RNA–Protein interactions for RNA: ENST00000506691.1

SNCA-210, Transcript of synuclein alpha, humanhuman

TSL 5

Gene SNCA, Length 387 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-210ENST00000506691 LY75O60449 1722 aa14.86□□□□□ -0.03
SNCA-210ENST00000506691 SENP3-EIF4A1A0A087X0R7 540 aa14.85□□□□□ -0.03
SNCA-210ENST00000506691 LRRC4BQ9NT99 713 aa14.85□□□□□ -0.03
SNCA-210ENST00000506691 GRIN3BO60391 1043 aa14.84□□□□□ -0.03
SNCA-210ENST00000506691 ZNF827Q17R98 1081 aa14.84□□□□□ -0.03
SNCA-210ENST00000506691 ANKRD24Q8TF21 1146 aa14.84□□□□□ -0.03
SNCA-210ENST00000506691 KNSTRNQ9Y448 316 aa14.84□□□□□ -0.03
SNCA-210ENST00000506691 GPR162Q16538 588 aa14.83□□□□□ -0.04
SNCA-210ENST00000506691 IP6K1Q92551 441 aa14.83□□□□□ -0.04
SNCA-210ENST00000506691 CGNL1Q0VF96 1302 aa14.83□□□□□ -0.04
SNCA-210ENST00000506691 PNPLA7Q6ZV29 1317 aa14.83□□□□□ -0.04
SNCA-210ENST00000506691 SOX12O15370 315 aa14.82□□□□□ -0.04
SNCA-210ENST00000506691 GIGYF1O75420 1035 aaPredicted RBP14.82□□□□□ -0.04
SNCA-210ENST00000506691 ACSBG1Q96GR2 724 aa14.82□□□□□ -0.04
SNCA-210ENST00000506691 CARD14Q9BXL6 1004 aa14.81□□□□□ -0.04
SNCA-210ENST00000506691 PER1O15534 1290 aaPredicted RBP14.8□□□□□ -0.04
SNCA-210ENST00000506691 SHANK3Q9BYB0 1731 aa14.8□□□□□ -0.04
SNCA-210ENST00000506691 RTL1A6NKG5 1358 aa14.79□□□□□ -0.04
SNCA-210ENST00000506691 FYB1O15117 783 aa14.79□□□□□ -0.04
SNCA-210ENST00000506691 NSD2O96028 1365 aa14.79□□□□□ -0.04
SNCA-210ENST00000506691 NME9Q86XW9 330 aa14.79□□□□□ -0.04
SNCA-210ENST00000506691 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.79□□□□□ -0.04
SNCA-210ENST00000506691 TUBGCP6Q96RT7 1819 aa14.79□□□□□ -0.04
SNCA-210ENST00000506691 TFCP2L1Q9NZI6 479 aa14.79□□□□□ -0.04
SNCA-210ENST00000506691 NSD3Q9BZ95 1437 aa14.78□□□□□ -0.04
SNCA-210ENST00000506691 NPC1L1Q9UHC9 1359 aa14.78□□□□□ -0.04
SNCA-210ENST00000506691 FLAD1Q8NFF5 587 aa14.78□□□□□ -0.04
SNCA-210ENST00000506691 COG3Q96JB2 828 aa14.78□□□□□ -0.04
SNCA-210ENST00000506691 KAT6BQ8WYB5 2073 aa14.78□□□□□ -0.04
SNCA-210ENST00000506691 DOT1LQ8TEK3 1739 aa14.78□□□□□ -0.04
SNCA-210ENST00000506691 IFFO2Q5TF58 517 aa14.77□□□□□ -0.05
SNCA-210ENST00000506691 CD2APQ9Y5K6 639 aa14.77□□□□□ -0.05
SNCA-210ENST00000506691 KIF24Q5T7B8 1368 aa14.75□□□□□ -0.05
SNCA-210ENST00000506691 DDX10Q13206 875 aaKnown RBP14.75□□□□□ -0.05
SNCA-210ENST00000506691 AMER1Q5JTC6 1135 aaPredicted RBP14.74□□□□□ -0.05
SNCA-210ENST00000506691 ZCRB1Q8TBF4 217 aaKnown RBP14.74□□□□□ -0.05
SNCA-210ENST00000506691 DDX54Q8TDD1 881 aaKnown RBP14.74□□□□□ -0.05
SNCA-210ENST00000506691 GOLGB1Q14789 3259 aaKnown RBP14.74□□□□□ -0.05
SNCA-210ENST00000506691 PRIM1P49642 420 aaKnown RBP14.73□□□□□ -0.05
SNCA-210ENST00000506691 GGNBP2Q9H3C7 697 aa14.73□□□□□ -0.05
SNCA-210ENST00000506691 CCNL1Q9UK58 526 aaPredicted RBP14.73□□□□□ -0.05
SNCA-210ENST00000506691 C5P01031 1676 aa14.72□□□□□ -0.05
SNCA-210ENST00000506691 HOXC9P31274 260 aa14.72□□□□□ -0.05
SNCA-210ENST00000506691 ADCY9O60503 1353 aa14.72□□□□□ -0.05
SNCA-210ENST00000506691 MEGF6O75095 1541 aa14.71□□□□□ -0.05
SNCA-210ENST00000506691 MAP3K19Q56UN5 1328 aa14.71□□□□□ -0.05
SNCA-210ENST00000506691 MORC1Q86VD1 984 aa14.71□□□□□ -0.05
SNCA-210ENST00000506691 NLGN2Q8NFZ4 835 aa14.71□□□□□ -0.05
SNCA-210ENST00000506691 SMG6Q86US8 1419 aaKnown RBP14.71□□□□□ -0.05
SNCA-210ENST00000506691 PLEKHG2Q9H7P9 1386 aa14.7□□□□□ -0.06
SNCA-210ENST00000506691 TAF1LQ8IZX4 1826 aa14.69□□□□□ -0.06
SNCA-210ENST00000506691 KIF20BQ96Q89 1820 aa14.69□□□□□ -0.06
SNCA-210ENST00000506691 YBX3P16989 372 aaKnown RBP eCLIP14.69□□□□□ -0.06
SNCA-210ENST00000506691 AMPHP49418 695 aa14.69□□□□□ -0.06
SNCA-210ENST00000506691 COL23A1Q86Y22 540 aaPredicted RBP14.69□□□□□ -0.06
SNCA-210ENST00000506691 SYTL4Q96C24 671 aaPredicted RBP14.69□□□□□ -0.06
SNCA-210ENST00000506691 PCDH11XQ9BZA7 1347 aa14.68□□□□□ -0.06
SNCA-210ENST00000506691 PCDH11YQ9BZA8 1340 aa14.68□□□□□ -0.06
SNCA-210ENST00000506691 ATP10DQ9P241 1426 aa14.68□□□□□ -0.06
SNCA-210ENST00000506691 RALBP1Q15311 655 aa14.67□□□□□ -0.06
SNCA-210ENST00000506691 KLHL34Q8N239 644 aa14.67□□□□□ -0.06
SNCA-210ENST00000506691 RAPGEF4Q8WZA2 1011 aa14.67□□□□□ -0.06
SNCA-210ENST00000506691 SMARCC1Q92922 1105 aaPredicted RBP14.67□□□□□ -0.06
SNCA-210ENST00000506691 INSRP06213 1382 aa14.67□□□□□ -0.06
SNCA-210ENST00000506691 RGPD2P0DJD1 1756 aa14.66□□□□□ -0.06
SNCA-210ENST00000506691 PELP1Q8IZL8 1130 aaKnown RBP14.66□□□□□ -0.06
SNCA-210ENST00000506691 GPBP1L1Q9HC44 474 aaPredicted RBP14.66□□□□□ -0.06
SNCA-210ENST00000506691 CEP350Q5VT06 3117 aa14.66□□□□□ -0.06
SNCA-210ENST00000506691 CICQ96RK0 1608 aaPredicted RBP14.66□□□□□ -0.06
SNCA-210ENST00000506691 NCAPD2Q15021 1401 aa14.66□□□□□ -0.06
SNCA-210ENST00000506691 HSPA6P17066 643 aa14.65□□□□□ -0.06
SNCA-210ENST00000506691 CC2D1BQ5T0F9 858 aaKnown RBP14.65□□□□□ -0.06
SNCA-210ENST00000506691 ANKRD26Q9UPS8 1709 aa14.65□□□□□ -0.06
SNCA-210ENST00000506691 C4BP0C0L5 1744 aa14.64□□□□□ -0.07
SNCA-210ENST00000506691 PKD1L3Q7Z443 1732 aa14.64□□□□□ -0.07
SNCA-210ENST00000506691 FLT4P35916 1363 aa14.64□□□□□ -0.07
SNCA-210ENST00000506691 PALLDQ8WX93 1383 aa14.64□□□□□ -0.07
SNCA-210ENST00000506691 TATP17735 454 aaPredicted RBP14.64□□□□□ -0.07
SNCA-210ENST00000506691 NBPF6Q5VWK0 638 aa14.64□□□□□ -0.07
SNCA-210ENST00000506691 LTV1Q96GA3 475 aaPredicted RBP14.64□□□□□ -0.07
SNCA-210ENST00000506691 NBPF4Q96M43 638 aa14.64□□□□□ -0.07
SNCA-210ENST00000506691 UBR3Q6ZT12 1888 aa14.63□□□□□ -0.07
SNCA-210ENST00000506691 SSFA2P28290 1259 aa14.63□□□□□ -0.07
SNCA-210ENST00000506691 NKX1-1Q15270 411 aaPredicted RBP14.63□□□□□ -0.07
SNCA-210ENST00000506691 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.62□□□□□ -0.07
SNCA-210ENST00000506691 TOGARAM1Q9Y4F4 1720 aa14.61□□□□□ -0.07
SNCA-210ENST00000506691 MSH5O43196 834 aa14.61□□□□□ -0.07
SNCA-210ENST00000506691 KCNQ4P56696 695 aa14.61□□□□□ -0.07
SNCA-210ENST00000506691 POLKQ9UBT6 870 aa14.61□□□□□ -0.07
SNCA-210ENST00000506691 ITGB4P16144 1822 aa14.61□□□□□ -0.07
SNCA-210ENST00000506691 ZNF831Q5JPB2 1677 aa14.61□□□□□ -0.07
SNCA-210ENST00000506691 MAP2P11137 1827 aaKnown RBP14.6□□□□□ -0.07
SNCA-210ENST00000506691 ANP32CO43423 234 aa14.6□□□□□ -0.07
SNCA-210ENST00000506691 KIF13BQ9NQT8 1826 aa14.59□□□□□ -0.07
SNCA-210ENST00000506691 TNNT2P45379 298 aaPredicted RBP14.59□□□□□ -0.07
SNCA-210ENST00000506691 RRS1Q15050 365 aaKnown RBP14.59□□□□□ -0.07
SNCA-210ENST00000506691 AK7Q96M32 723 aa14.59□□□□□ -0.07
SNCA-210ENST00000506691 PRKRIP1Q9H875 184 aaPredicted RBP14.58□□□□□ -0.08
SNCA-210ENST00000506691 IGSF1Q8N6C5 1336 aa14.58□□□□□ -0.08
SNCA-210ENST00000506691 CYP27B1O15528 508 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms