RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 EIF4A2Q14240 407 aaKnown RBP21.18■□□□□ 0.98
COL1A1-211ENST00000507689 SYTL4Q96C24 671 aaPredicted RBP21.18■□□□□ 0.98
COL1A1-211ENST00000507689 PCDH11XQ9BZA7 1347 aa21.18■□□□□ 0.98
COL1A1-211ENST00000507689 PCDH11YQ9BZA8 1340 aa21.18■□□□□ 0.98
COL1A1-211ENST00000507689 RGPD2P0DJD1 1756 aa21.18■□□□□ 0.98
COL1A1-211ENST00000507689 EYA1Q99502 592 aa21.17■□□□□ 0.98
COL1A1-211ENST00000507689 MEGF6O75095 1541 aa21.17■□□□□ 0.98
COL1A1-211ENST00000507689 NPC1L1Q9UHC9 1359 aa21.15■□□□□ 0.98
COL1A1-211ENST00000507689 SBF2Q86WG5 1849 aa21.14■□□□□ 0.97
COL1A1-211ENST00000507689 KCNQ2O43526 872 aa21.14■□□□□ 0.97
COL1A1-211ENST00000507689 MTHFSP49914 203 aa21.13■□□□□ 0.97
COL1A1-211ENST00000507689 PSDA5PKW4 1024 aaPredicted RBP21.12■□□□□ 0.97
COL1A1-211ENST00000507689 R3HDM1Q15032 1099 aaKnown RBP21.11■□□□□ 0.97
COL1A1-211ENST00000507689 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.11■□□□□ 0.97
COL1A1-211ENST00000507689 NHSQ6T4R5 1651 aa21.1■□□□□ 0.97
COL1A1-211ENST00000507689 PRIM1P49642 420 aaKnown RBP21.1■□□□□ 0.97
COL1A1-211ENST00000507689 PTF1AQ7RTS3 328 aa21.1■□□□□ 0.97
COL1A1-211ENST00000507689 IGSF1Q8N6C5 1336 aa21.09■□□□□ 0.97
COL1A1-211ENST00000507689 PLEKHO1Q53GL0 409 aaPredicted RBP21.09■□□□□ 0.97
COL1A1-211ENST00000507689 CFAP53Q96M91 514 aa21.09■□□□□ 0.97
COL1A1-211ENST00000507689 KAT6BQ8WYB5 2073 aa21.09■□□□□ 0.97
COL1A1-211ENST00000507689 RGPD3A6NKT7 1758 aaPredicted RBP21.08■□□□□ 0.97
COL1A1-211ENST00000507689 RGPD4Q7Z3J3 1758 aa21.08■□□□□ 0.97
COL1A1-211ENST00000507689 TXNRD1Q16881 649 aa21.08■□□□□ 0.97
COL1A1-211ENST00000507689 PLEKHG2Q9H7P9 1386 aa21.08■□□□□ 0.96
COL1A1-211ENST00000507689 NCAPD2Q15021 1401 aa21.07■□□□□ 0.96
COL1A1-211ENST00000507689 DIAPH1O60610 1272 aaKnown RBP21.07■□□□□ 0.96
COL1A1-211ENST00000507689 HMGB2P26583 209 aaKnown RBP21.07■□□□□ 0.96
COL1A1-211ENST00000507689 AMOTQ4VCS5 1084 aa21.07■□□□□ 0.96
COL1A1-211ENST00000507689 IFNL2Q8IZJ0 200 aa21.07■□□□□ 0.96
COL1A1-211ENST00000507689 SULT6B1Q6IMI4 303 aa21.06■□□□□ 0.96
COL1A1-211ENST00000507689 STK32BQ9NY57 414 aa21.06■□□□□ 0.96
COL1A1-211ENST00000507689 HSP90AB1P08238 724 aaKnown RBP21.05■□□□□ 0.96
COL1A1-211ENST00000507689 RREB1Q92766 1687 aa21.05■□□□□ 0.96
COL1A1-211ENST00000507689 CYP27B1O15528 508 aa21.04■□□□□ 0.96
COL1A1-211ENST00000507689 IL13P35225 146 aa21.04■□□□□ 0.96
COL1A1-211ENST00000507689 C1orf141Q5JVX7 400 aa21.04■□□□□ 0.96
COL1A1-211ENST00000507689 SLC27A3Q5K4L6 730 aa21.03■□□□□ 0.96
COL1A1-211ENST00000507689 MPRIPQ6WCQ1 1025 aa21.03■□□□□ 0.96
COL1A1-211ENST00000507689 NUP188Q5SRE5 1749 aa21.02■□□□□ 0.96
COL1A1-211ENST00000507689 DOT1LQ8TEK3 1739 aa21.02■□□□□ 0.96
COL1A1-211ENST00000507689 BTAF1O14981 1849 aa21.01■□□□□ 0.95
COL1A1-211ENST00000507689 PKD1L3Q7Z443 1732 aa21.01■□□□□ 0.95
COL1A1-211ENST00000507689 SHANK3Q9BYB0 1731 aa21.01■□□□□ 0.95
COL1A1-211ENST00000507689 U2SURPO15042 1029 aaKnown RBP21.01■□□□□ 0.95
COL1A1-211ENST00000507689 ZNF530Q6P9A1 599 aaPredicted RBP21.01■□□□□ 0.95
COL1A1-211ENST00000507689 NUDCQ9Y266 331 aa21.01■□□□□ 0.95
COL1A1-211ENST00000507689 PHKG2P15735 406 aa21■□□□□ 0.95
COL1A1-211ENST00000507689 NKX1-1Q15270 411 aaPredicted RBP21■□□□□ 0.95
COL1A1-211ENST00000507689 PROM2Q8N271 834 aa21■□□□□ 0.95
COL1A1-211ENST00000507689 SMARCC1Q92922 1105 aaPredicted RBP21■□□□□ 0.95
COL1A1-211ENST00000507689 TMOD3Q9NYL9 352 aa21■□□□□ 0.95
COL1A1-211ENST00000507689 AEBP1Q8IUX7 1158 aa20.99■□□□□ 0.95
COL1A1-211ENST00000507689 HMOX1P09601 288 aa20.97■□□□□ 0.95
COL1A1-211ENST00000507689 DCAF5Q96JK2 942 aa20.97■□□□□ 0.95
COL1A1-211ENST00000507689 CCNL1Q9UK58 526 aaPredicted RBP20.97■□□□□ 0.95
COL1A1-211ENST00000507689 SLC15A2Q16348 729 aa20.96■□□□□ 0.95
COL1A1-211ENST00000507689 KDRP35968 1356 aa20.96■□□□□ 0.95
COL1A1-211ENST00000507689 PPP2R1AP30153 589 aa20.95■□□□□ 0.94
COL1A1-211ENST00000507689 DDX10Q13206 875 aaKnown RBP20.95■□□□□ 0.94
COL1A1-211ENST00000507689 ANO8Q9HCE9 1232 aaPredicted RBP20.94■□□□□ 0.94
COL1A1-211ENST00000507689 ERVV-2B6SEH9 535 aa20.93■□□□□ 0.94
COL1A1-211ENST00000507689 CABP4P57796 275 aa20.93■□□□□ 0.94
COL1A1-211ENST00000507689 SPON1Q9HCB6 807 aa20.93■□□□□ 0.94
COL1A1-211ENST00000507689 PALLDQ8WX93 1383 aa20.93■□□□□ 0.94
COL1A1-211ENST00000507689 PIGBQ92521 554 aa20.92■□□□□ 0.94
COL1A1-211ENST00000507689 NEFMP07197 916 aa20.91■□□□□ 0.94
COL1A1-211ENST00000507689 AKAP4Q5JQC9 854 aa20.91■□□□□ 0.94
COL1A1-211ENST00000507689 TFCP2L1Q9NZI6 479 aa20.91■□□□□ 0.94
COL1A1-211ENST00000507689 PPP1R1BQ9UD71 204 aaPredicted RBP20.91■□□□□ 0.94
COL1A1-211ENST00000507689 RALBP1Q15311 655 aa20.9■□□□□ 0.94
COL1A1-211ENST00000507689 LRRC4BQ9NT99 713 aa20.9■□□□□ 0.94
COL1A1-211ENST00000507689 U2AF1L5P0DN76 240 aaPredicted RBP20.89■□□□□ 0.93
COL1A1-211ENST00000507689 U2AF1Q01081 240 aaKnown RBP eCLIP20.89■□□□□ 0.93
COL1A1-211ENST00000507689 GAS2L2Q8NHY3 880 aa20.88■□□□□ 0.93
COL1A1-211ENST00000507689 LRP5O75197 1615 aa20.87■□□□□ 0.93
COL1A1-211ENST00000507689 KCNQ4P56696 695 aa20.87■□□□□ 0.93
COL1A1-211ENST00000507689 COL3A1P02461 1466 aaPredicted RBP20.87■□□□□ 0.93
COL1A1-211ENST00000507689 MSH5O43196 834 aa20.86■□□□□ 0.93
COL1A1-211ENST00000507689 ITGB4P16144 1822 aa20.85■□□□□ 0.93
COL1A1-211ENST00000507689 TOGARAM1Q9Y4F4 1720 aa20.85■□□□□ 0.93
COL1A1-211ENST00000507689 LY75O60449 1722 aa20.84■□□□□ 0.93
COL1A1-211ENST00000507689 LOC102724428A0A0B4J2F2 783 aa20.84■□□□□ 0.93
COL1A1-211ENST00000507689 ZBTB7AO95365 584 aa20.84■□□□□ 0.93
COL1A1-211ENST00000507689 SIK1P57059 783 aa20.84■□□□□ 0.93
COL1A1-211ENST00000507689 ZNF827Q17R98 1081 aa20.84■□□□□ 0.93
COL1A1-211ENST00000507689 MTHFSDQ2M296 383 aaKnown RBP20.84■□□□□ 0.93
COL1A1-211ENST00000507689 AKT1S1Q96B36 256 aa20.84■□□□□ 0.93
COL1A1-211ENST00000507689 AK7Q96M32 723 aa20.84■□□□□ 0.93
COL1A1-211ENST00000507689 RBM42Q9BTD8 480 aaKnown RBP20.84■□□□□ 0.93
COL1A1-211ENST00000507689 ASAP1Q9ULH1 1129 aa20.84■□□□□ 0.93
COL1A1-211ENST00000507689 PRKAR2BP31323 418 aa20.83■□□□□ 0.93
COL1A1-211ENST00000507689 ATP6V1AP38606 617 aa20.83■□□□□ 0.93
COL1A1-211ENST00000507689 FLAD1Q8NFF5 587 aa20.83■□□□□ 0.93
COL1A1-211ENST00000507689 MTFR1LQ9H019 292 aa20.83■□□□□ 0.93
COL1A1-211ENST00000507689 PNNQ9H307 717 aaKnown RBP20.83■□□□□ 0.93
COL1A1-211ENST00000507689 FCHSD2O94868 740 aa20.82■□□□□ 0.92
COL1A1-211ENST00000507689 NFATC2IPQ8NCF5 419 aa20.82■□□□□ 0.92
COL1A1-211ENST00000507689 SLC16A10Q8TF71 515 aa20.82■□□□□ 0.92
COL1A1-211ENST00000507689 ATG3Q9NT62 314 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms