RNA–Protein interactions for RNA: ENST00000506491.5

KLHL3-207, Transcript of kelch like family member 3, humanhuman

TSL 1 (best) BASIC

Gene KLHL3, Length 6,566 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-207ENST00000506491 MPNDQ8N594 471 aa13.1□□□□□ -0.31
KLHL3-207ENST00000506491 ZNF397Q8NF99 534 aaPredicted RBP13.1□□□□□ -0.31
KLHL3-207ENST00000506491 HMGN5P82970 282 aaKnown RBP13.1□□□□□ -0.31
KLHL3-207ENST00000506491 TSR2Q969E8 191 aaKnown RBP13.1□□□□□ -0.31
KLHL3-207ENST00000506491 MYOM3Q5VTT5 1437 aa13.1□□□□□ -0.31
KLHL3-207ENST00000506491 IDH1O75874 414 aaKnown RBP13.1□□□□□ -0.31
KLHL3-207ENST00000506491 CETN2P41208 172 aa13.1□□□□□ -0.31
KLHL3-207ENST00000506491 BLOC1S2Q6QNY1 142 aa13.1□□□□□ -0.31
KLHL3-207ENST00000506491 RRBP1Q9P2E9 1410 aaKnown RBP13.09□□□□□ -0.31
KLHL3-207ENST00000506491 POLR3DP05423 398 aaPredicted RBP13.09□□□□□ -0.31
KLHL3-207ENST00000506491 CWC27Q6UX04 472 aaKnown RBP13.09□□□□□ -0.31
KLHL3-207ENST00000506491 CEP126Q9P2H0 1117 aa13.09□□□□□ -0.31
KLHL3-207ENST00000506491 FYCO1Q9BQS8 1478 aa13.09□□□□□ -0.31
KLHL3-207ENST00000506491 ARHGAP5Q13017 1502 aa13.09□□□□□ -0.31
KLHL3-207ENST00000506491 AIDAQ96BJ3 306 aa13.09□□□□□ -0.31
KLHL3-207ENST00000506491 EPB41L2O43491 1005 aaKnown RBP13.09□□□□□ -0.31
KLHL3-207ENST00000506491 STAC3Q96MF2 364 aa13.09□□□□□ -0.31
KLHL3-207ENST00000506491 JAKMIP1Q96N16 626 aaKnown RBP13.09□□□□□ -0.31
KLHL3-207ENST00000506491 INCENPQ9NQS7 918 aa13.09□□□□□ -0.31
KLHL3-207ENST00000506491 CEP131Q9UPN4 1083 aa13.09□□□□□ -0.31
KLHL3-207ENST00000506491 CDK19Q9BWU1 502 aa13.09□□□□□ -0.31
KLHL3-207ENST00000506491 ABCF2Q9UG63 623 aa13.09□□□□□ -0.31
KLHL3-207ENST00000506491 CCDC7Q96M83 1385 aa13.09□□□□□ -0.31
KLHL3-207ENST00000506491 PODXL2Q9NZ53 605 aa13.09□□□□□ -0.31
KLHL3-207ENST00000506491 WDR78Q5VTH9 848 aa13.08□□□□□ -0.32
KLHL3-207ENST00000506491 CCDC102AQ96A19 550 aa13.08□□□□□ -0.32
KLHL3-207ENST00000506491 CFAP45Q9UL16 551 aa13.08□□□□□ -0.32
KLHL3-207ENST00000506491 BCAR3O75815 825 aa13.08□□□□□ -0.32
KLHL3-207ENST00000506491 CCDC148Q8NFR7 591 aa13.08□□□□□ -0.32
KLHL3-207ENST00000506491 PRDM11Q9NQV5 511 aa13.08□□□□□ -0.32
KLHL3-207ENST00000506491 IMMTQ16891 758 aaKnown RBP13.07□□□□□ -0.32
KLHL3-207ENST00000506491 UBA5Q9GZZ9 404 aa13.07□□□□□ -0.32
KLHL3-207ENST00000506491 CCDC113Q9H0I3 377 aa13.07□□□□□ -0.32
KLHL3-207ENST00000506491 SMTNL1A8MU46 457 aa13.07□□□□□ -0.32
KLHL3-207ENST00000506491 UPF3BQ9BZI7 483 aaKnown RBP13.07□□□□□ -0.32
KLHL3-207ENST00000506491 ZNF287Q9HBT7 754 aa13.07□□□□□ -0.32
KLHL3-207ENST00000506491 SRGAP3O43295 1099 aa13.07□□□□□ -0.32
KLHL3-207ENST00000506491 DYDC1Q8WWB3 177 aa13.07□□□□□ -0.32
KLHL3-207ENST00000506491 SLC26A8Q96RN1 970 aa13.07□□□□□ -0.32
KLHL3-207ENST00000506491 MAP2K1Q02750 393 aaPredicted RBP13.06□□□□□ -0.32
KLHL3-207ENST00000506491 PPP2R1AP30153 589 aa13.06□□□□□ -0.32
KLHL3-207ENST00000506491 CFAP70Q5T0N1 1121 aa13.06□□□□□ -0.32
KLHL3-207ENST00000506491 CCDC150Q8NCX0 1101 aa13.06□□□□□ -0.32
KLHL3-207ENST00000506491 TSG101Q99816 390 aa13.06□□□□□ -0.32
KLHL3-207ENST00000506491 STAMBPO95630 424 aa13.06□□□□□ -0.32
KLHL3-207ENST00000506491 METTL24Q5JXM2 366 aa13.06□□□□□ -0.32
KLHL3-207ENST00000506491 MKNK2Q9HBH9 465 aa13.06□□□□□ -0.32
KLHL3-207ENST00000506491 K7ELQ4 463 aaPredicted RBP13.06□□□□□ -0.32
KLHL3-207ENST00000506491 ZPR1O75312 459 aa13.06□□□□□ -0.32
KLHL3-207ENST00000506491 WIZO95785 1651 aa13.06□□□□□ -0.32
KLHL3-207ENST00000506491 GOLGA6L10A0A0M3HER8 536 aa13.06□□□□□ -0.32
KLHL3-207ENST00000506491 THEMISQ8N1K5 641 aaPredicted RBP13.05□□□□□ -0.32
KLHL3-207ENST00000506491 ANKIB1Q9P2G1 1089 aa13.05□□□□□ -0.32
KLHL3-207ENST00000506491 CDCA7LQ96GN5 454 aa13.05□□□□□ -0.32
KLHL3-207ENST00000506491 NUP62CLQ9H1M0 184 aa13.05□□□□□ -0.32
KLHL3-207ENST00000506491 LIG1P18858 919 aa13.05□□□□□ -0.32
KLHL3-207ENST00000506491 CAVIN4Q5BKX8 364 aa13.05□□□□□ -0.32
KLHL3-207ENST00000506491 DRC1Q96MC2 740 aa13.05□□□□□ -0.32
KLHL3-207ENST00000506491 TOP2AP11388 1531 aaKnown RBP13.05□□□□□ -0.32
KLHL3-207ENST00000506491 MINDY4BA8MYZ0 360 aa13.05□□□□□ -0.32
KLHL3-207ENST00000506491 STARD3NLO95772 234 aa13.05□□□□□ -0.32
KLHL3-207ENST00000506491 XPCQ01831 940 aaPredicted RBP13.05□□□□□ -0.32
KLHL3-207ENST00000506491 BRD4O60885 1362 aaPredicted RBP13.05□□□□□ -0.32
KLHL3-207ENST00000506491 ZNF644Q9H582 1327 aaPredicted RBP13.05□□□□□ -0.32
KLHL3-207ENST00000506491 CTNNBL1Q8WYA6 563 aaPredicted RBP13.05□□□□□ -0.32
KLHL3-207ENST00000506491 DDX11Q96FC9 970 aa13.05□□□□□ -0.32
KLHL3-207ENST00000506491 GOPCQ9HD26 462 aa13.05□□□□□ -0.32
KLHL3-207ENST00000506491 COMMD10Q9Y6G5 202 aa13.05□□□□□ -0.32
KLHL3-207ENST00000506491 MAPK8IP2Q13387 824 aaPredicted RBP13.04□□□□□ -0.32
KLHL3-207ENST00000506491 SPA17Q15506 151 aa13.04□□□□□ -0.32
KLHL3-207ENST00000506491 CCDC96Q2M329 555 aa13.04□□□□□ -0.32
KLHL3-207ENST00000506491 CUL5Q93034 780 aa13.04□□□□□ -0.32
KLHL3-207ENST00000506491 ZSCAN31Q96LW9 406 aaPredicted RBP13.04□□□□□ -0.32
KLHL3-207ENST00000506491 ZNF692Q9BU19 519 aaPredicted RBP13.04□□□□□ -0.32
KLHL3-207ENST00000506491 ZNF652Q9Y2D9 606 aa13.04□□□□□ -0.32
KLHL3-207ENST00000506491 KRT32Q14532 448 aa13.04□□□□□ -0.32
KLHL3-207ENST00000506491 ARHGAP29Q52LW3 1261 aa13.04□□□□□ -0.32
KLHL3-207ENST00000506491 PSMD1Q99460 953 aa13.04□□□□□ -0.32
KLHL3-207ENST00000506491 FANCD2Q9BXW9 1451 aa13.04□□□□□ -0.32
KLHL3-207ENST00000506491 CCDC178Q5BJE1 867 aa13.04□□□□□ -0.32
KLHL3-207ENST00000506491 CABP1Q9NZU7 370 aa13.04□□□□□ -0.32
KLHL3-207ENST00000506491 IL1RAPL2Q9NP60 686 aa13.04□□□□□ -0.32
KLHL3-207ENST00000506491 CFAP100Q494V2 611 aa13.03□□□□□ -0.32
KLHL3-207ENST00000506491 FERMT2Q96AC1 680 aa13.03□□□□□ -0.32
KLHL3-207ENST00000506491 FKBP15Q5T1M5 1219 aa13.03□□□□□ -0.32
KLHL3-207ENST00000506491 NF2P35240 595 aa13.03□□□□□ -0.32
KLHL3-207ENST00000506491 FILIP1Q7Z7B0 1213 aa13.03□□□□□ -0.32
KLHL3-207ENST00000506491 DZIP1Q86YF9 867 aaKnown RBP13.03□□□□□ -0.32
KLHL3-207ENST00000506491 CUX1P39880 1505 aa13.03□□□□□ -0.32
KLHL3-207ENST00000506491 CACNA2D4Q7Z3S7 1137 aa13.03□□□□□ -0.32
KLHL3-207ENST00000506491 PPP6R1Q9UPN7 881 aa13.03□□□□□ -0.32
KLHL3-207ENST00000506491 AKNAQ7Z591 1439 aa13.03□□□□□ -0.32
KLHL3-207ENST00000506491 CASTP20810 708 aaKnown RBP13.02□□□□□ -0.32
KLHL3-207ENST00000506491 GRIPAP1Q4V328 841 aa13.02□□□□□ -0.32
KLHL3-207ENST00000506491 GSTTP1A0A1W2PQM5 241 aa13.02□□□□□ -0.32
KLHL3-207ENST00000506491 ZNF219Q9P2Y4 722 aaPredicted RBP13.02□□□□□ -0.33
KLHL3-207ENST00000506491 LARP1Q6PKG0 1096 aaKnown RBP13.02□□□□□ -0.33
KLHL3-207ENST00000506491 NUTM1Q86Y26 1132 aa13.02□□□□□ -0.33
KLHL3-207ENST00000506491 HMGB2P26583 209 aaKnown RBP13.02□□□□□ -0.33
KLHL3-207ENST00000506491 SCAPERQ9BY12 1400 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms