RNA–Protein interactions for RNA: ENST00000506724.1

TSC22D3-214, Transcript of TSC22 domain family member 3, humanhuman

TSL 4

Gene TSC22D3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-214ENST00000506724 CNGB1Q14028 1251 aaPredicted RBP17.4■□□□□ 0.38
TSC22D3-214ENST00000506724 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.4■□□□□ 0.38
TSC22D3-214ENST00000506724 SPG7Q9UQ90 795 aa17.4■□□□□ 0.38
TSC22D3-214ENST00000506724 IGSF1Q8N6C5 1336 aa17.4■□□□□ 0.38
TSC22D3-214ENST00000506724 EN1Q05925 392 aaPredicted RBP17.39■□□□□ 0.37
TSC22D3-214ENST00000506724 RGPD2P0DJD1 1756 aa17.38■□□□□ 0.37
TSC22D3-214ENST00000506724 CFAP53Q96M91 514 aa17.38■□□□□ 0.37
TSC22D3-214ENST00000506724 TNS1Q9HBL0 1735 aaKnown RBP17.38■□□□□ 0.37
TSC22D3-214ENST00000506724 PLSCR1O15162 318 aa17.37■□□□□ 0.37
TSC22D3-214ENST00000506724 DIAPH1O60610 1272 aaKnown RBP17.37■□□□□ 0.37
TSC22D3-214ENST00000506724 IL13P35225 146 aa17.36■□□□□ 0.37
TSC22D3-214ENST00000506724 CAMKK2Q96RR4 588 aa17.36■□□□□ 0.37
TSC22D3-214ENST00000506724 ACSBG1Q96GR2 724 aa17.35■□□□□ 0.37
TSC22D3-214ENST00000506724 DDX10Q13206 875 aaKnown RBP17.34■□□□□ 0.37
TSC22D3-214ENST00000506724 EZH2Q15910 746 aaKnown RBP17.34■□□□□ 0.37
TSC22D3-214ENST00000506724 AMOTQ4VCS5 1084 aa17.34■□□□□ 0.37
TSC22D3-214ENST00000506724 PLEKHO1Q53GL0 409 aaPredicted RBP17.34■□□□□ 0.37
TSC22D3-214ENST00000506724 SULT6B1Q6IMI4 303 aa17.33■□□□□ 0.36
TSC22D3-214ENST00000506724 NBPF14Q5TI25 921 aa17.32■□□□□ 0.36
TSC22D3-214ENST00000506724 IFNL2Q8IZJ0 200 aa17.32■□□□□ 0.36
TSC22D3-214ENST00000506724 NUDCQ9Y266 331 aa17.32■□□□□ 0.36
TSC22D3-214ENST00000506724 SBF2Q86WG5 1849 aa17.32■□□□□ 0.36
TSC22D3-214ENST00000506724 NHSQ6T4R5 1651 aa17.32■□□□□ 0.36
TSC22D3-214ENST00000506724 KDRP35968 1356 aa17.31■□□□□ 0.36
TSC22D3-214ENST00000506724 KCNQ2O43526 872 aa17.31■□□□□ 0.36
TSC22D3-214ENST00000506724 HSP90AB1P08238 724 aaKnown RBP17.31■□□□□ 0.36
TSC22D3-214ENST00000506724 PPP2R1AP30153 589 aa17.31■□□□□ 0.36
TSC22D3-214ENST00000506724 RALBP1Q15311 655 aa17.31■□□□□ 0.36
TSC22D3-214ENST00000506724 SYTL4Q96C24 671 aaPredicted RBP17.31■□□□□ 0.36
TSC22D3-214ENST00000506724 PKD1L3Q7Z443 1732 aa17.3■□□□□ 0.36
TSC22D3-214ENST00000506724 CYP27B1O15528 508 aa17.3■□□□□ 0.36
TSC22D3-214ENST00000506724 PRIM1P49642 420 aaKnown RBP17.3■□□□□ 0.36
TSC22D3-214ENST00000506724 RGPD3A6NKT7 1758 aaPredicted RBP17.3■□□□□ 0.36
TSC22D3-214ENST00000506724 RGPD4Q7Z3J3 1758 aa17.3■□□□□ 0.36
TSC22D3-214ENST00000506724 HMGB2P26583 209 aaKnown RBP17.29■□□□□ 0.36
TSC22D3-214ENST00000506724 NKX1-1Q15270 411 aaPredicted RBP17.29■□□□□ 0.36
TSC22D3-214ENST00000506724 SHANK3Q9BYB0 1731 aa17.28■□□□□ 0.36
TSC22D3-214ENST00000506724 U2SURPO15042 1029 aaKnown RBP17.28■□□□□ 0.36
TSC22D3-214ENST00000506724 PHKG2P15735 406 aa17.28■□□□□ 0.36
TSC22D3-214ENST00000506724 C1orf141Q5JVX7 400 aa17.28■□□□□ 0.36
TSC22D3-214ENST00000506724 PTF1AQ7RTS3 328 aa17.28■□□□□ 0.36
TSC22D3-214ENST00000506724 AEBP1Q8IUX7 1158 aa17.27■□□□□ 0.36
TSC22D3-214ENST00000506724 COL3A1P02461 1466 aaPredicted RBP17.26■□□□□ 0.35
TSC22D3-214ENST00000506724 ZNF316A6NFI3 1004 aaPredicted RBP17.26■□□□□ 0.35
TSC22D3-214ENST00000506724 TXNRD1Q16881 649 aa17.26■□□□□ 0.35
TSC22D3-214ENST00000506724 ZNF530Q6P9A1 599 aaPredicted RBP17.26■□□□□ 0.35
TSC22D3-214ENST00000506724 HMOX1P09601 288 aa17.25■□□□□ 0.35
TSC22D3-214ENST00000506724 SLC27A3Q5K4L6 730 aa17.25■□□□□ 0.35
TSC22D3-214ENST00000506724 DCAF5Q96JK2 942 aa17.25■□□□□ 0.35
TSC22D3-214ENST00000506724 DOT1LQ8TEK3 1739 aa17.24■□□□□ 0.35
TSC22D3-214ENST00000506724 RREB1Q92766 1687 aa17.24■□□□□ 0.35
TSC22D3-214ENST00000506724 SMARCC1Q92922 1105 aaPredicted RBP17.24■□□□□ 0.35
TSC22D3-214ENST00000506724 MPRIPQ6WCQ1 1025 aa17.23■□□□□ 0.35
TSC22D3-214ENST00000506724 TMOD3Q9NYL9 352 aa17.23■□□□□ 0.35
TSC22D3-214ENST00000506724 BTAF1O14981 1849 aa17.22■□□□□ 0.35
TSC22D3-214ENST00000506724 ERVV-2B6SEH9 535 aa17.22■□□□□ 0.35
TSC22D3-214ENST00000506724 AKAP4Q5JQC9 854 aa17.22■□□□□ 0.35
TSC22D3-214ENST00000506724 KAT6BQ8WYB5 2073 aa17.21■□□□□ 0.35
TSC22D3-214ENST00000506724 U2AF1L5P0DN76 240 aaPredicted RBP17.21■□□□□ 0.35
TSC22D3-214ENST00000506724 U2AF1Q01081 240 aaKnown RBP eCLIP17.21■□□□□ 0.35
TSC22D3-214ENST00000506724 PROM2Q8N271 834 aa17.21■□□□□ 0.35
TSC22D3-214ENST00000506724 STK32BQ9NY57 414 aa17.21■□□□□ 0.35
TSC22D3-214ENST00000506724 MYBBP1AQ9BQG0 1328 aaKnown RBP17.21■□□□□ 0.34
TSC22D3-214ENST00000506724 NEFMP07197 916 aa17.2■□□□□ 0.34
TSC22D3-214ENST00000506724 R3HDM1Q15032 1099 aaKnown RBP17.2■□□□□ 0.34
TSC22D3-214ENST00000506724 GAS2L2Q8NHY3 880 aa17.2■□□□□ 0.34
TSC22D3-214ENST00000506724 NUP188Q5SRE5 1749 aa17.2■□□□□ 0.34
TSC22D3-214ENST00000506724 FCHSD2O94868 740 aa17.19■□□□□ 0.34
TSC22D3-214ENST00000506724 PNNQ9H307 717 aaKnown RBP17.19■□□□□ 0.34
TSC22D3-214ENST00000506724 PSDA5PKW4 1024 aaPredicted RBP17.18■□□□□ 0.34
TSC22D3-214ENST00000506724 CABP4P57796 275 aa17.18■□□□□ 0.34
TSC22D3-214ENST00000506724 PIGBQ92521 554 aa17.18■□□□□ 0.34
TSC22D3-214ENST00000506724 PALLDQ8WX93 1383 aa17.17■□□□□ 0.34
TSC22D3-214ENST00000506724 CCNL1Q9UK58 526 aaPredicted RBP17.17■□□□□ 0.34
TSC22D3-214ENST00000506724 PRKAR2BP31323 418 aa17.16■□□□□ 0.34
TSC22D3-214ENST00000506724 SLC15A2Q16348 729 aa17.16■□□□□ 0.34
TSC22D3-214ENST00000506724 MTHFSDQ2M296 383 aaKnown RBP17.16■□□□□ 0.34
TSC22D3-214ENST00000506724 RSPH6AQ9H0K4 717 aa17.16■□□□□ 0.34
TSC22D3-214ENST00000506724 PRKRIP1Q9H875 184 aaPredicted RBP17.16■□□□□ 0.34
TSC22D3-214ENST00000506724 KDM6AO15550 1401 aaPredicted RBP17.14■□□□□ 0.33
TSC22D3-214ENST00000506724 TOGARAM1Q9Y4F4 1720 aa17.14■□□□□ 0.33
TSC22D3-214ENST00000506724 ANO8Q9HCE9 1232 aaPredicted RBP17.14■□□□□ 0.33
TSC22D3-214ENST00000506724 GNAT3A8MTJ3 354 aa17.13■□□□□ 0.33
TSC22D3-214ENST00000506724 LRRC4BQ9NT99 713 aa17.13■□□□□ 0.33
TSC22D3-214ENST00000506724 MAP3K5Q99683 1374 aa17.13■□□□□ 0.33
TSC22D3-214ENST00000506724 RNMTO43148 476 aaKnown RBP17.12■□□□□ 0.33
TSC22D3-214ENST00000506724 LY75O60449 1722 aa17.12■□□□□ 0.33
TSC22D3-214ENST00000506724 ITGB4P16144 1822 aa17.12■□□□□ 0.33
TSC22D3-214ENST00000506724 LOC102724428A0A0B4J2F2 783 aa17.11■□□□□ 0.33
TSC22D3-214ENST00000506724 SIK1P57059 783 aa17.11■□□□□ 0.33
TSC22D3-214ENST00000506724 NFATC2IPQ8NCF5 419 aa17.11■□□□□ 0.33
TSC22D3-214ENST00000506724 SLC52A2Q9HAB3 445 aa17.11■□□□□ 0.33
TSC22D3-214ENST00000506724 RTF1Q92541 710 aaKnown RBP17.1■□□□□ 0.33
TSC22D3-214ENST00000506724 ATG3Q9NT62 314 aa17.1■□□□□ 0.33
TSC22D3-214ENST00000506724 ASAP1Q9ULH1 1129 aa17.1■□□□□ 0.33
TSC22D3-214ENST00000506724 MAPK8IP3Q9UPT6 1336 aa17.1■□□□□ 0.33
TSC22D3-214ENST00000506724 TEFQ10587 303 aa17.09■□□□□ 0.33
TSC22D3-214ENST00000506724 WDR43Q15061 677 aaKnown RBP eCLIP17.09■□□□□ 0.33
TSC22D3-214ENST00000506724 AKT1S1Q96B36 256 aa17.09■□□□□ 0.33
TSC22D3-214ENST00000506724 PHACTR3Q96KR7 559 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms