□□□□ -0.29
CAST-220ENST00000508117 HAX1O00165 279 aa13.21□□□□□ -0.29
CAST-220ENST00000508117 GRIN3BO60391 1043 aa13.21□□□□□ -0.29
CAST-220ENST00000508117 IL2RBP14784 551 aa13.21□□□□□ -0.29
CAST-220ENST00000508117 USP31Q70CQ4 1352 aa13.2□□□□□ -0.3
CAST-220ENST00000508117 PNPLA7Q6ZV29 1317 aa13.19□□□□□ -0.3
CAST-220ENST00000508117 TUBGCP6Q96RT7 1819 aa13.18□□□□□ -0.3
CAST-220ENST00000508117 NLRP2Q9NX02 1062 aa13.18□□□□□ -0.3
CAST-220ENST00000508117 MON2Q7Z3U7 1717 aa13.18□□□□□ -0.3
CAST-220ENST00000508117 LY75O60449 1722 aa13.17□□□□□ -0.3
CAST-220ENST00000508117 SOX12O15370 315 aa13.17□□□□□ -0.3
CAST-220ENST00000508117 PRKAR2AP13861 404 aaKnown RBP13.17□□□□□ -0.3
CAST-220ENST00000508117 NLGN2Q8NFZ4 835 aa13.17□□□□□ -0.3
CAST-220ENST00000508117 SP7Q8TDD2 431 aaPredicted RBP13.17□□□□□ -0.3
CAST-220ENST00000508117 LTN1O94822 1766 aa13.17□□□□□ -0.3
CAST-220ENST00000508117 PELP1Q8IZL8 1130 aaKnown RBP13.16□□□□□ -0.3
CAST-220ENST00000508117 KLHL34Q8N239 644 aa13.16□□□□□ -0.3
CAST-220ENST00000508117 TFCP2L1Q9NZI6 479 aa13.16□□□□□ -0.3
CAST-220ENST00000508117 KTN1Q86UP2 1357 aaKnown RBP13.16□□□□□ -0.3
CAST-220ENST00000508117 YBX3P16989 372 aaKnown RBP eCLIP13.15□□□□□ -0.35e-8■■■□□ 18.2
CAST-220ENST00000508117 FAM208AQ9UK61 1670 aaKnown RBP13.15□□□□□ -0.31
CAST-220ENST00000508117 ATP10DQ9P241 1426 aa13.14□□□□□ -0.31
CAST-220ENST00000508117 HSPA6P17066 643 aa13.14□□□□□ -0.31
CAST-220ENST00000508117 ANKRD36BQ8N2N9 1353 aa13.13□□□□□ -0.31
CAST-220ENST00000508117 ANKRD24Q8TF21 1146 aa13.13□□□□□ -0.31
CAST-220ENST00000508117 ADCY9O60503 1353 aa13.12□□□□□ -0.31
CAST-220ENST00000508117 PRR29P0C7W0 189 aa13.12□□□□□ -0.31
CAST-220ENST00000508117 HMGB2P26583 209 aaKnown RBP13.12□□□□□ -0.31
CAST-220ENST00000508117 GPBP1L1Q9HC44 474 aaPredicted RBP13.12□□□□□ -0.31
CAST-220ENST00000508117 CD2APQ9Y5K6 639 aa13.11□□□□□ -0.31
CAST-220ENST00000508117 DOT1LQ8TEK3 1739 aa13.1□□□□□ -0.31
CAST-220ENST00000508117 NSD2O96028 1365 aa13.1□□□□□ -0.31
CAST-220ENST00000508117 SBNO2Q9Y2G9 1366 aa13.1□□□□□ -0.31
CAST-220ENST00000508117 CD163L1Q9NR16 1453 aa13.1□□□□□ -0.31
CAST-220ENST00000508117 PRIM1P49642 420 aaKnown RBP13.09□□□□□ -0.31
CAST-220ENST00000508117 NME9Q86XW9 330 aa13.09□□□□□ -0.31
CAST-220ENST00000508117 COL23A1Q86Y22 540 aaPredicted RBP13.09□□□□□ -0.31
CAST-220ENST00000508117 DDX54Q8TDD1 881 aaKnown RBP13.09□□□□□ -0.31
CAST-220ENST00000508117 KCNQ4P56696 695 aa13.08□□□□□ -0.32
CAST-220ENST00000508117 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.08□□□□□ -0.32
CAST-220ENST00000508117 IP6K1Q92551 441 aa13.08□□□□□ -0.32
CAST-220ENST00000508117 CCNL1Q9UK58 526 aaPredicted RBP13.08□□□□□ -0.32
CAST-220ENST00000508117 EDC4Q6P2E9 1401 aaKnown RBP13.07□□□□□ -0.32
CAST-220ENST00000508117 FLAD1Q8NFF5 587 aa13.07□□□□□ -0.32
CAST-220ENST00000508117 SYTL4Q96C24 671 aaPredicted RBP13.07□□□□□ -0.32
CAST-220ENST00000508117 L3MBTL2Q969R5 705 aa13.06□□□□□ -0.32
CAST-220ENST00000508117 ROCK2O75116 1388 aaKnown RBP13.06□□□□□ -0.32
CAST-220ENST00000508117 USP47Q96K76 1375 aa13.06□□□□□ -0.32
CAST-220ENST00000508117 C5P01031 1676 aa13.05□□□□□ -0.32
CAST-220ENST00000508117 ZCRB1Q8TBF4 217 aaKnown RBP13.05□□□□□ -0.32
CAST-220ENST00000508117 TAF1LQ8IZX4 1826 aa13.04□□□□□ -0.32
CAST-220ENST00000508117 HDGFL2Q7Z4V5 671 aaPredicted RBP13.04□□□□□ -0.32
CAST-220ENST00000508117 CGNL1Q0VF96 1302 aa13.04□□□□□ -0.32
CAST-220ENST00000508117 KIF3CO14782 793 aa13.03□□□□□ -0.32
CAST-220ENST00000508117 PUS7Q96PZ0 661 aaKnown RBP13.03□□□□□ -0.32
CAST-220ENST00000508117 APLP1P51693 650 aa13.02□□□□□ -0.33
CAST-220ENST00000508117 MSL1Q68DK7 614 aa13.02□□□□□ -0.33
CAST-220ENST00000508117 CHADLQ6NUI6 762 aa13.02□□□□□ -0.33
CAST-220ENST00000508117 TERF2IPQ9NYB0 399 aa13.02□□□□□ -0.33
CAST-220ENST00000508117 MEGF6O75095 1541 aa13.02□□□□□ -0.33
CAST-220ENST00000508117 SPDYE4A6NLX3 237 aa13.01□□□□□ -0.33
CAST-220ENST00000508117 HOXC9P31274 260 aa13.01□□□□□ -0.33
CAST-220ENST00000508117 SLC12A5Q9H2X9 1139 aa13.01□□□□□ -0.33
CAST-220ENST00000508117 CICQ96RK0 1608 aaPredicted RBP13.01□□□□□ -0.33
CAST-220ENST00000508117 RGPD2P0DJD1 1756 aa13.01□□□□□ -0.33
CAST-220ENST00000508117 A0A1W2PP64 1363 aa13□□□□□ -0.33
CAST-220ENST00000508117 ZNF526Q8TF50 670 aaPredicted RBP13□□□□□ -0.33
CAST-220ENST00000508117 LTV1Q96GA3 475 aaPredicted RBP13□□□□□ -0.33
CAST-220ENST00000508117 NSD3Q9BZ95 1437 aa12.99□□□□□ -0.33
CAST-220ENST00000508117 RTL1A6NKG5 1358 aa12.99□□□□□ -0.33
CAST-220ENST00000508117 MAP3K19Q56UN5 1328 aa12.99□□□□□ -0.33
CAST-220ENST00000508117 IGSF1Q8N6C5 1336 aa12.99□□□□□ -0.33
CAST-220ENST00000508117 DNAJC5GQ8N7S2 189 aa12.99□□□□□ -0.33
CAST-220ENST00000508117 TMC1Q8TDI8 760 aa12.99□□□□□ -0.33
CAST-220ENST00000508117 UBR3Q6ZT12 1888 aa12.99□□□□□ -0.33
CAST-220ENST00000508117 C4BP0C0L5 1744 aa12.99□□□□□ -0.33
CAST-220ENST00000508117 PALLDQ8WX93 1383 aa12.98□□□□□ -0.33
CAST-220ENST00000508117 TOGARAM1Q9Y4F4 1720 aa12.98□□□□□ -0.33
CAST-220ENST00000508117 TOMM70O94826 608 aa12.97□□□□□ -0.33
CAST-220ENST00000508117 AMPHP49418 695 aa12.97□□□□□ -0.33
CAST-220ENST00000508117 COG3Q96JB2 828 aa12.97□□□□□ -0.33
CAST-220ENST00000508117 EVX2Q03828 476 aa12.96□□□□□ -0.33
CAST-220ENST00000508117 NBPF6Q5VWK0 638 aa12.96□□□□□ -0.33
CAST-220ENST00000508117 SMARCC1Q92922 1105 aaPredicted RBP12.96□□□□□ -0.33
CAST-220ENST00000508117 NBPF4Q96M43 638 aa12.96□□□□□ -0.33
CAST-220ENST00000508117 PCDH11XQ9BZA7 1347 aa12.95□□□□□ -0.34
CAST-220ENST00000508117 PCDH11YQ9BZA8 1340 aa12.95□□□□□ -0.34
CAST-220ENST00000508117 RAPGEF4Q8WZA2 1011 aa12.95□□□□□ -0.34
CAST-220ENST00000508117 AK7Q96M32 723 aa12.95□□□□□ -0.34
CAST-220ENST00000508117 KIF13BQ9NQT8 1826 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms