RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 DPYDQ12882 1025 aa10.75□□□□□ -0.69
HERC4-213ENST00000506515 ZNF598Q86UK7 904 aaKnown RBP10.75□□□□□ -0.69
HERC4-213ENST00000506515 ANKMY2Q8IV38 441 aa10.75□□□□□ -0.69
HERC4-213ENST00000506515 MPNDQ8N594 471 aa10.75□□□□□ -0.69
HERC4-213ENST00000506515 KCTD17Q8N5Z5 321 aa10.75□□□□□ -0.69
HERC4-213ENST00000506515 ESF1Q9H501 851 aaKnown RBP10.75□□□□□ -0.69
HERC4-213ENST00000506515 TMPRSS4Q9NRS4 437 aa10.75□□□□□ -0.69
HERC4-213ENST00000506515 KIAA1024Q9UPX6 916 aa10.75□□□□□ -0.69
HERC4-213ENST00000506515 ZBTB7BO15156 539 aaPredicted RBP10.74□□□□□ -0.69
HERC4-213ENST00000506515 LARGE2Q8N3Y3 721 aa10.74□□□□□ -0.69
HERC4-213ENST00000506515 ALDH1A1P00352 501 aa10.73□□□□□ -0.69
HERC4-213ENST00000506515 DHX9Q08211 1270 aaKnown RBP10.73□□□□□ -0.69
HERC4-213ENST00000506515 CYLDQ9NQC7 956 aa10.73□□□□□ -0.69
HERC4-213ENST00000506515 PCDHGA11Q9Y5H2 935 aa10.73□□□□□ -0.69
HERC4-213ENST00000506515 NR5A1Q13285 461 aa10.72□□□□□ -0.69
HERC4-213ENST00000506515 CCDC116Q8IYX3 515 aa10.72□□□□□ -0.69
HERC4-213ENST00000506515 RBM19Q9Y4C8 960 aaKnown RBP10.72□□□□□ -0.69
HERC4-213ENST00000506515 NR3C2P08235 984 aa10.71□□□□□ -0.69
HERC4-213ENST00000506515 PPP1R26Q5T8A7 1209 aaPredicted RBP10.71□□□□□ -0.69
HERC4-213ENST00000506515 CCDC102BQ68D86 513 aa10.71□□□□□ -0.69
HERC4-213ENST00000506515 CC2D2BQ6DHV5 1058 aa10.71□□□□□ -0.69
HERC4-213ENST00000506515 ZNF784Q8NCA9 323 aaPredicted RBP10.71□□□□□ -0.69
HERC4-213ENST00000506515 TPCN2Q8NHX9 752 aa10.71□□□□□ -0.69
HERC4-213ENST00000506515 PODXL2Q9NZ53 605 aa10.71□□□□□ -0.69
HERC4-213ENST00000506515 PKD2L1Q9P0L9 805 aa10.71□□□□□ -0.69
HERC4-213ENST00000506515 ERVK-9P63128 1117 aa10.7□□□□□ -0.7
HERC4-213ENST00000506515 SIX5Q8N196 739 aa10.7□□□□□ -0.7
HERC4-213ENST00000506515 V9GY48 417 aaPredicted RBP10.7□□□□□ -0.7
HERC4-213ENST00000506515 SFI1A8K8P3 1242 aa10.69□□□□□ -0.7
HERC4-213ENST00000506515 DKK1O94907 266 aa10.69□□□□□ -0.7
HERC4-213ENST00000506515 BRD1O95696 1058 aa10.69□□□□□ -0.7
HERC4-213ENST00000506515 WASF2Q9Y6W5 498 aa10.69□□□□□ -0.7
HERC4-213ENST00000506515 SEC13P55735 322 aa10.68□□□□□ -0.7
HERC4-213ENST00000506515 MYT1Q01538 1121 aa10.67□□□□□ -0.7
HERC4-213ENST00000506515 FAM69CQ0P6D2 419 aa10.67□□□□□ -0.7
HERC4-213ENST00000506515 NNTQ13423 1086 aa10.67□□□□□ -0.7
HERC4-213ENST00000506515 SNIP1Q8TAD8 396 aaKnown RBP10.67□□□□□ -0.7
HERC4-213ENST00000506515 TRIM52Q96A61 297 aa10.67□□□□□ -0.7
HERC4-213ENST00000506515 OSBPL3Q9H4L5 887 aa10.67□□□□□ -0.7
HERC4-213ENST00000506515 TTC24A2A3L6 582 aaPredicted RBP10.66□□□□□ -0.7
HERC4-213ENST00000506515 TNFRSF10AO00220 468 aa10.66□□□□□ -0.7
HERC4-213ENST00000506515 PGPEP1Q9NXJ5 209 aa10.66□□□□□ -0.7
HERC4-213ENST00000506515 LILRA1O75019 489 aa10.65□□□□□ -0.7
HERC4-213ENST00000506515 STAU1O95793 577 aaKnown RBP10.65□□□□□ -0.7
HERC4-213ENST00000506515 CYP4X1Q8N118 509 aa10.65□□□□□ -0.7
HERC4-213ENST00000506515 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.65□□□□□ -0.7
HERC4-213ENST00000506515 EMILIN1Q9Y6C2 1016 aa10.65□□□□□ -0.7
HERC4-213ENST00000506515 J3QL48 77 aa10.64□□□□□ -0.71
HERC4-213ENST00000506515 GDF9O60383 454 aa10.64□□□□□ -0.71
HERC4-213ENST00000506515 LGR5O75473 907 aa10.64□□□□□ -0.71
HERC4-213ENST00000506515 HINFPQ9BQA5 517 aa10.64□□□□□ -0.71
HERC4-213ENST00000506515 SLAIN2Q9P270 581 aa10.64□□□□□ -0.71
HERC4-213ENST00000506515 ADD1P35611 737 aaKnown RBP10.63□□□□□ -0.71
HERC4-213ENST00000506515 KCNA1Q09470 495 aa10.63□□□□□ -0.71
HERC4-213ENST00000506515 SWI5Q1ZZU3 235 aa10.63□□□□□ -0.71
HERC4-213ENST00000506515 CLP1Q92989 425 aaKnown RBP10.63□□□□□ -0.71
HERC4-213ENST00000506515 B4GALNT3Q6L9W6 998 aa10.62□□□□□ -0.71
HERC4-213ENST00000506515 PRMT3O60678 531 aa10.61□□□□□ -0.71
HERC4-213ENST00000506515 GDF10P55107 478 aa10.61□□□□□ -0.71
HERC4-213ENST00000506515 CYP2U1Q7Z449 544 aa10.61□□□□□ -0.71
HERC4-213ENST00000506515 TSEN2Q8NCE0 465 aaKnown RBP10.61□□□□□ -0.71
HERC4-213ENST00000506515 ZNF358Q9NW07 568 aa10.61□□□□□ -0.71
HERC4-213ENST00000506515 TMEM229AB2RXF0 380 aa10.6□□□□□ -0.71
HERC4-213ENST00000506515 PATL2C9JE40 543 aaKnown RBP10.6□□□□□ -0.71
HERC4-213ENST00000506515 ATP2B4P23634 1241 aa10.6□□□□□ -0.71
HERC4-213ENST00000506515 SCNN1DP51172 638 aa10.6□□□□□ -0.71
HERC4-213ENST00000506515 PRIMPOLQ96LW4 560 aa10.6□□□□□ -0.71
HERC4-213ENST00000506515 ZIC2O95409 532 aaPredicted RBP10.59□□□□□ -0.71
HERC4-213ENST00000506515 SSFA2P28290 1259 aa10.59□□□□□ -0.71
HERC4-213ENST00000506515 CBLBQ13191 982 aa10.59□□□□□ -0.71
HERC4-213ENST00000506515 PHLDB3Q6NSJ2 640 aa10.59□□□□□ -0.71
HERC4-213ENST00000506515 ITPKCQ96DU7 683 aa10.59□□□□□ -0.71
HERC4-213ENST00000506515 GZF1Q9H116 711 aaPredicted RBP10.59□□□□□ -0.71
HERC4-213ENST00000506515 ETNK1Q9HBU6 452 aa10.59□□□□□ -0.71
HERC4-213ENST00000506515 RAB6BQ9NRW1 208 aa10.59□□□□□ -0.71
HERC4-213ENST00000506515 TOR4AQ9NXH8 423 aa10.59□□□□□ -0.71
HERC4-213ENST00000506515 SERTAD1Q9UHV2 236 aa10.59□□□□□ -0.71
HERC4-213ENST00000506515 GNRH1P01148 92 aa10.58□□□□□ -0.72
HERC4-213ENST00000506515 WDR4P57081 412 aaKnown RBP10.58□□□□□ -0.72
HERC4-213ENST00000506515 TRIM67Q6ZTA4 783 aa10.58□□□□□ -0.72
HERC4-213ENST00000506515 IVNS1ABPQ9Y6Y0 642 aa10.58□□□□□ -0.72
HERC4-213ENST00000506515 M0R2N6 131 aa10.57□□□□□ -0.72
HERC4-213ENST00000506515 INHAP05111 366 aa10.57□□□□□ -0.72
HERC4-213ENST00000506515 ZFAND3Q9H8U3 227 aa10.57□□□□□ -0.72
HERC4-213ENST00000506515 ARHGEF10LQ9HCE6 1279 aa10.57□□□□□ -0.72
HERC4-213ENST00000506515 BACH1O14867 736 aa10.56□□□□□ -0.72
HERC4-213ENST00000506515 ADH1AP07327 375 aa10.56□□□□□ -0.72
HERC4-213ENST00000506515 SMPD1P17405 629 aa10.56□□□□□ -0.72
HERC4-213ENST00000506515 KLF16Q9BXK1 252 aaPredicted RBP10.56□□□□□ -0.72
HERC4-213ENST00000506515 SCNN1AP37088 669 aa10.55□□□□□ -0.72
HERC4-213ENST00000506515 PRR20EP86478 221 aa10.55□□□□□ -0.72
HERC4-213ENST00000506515 PRR20CP86479 221 aa10.55□□□□□ -0.72
HERC4-213ENST00000506515 PRR20DP86480 221 aa10.55□□□□□ -0.72
HERC4-213ENST00000506515 PRR20BP86481 221 aa10.55□□□□□ -0.72
HERC4-213ENST00000506515 PRR20AP86496 221 aa10.55□□□□□ -0.72
HERC4-213ENST00000506515 ESCO1Q5FWF5 840 aa10.55□□□□□ -0.72
HERC4-213ENST00000506515 TNS4Q8IZW8 715 aa10.55□□□□□ -0.72
HERC4-213ENST00000506515 WASLO00401 505 aaPredicted RBP10.54□□□□□ -0.72
HERC4-213ENST00000506515 TIMP2P16035 220 aa10.54□□□□□ -0.72
HERC4-213ENST00000506515 OCLNQ16625 522 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms