RNA–Protein interactions for RNA: ENST00000507046.5

DDR1-259, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-259ENST00000507046 DEFB132Q7Z7B7 95 aa26.81■■□□□ 1.88
DDR1-259ENST00000507046 PCDH11XQ9BZA7 1347 aa26.81■■□□□ 1.88
DDR1-259ENST00000507046 PCDH11YQ9BZA8 1340 aa26.81■■□□□ 1.88
DDR1-259ENST00000507046 PKD1L3Q7Z443 1732 aa26.81■■□□□ 1.88
DDR1-259ENST00000507046 IL13P35225 146 aa26.8■■□□□ 1.88
DDR1-259ENST00000507046 PLEKHG2Q9H7P9 1386 aa26.8■■□□□ 1.88
DDR1-259ENST00000507046 DIAPH1O60610 1272 aaKnown RBP26.79■■□□□ 1.88
DDR1-259ENST00000507046 NHSQ6T4R5 1651 aa26.79■■□□□ 1.88
DDR1-259ENST00000507046 APBA3O96018 575 aa26.78■■□□□ 1.88
DDR1-259ENST00000507046 PPP2R1AP30153 589 aa26.78■■□□□ 1.88
DDR1-259ENST00000507046 CFAP53Q96M91 514 aa26.78■■□□□ 1.88
DDR1-259ENST00000507046 BCL11BQ9C0K0 894 aaPredicted RBP26.78■■□□□ 1.88
DDR1-259ENST00000507046 PARD3Q8TEW0 1356 aa26.78■■□□□ 1.88
DDR1-259ENST00000507046 COL3A1P02461 1466 aaPredicted RBP26.77■■□□□ 1.88
DDR1-259ENST00000507046 SPG7Q9UQ90 795 aa26.77■■□□□ 1.88
DDR1-259ENST00000507046 ZNF316A6NFI3 1004 aaPredicted RBP26.75■■□□□ 1.87
DDR1-259ENST00000507046 EN1Q05925 392 aaPredicted RBP26.75■■□□□ 1.87
DDR1-259ENST00000507046 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.75■■□□□ 1.87
DDR1-259ENST00000507046 SULT6B1Q6IMI4 303 aa26.74■■□□□ 1.87
DDR1-259ENST00000507046 ACSBG1Q96GR2 724 aa26.74■■□□□ 1.87
DDR1-259ENST00000507046 KDRP35968 1356 aa26.73■■□□□ 1.87
DDR1-259ENST00000507046 DOT1LQ8TEK3 1739 aa26.73■■□□□ 1.87
DDR1-259ENST00000507046 AEBP1Q8IUX7 1158 aa26.72■■□□□ 1.87
DDR1-259ENST00000507046 RALBP1Q15311 655 aa26.71■■□□□ 1.87
DDR1-259ENST00000507046 RGPD3A6NKT7 1758 aaPredicted RBP26.71■■□□□ 1.87
DDR1-259ENST00000507046 RGPD4Q7Z3J3 1758 aa26.71■■□□□ 1.87
DDR1-259ENST00000507046 CYP27B1O15528 508 aa26.69■■□□□ 1.86
DDR1-259ENST00000507046 KCNQ2O43526 872 aa26.69■■□□□ 1.86
DDR1-259ENST00000507046 U2SURPO15042 1029 aaKnown RBP26.68■■□□□ 1.86
DDR1-259ENST00000507046 EZH2Q15910 746 aaKnown RBP26.68■■□□□ 1.86
DDR1-259ENST00000507046 AMOTQ4VCS5 1084 aa26.68■■□□□ 1.86
DDR1-259ENST00000507046 PLEKHO1Q53GL0 409 aaPredicted RBP26.68■■□□□ 1.86
DDR1-259ENST00000507046 PTF1AQ7RTS3 328 aa26.68■■□□□ 1.86
DDR1-259ENST00000507046 CAMKK2Q96RR4 588 aa26.68■■□□□ 1.86
DDR1-259ENST00000507046 SYTL4Q96C24 671 aaPredicted RBP26.67■■□□□ 1.86
DDR1-259ENST00000507046 NUDCQ9Y266 331 aa26.67■■□□□ 1.86
DDR1-259ENST00000507046 PLSCR1O15162 318 aa26.66■■□□□ 1.86
DDR1-259ENST00000507046 HMOX1P09601 288 aa26.66■■□□□ 1.86
DDR1-259ENST00000507046 IFNL2Q8IZJ0 200 aa26.66■■□□□ 1.86
DDR1-259ENST00000507046 BTAF1O14981 1849 aa26.66■■□□□ 1.86
DDR1-259ENST00000507046 RREB1Q92766 1687 aa26.66■■□□□ 1.86
DDR1-259ENST00000507046 KAT6BQ8WYB5 2073 aa26.65■■□□□ 1.86
DDR1-259ENST00000507046 PHKG2P15735 406 aa26.64■■□□□ 1.86
DDR1-259ENST00000507046 PRIM1P49642 420 aaKnown RBP26.64■■□□□ 1.86
DDR1-259ENST00000507046 NKX1-1Q15270 411 aaPredicted RBP26.62■■□□□ 1.85
DDR1-259ENST00000507046 ZNF530Q6P9A1 599 aaPredicted RBP26.62■■□□□ 1.85
DDR1-259ENST00000507046 TOGARAM1Q9Y4F4 1720 aa26.61■■□□□ 1.85
DDR1-259ENST00000507046 MYBBP1AQ9BQG0 1328 aaKnown RBP26.61■■□□□ 1.85
DDR1-259ENST00000507046 NUP188Q5SRE5 1749 aa26.6■■□□□ 1.85
DDR1-259ENST00000507046 HSP90AB1P08238 724 aaKnown RBP26.6■■□□□ 1.85
DDR1-259ENST00000507046 C1orf141Q5JVX7 400 aa26.6■■□□□ 1.85
DDR1-259ENST00000507046 U2AF1L5P0DN76 240 aaPredicted RBP26.57■■□□□ 1.84
DDR1-259ENST00000507046 U2AF1Q01081 240 aaKnown RBP eCLIP26.57■■□□□ 1.84
DDR1-259ENST00000507046 TXNRD1Q16881 649 aa26.55■■□□□ 1.84
DDR1-259ENST00000507046 DCAF5Q96JK2 942 aa26.55■■□□□ 1.84
DDR1-259ENST00000507046 PRKRIP1Q9H875 184 aaPredicted RBP26.55■■□□□ 1.84
DDR1-259ENST00000507046 ITGB4P16144 1822 aa26.55■■□□□ 1.84
DDR1-259ENST00000507046 MPRIPQ6WCQ1 1025 aa26.54■■□□□ 1.84
DDR1-259ENST00000507046 NBPF14Q5TI25 921 aa26.53■■□□□ 1.84
DDR1-259ENST00000507046 AKAP4Q5JQC9 854 aa26.52■■□□□ 1.84
DDR1-259ENST00000507046 RSPH6AQ9H0K4 717 aa26.52■■□□□ 1.84
DDR1-259ENST00000507046 TMOD3Q9NYL9 352 aa26.52■■□□□ 1.84
DDR1-259ENST00000507046 KDM6AO15550 1401 aaPredicted RBP26.51■■□□□ 1.83
DDR1-259ENST00000507046 PRKAR2BP31323 418 aa26.51■■□□□ 1.83
DDR1-259ENST00000507046 ERVV-2B6SEH9 535 aa26.5■■□□□ 1.83
DDR1-259ENST00000507046 FCHSD2O94868 740 aa26.5■■□□□ 1.83
DDR1-259ENST00000507046 MTHFSDQ2M296 383 aaKnown RBP26.5■■□□□ 1.83
DDR1-259ENST00000507046 PROM2Q8N271 834 aa26.5■■□□□ 1.83
DDR1-259ENST00000507046 LY75O60449 1722 aa26.49■■□□□ 1.83
DDR1-259ENST00000507046 GAS2L2Q8NHY3 880 aa26.49■■□□□ 1.83
DDR1-259ENST00000507046 SLC27A3Q5K4L6 730 aa26.48■■□□□ 1.83
DDR1-259ENST00000507046 PIGBQ92521 554 aa26.48■■□□□ 1.83
DDR1-259ENST00000507046 SMARCC1Q92922 1105 aaPredicted RBP26.47■■□□□ 1.83
DDR1-259ENST00000507046 PALLDQ8WX93 1383 aa26.46■■□□□ 1.83
DDR1-259ENST00000507046 SCN11AQ9UI33 1791 aa26.46■■□□□ 1.83
DDR1-259ENST00000507046 CABP4P57796 275 aa26.46■■□□□ 1.83
DDR1-259ENST00000507046 PSDA5PKW4 1024 aaPredicted RBP26.45■■□□□ 1.82
DDR1-259ENST00000507046 NEFMP07197 916 aa26.45■■□□□ 1.82
DDR1-259ENST00000507046 R3HDM1Q15032 1099 aaKnown RBP26.45■■□□□ 1.82
DDR1-259ENST00000507046 MAP3K5Q99683 1374 aa26.44■■□□□ 1.82
DDR1-259ENST00000507046 PAPPAQ13219 1627 aa26.43■■□□□ 1.82
DDR1-259ENST00000507046 CCNL1Q9UK58 526 aaPredicted RBP26.43■■□□□ 1.82
DDR1-259ENST00000507046 PHACTR3Q96KR7 559 aa26.42■■□□□ 1.82
DDR1-259ENST00000507046 PNNQ9H307 717 aaKnown RBP26.42■■□□□ 1.82
DDR1-259ENST00000507046 ANO8Q9HCE9 1232 aaPredicted RBP26.42■■□□□ 1.82
DDR1-259ENST00000507046 STK32BQ9NY57 414 aa26.42■■□□□ 1.82
DDR1-259ENST00000507046 ANP32CO43423 234 aa26.41■■□□□ 1.82
DDR1-259ENST00000507046 LRRC4BQ9NT99 713 aa26.41■■□□□ 1.82
DDR1-259ENST00000507046 MRC1P22897 1456 aa26.41■■□□□ 1.82
DDR1-259ENST00000507046 ADAMTS7Q9UKP4 1686 aa26.41■■□□□ 1.82
DDR1-259ENST00000507046 VIRMAQ69YN4 1812 aaKnown RBP26.4■■□□□ 1.82
DDR1-259ENST00000507046 GNAT3A8MTJ3 354 aa26.4■■□□□ 1.82
DDR1-259ENST00000507046 RNMTO43148 476 aaKnown RBP26.4■■□□□ 1.82
DDR1-259ENST00000507046 HMGB2P26583 209 aaKnown RBP26.39■■□□□ 1.82
DDR1-259ENST00000507046 WDR43Q15061 677 aaKnown RBP eCLIP26.38■■□□□ 1.81
DDR1-259ENST00000507046 ASAP1Q9ULH1 1129 aa26.38■■□□□ 1.81
DDR1-259ENST00000507046 MAPK8IP3Q9UPT6 1336 aa26.38■■□□□ 1.81
DDR1-259ENST00000507046 SLC15A2Q16348 729 aa26.37■■□□□ 1.81
DDR1-259ENST00000507046 NFATC2IPQ8NCF5 419 aa26.37■■□□□ 1.81
DDR1-259ENST00000507046 SLC52A2Q9HAB3 445 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms