RNA–Protein interactions for RNA: ENST00000506441.1

RETREG1-203, Transcript of reticulophagy regulator 1, humanhuman

TSL 2

Gene RETREG1, Length 585 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-203ENST00000506441 ELOAQ14241 798 aaKnown RBP13.56□□□□□ -0.24
RETREG1-203ENST00000506441 OGFOD1Q8N543 542 aa13.56□□□□□ -0.24
RETREG1-203ENST00000506441 CDCA7Q9BWT1 371 aaPredicted RBP13.56□□□□□ -0.24
RETREG1-203ENST00000506441 ERVK-9P63128 1117 aa13.54□□□□□ -0.24
RETREG1-203ENST00000506441 TOR4AQ9NXH8 423 aa13.54□□□□□ -0.24
RETREG1-203ENST00000506441 USTQ9Y2C2 406 aa13.54□□□□□ -0.24
RETREG1-203ENST00000506441 CYP2U1Q7Z449 544 aa13.53□□□□□ -0.24
RETREG1-203ENST00000506441 FAM200AQ8TCP9 573 aa13.53□□□□□ -0.24
RETREG1-203ENST00000506441 USP17L15C9J2P7 530 aa13.52□□□□□ -0.25
RETREG1-203ENST00000506441 USP17L10C9JJH3 530 aa13.52□□□□□ -0.25
RETREG1-203ENST00000506441 USP17L13C9JLJ4 530 aa13.52□□□□□ -0.25
RETREG1-203ENST00000506441 USP17L12C9JPN9 530 aa13.52□□□□□ -0.25
RETREG1-203ENST00000506441 USP17L11C9JVI0 530 aa13.52□□□□□ -0.25
RETREG1-203ENST00000506441 USP17L21D6R901 530 aa13.52□□□□□ -0.25
RETREG1-203ENST00000506441 USP17L18D6R9N7 530 aa13.52□□□□□ -0.25
RETREG1-203ENST00000506441 USP17L22D6RA61 530 aa13.52□□□□□ -0.25
RETREG1-203ENST00000506441 USP17L17D6RBQ6 530 aa13.52□□□□□ -0.25
RETREG1-203ENST00000506441 USP17L19D6RCP7 530 aa13.52□□□□□ -0.25
RETREG1-203ENST00000506441 USP17L20D6RJB6 530 aa13.52□□□□□ -0.25
RETREG1-203ENST00000506441 USP17L24Q0WX57 530 aa13.52□□□□□ -0.25
RETREG1-203ENST00000506441 CYLDQ9NQC7 956 aa13.52□□□□□ -0.25
RETREG1-203ENST00000506441 TMPRSS4Q9NRS4 437 aa13.52□□□□□ -0.25
RETREG1-203ENST00000506441 NOVA2Q9UNW9 492 aaKnown RBP13.51□□□□□ -0.25
RETREG1-203ENST00000506441 PDZRN3Q9UPQ7 1066 aa13.51□□□□□ -0.25
RETREG1-203ENST00000506441 ANKMY2Q8IV38 441 aa13.5□□□□□ -0.25
RETREG1-203ENST00000506441 RETREG2Q8NC44 543 aa13.5□□□□□ -0.25
RETREG1-203ENST00000506441 ZNF784Q8NCA9 323 aaPredicted RBP13.5□□□□□ -0.25
RETREG1-203ENST00000506441 J3QL48 77 aa13.49□□□□□ -0.25
RETREG1-203ENST00000506441 NR3C2P08235 984 aa13.49□□□□□ -0.25
RETREG1-203ENST00000506441 PTK7Q13308 1070 aa13.49□□□□□ -0.25
RETREG1-203ENST00000506441 CCDC102BQ68D86 513 aa13.49□□□□□ -0.25
RETREG1-203ENST00000506441 WDR4P57081 412 aaKnown RBP13.48□□□□□ -0.25
RETREG1-203ENST00000506441 ESCO1Q5FWF5 840 aa13.48□□□□□ -0.25
RETREG1-203ENST00000506441 ZNF594Q96JF6 807 aaPredicted RBP13.48□□□□□ -0.25
RETREG1-203ENST00000506441 SEC13P55735 322 aa13.47□□□□□ -0.25
RETREG1-203ENST00000506441 CRTC2Q53ET0 693 aaPredicted RBP13.47□□□□□ -0.25
RETREG1-203ENST00000506441 SIX5Q8N196 739 aa13.47□□□□□ -0.25
RETREG1-203ENST00000506441 PCDHGA11Q9Y5H2 935 aa13.47□□□□□ -0.25
RETREG1-203ENST00000506441 BACH1O14867 736 aa13.46□□□□□ -0.25
RETREG1-203ENST00000506441 ZIC2O95409 532 aaPredicted RBP13.46□□□□□ -0.25
RETREG1-203ENST00000506441 GNRH1P01148 92 aa13.46□□□□□ -0.25
RETREG1-203ENST00000506441 CLDN10P78369 228 aa13.46□□□□□ -0.25
RETREG1-203ENST00000506441 B4GALNT3Q6L9W6 998 aa13.46□□□□□ -0.25
RETREG1-203ENST00000506441 SMPD1P17405 629 aa13.45□□□□□ -0.26
RETREG1-203ENST00000506441 SCTRP47872 440 aa13.45□□□□□ -0.26
RETREG1-203ENST00000506441 DPYDQ12882 1025 aa13.45□□□□□ -0.26
RETREG1-203ENST00000506441 TPCN2Q8NHX9 752 aa13.45□□□□□ -0.26
RETREG1-203ENST00000506441 TRAIPQ9BWF2 469 aa13.45□□□□□ -0.26
RETREG1-203ENST00000506441 ZBTB7BO15156 539 aaPredicted RBP13.44□□□□□ -0.26
RETREG1-203ENST00000506441 OSBPL3Q9H4L5 887 aa13.44□□□□□ -0.26
RETREG1-203ENST00000506441 LILRA1O75019 489 aa13.43□□□□□ -0.26
RETREG1-203ENST00000506441 TRIM67Q6ZTA4 783 aa13.43□□□□□ -0.26
RETREG1-203ENST00000506441 UPP2O95045 317 aa13.42□□□□□ -0.26
RETREG1-203ENST00000506441 LAPTM4AQ15012 233 aa13.42□□□□□ -0.26
RETREG1-203ENST00000506441 ADH1AP07327 375 aa13.41□□□□□ -0.26
RETREG1-203ENST00000506441 SWI5Q1ZZU3 235 aa13.41□□□□□ -0.26
RETREG1-203ENST00000506441 ITPKCQ96DU7 683 aa13.41□□□□□ -0.26
RETREG1-203ENST00000506441 PATL2C9JE40 543 aaKnown RBP13.4□□□□□ -0.26
RETREG1-203ENST00000506441 M0R2N6 131 aa13.4□□□□□ -0.26
RETREG1-203ENST00000506441 KCTD17Q8N5Z5 321 aa13.4□□□□□ -0.26
RETREG1-203ENST00000506441 FAM187AA6NFU0 413 aa13.39□□□□□ -0.27
RETREG1-203ENST00000506441 GDF10P55107 478 aa13.39□□□□□ -0.27
RETREG1-203ENST00000506441 Q6ZVU0 165 aa13.39□□□□□ -0.27
RETREG1-203ENST00000506441 HINFPQ9BQA5 517 aa13.39□□□□□ -0.27
RETREG1-203ENST00000506441 WASLO00401 505 aaPredicted RBP13.38□□□□□ -0.27
RETREG1-203ENST00000506441 CAPN5O15484 640 aaPredicted RBP13.38□□□□□ -0.27
RETREG1-203ENST00000506441 TIMP2P16035 220 aa13.38□□□□□ -0.27
RETREG1-203ENST00000506441 ADD1P35611 737 aaKnown RBP13.38□□□□□ -0.27
RETREG1-203ENST00000506441 TMEM164Q5U3C3 297 aa13.38□□□□□ -0.27
RETREG1-203ENST00000506441 HPS1Q92902 700 aa13.38□□□□□ -0.27
RETREG1-203ENST00000506441 NLRP3Q96P20 1036 aa13.38□□□□□ -0.27
RETREG1-203ENST00000506441 KLF16Q9BXK1 252 aaPredicted RBP13.38□□□□□ -0.27
RETREG1-203ENST00000506441 GFRA3O60609 400 aa13.37□□□□□ -0.27
RETREG1-203ENST00000506441 DGAT1O75907 488 aa13.37□□□□□ -0.27
RETREG1-203ENST00000506441 GTF2E1P29083 439 aaPredicted RBP13.37□□□□□ -0.27
RETREG1-203ENST00000506441 PKDCCQ504Y2 493 aa13.37□□□□□ -0.27
RETREG1-203ENST00000506441 TSEN34Q9BSV6 310 aaKnown RBP13.37□□□□□ -0.27
RETREG1-203ENST00000506441 ZMIZ1Q9ULJ6 1067 aa13.37□□□□□ -0.27
RETREG1-203ENST00000506441 NRG2O14511 850 aaPredicted RBP13.36□□□□□ -0.27
RETREG1-203ENST00000506441 INHAP05111 366 aa13.36□□□□□ -0.27
RETREG1-203ENST00000506441 PTGIRP43119 386 aa13.36□□□□□ -0.27
RETREG1-203ENST00000506441 STK32AQ8WU08 396 aa13.36□□□□□ -0.27
RETREG1-203ENST00000506441 ZFAND3Q9H8U3 227 aa13.36□□□□□ -0.27
RETREG1-203ENST00000506441 KIAA1024Q9UPX6 916 aa13.36□□□□□ -0.27
RETREG1-203ENST00000506441 CBLBQ13191 982 aa13.35□□□□□ -0.27
RETREG1-203ENST00000506441 RB1CC1Q8TDY2 1594 aa13.34□□□□□ -0.27
RETREG1-203ENST00000506441 SFI1A8K8P3 1242 aa13.34□□□□□ -0.27
RETREG1-203ENST00000506441 CTC1Q2NKJ3 1217 aa13.34□□□□□ -0.27
RETREG1-203ENST00000506441 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.34□□□□□ -0.27
RETREG1-203ENST00000506441 BRD1O95696 1058 aa13.33□□□□□ -0.28
RETREG1-203ENST00000506441 CLP1Q92989 425 aaKnown RBP13.33□□□□□ -0.28
RETREG1-203ENST00000506441 NACADO15069 1562 aa13.32□□□□□ -0.28
RETREG1-203ENST00000506441 ZBTB7CA1YPR0 619 aa13.32□□□□□ -0.28
RETREG1-203ENST00000506441 TMEM88BA6NKF7 163 aa13.32□□□□□ -0.28
RETREG1-203ENST00000506441 RELBQ01201 579 aa13.32□□□□□ -0.28
RETREG1-203ENST00000506441 SCARF1Q14162 830 aa13.32□□□□□ -0.28
RETREG1-203ENST00000506441 XAGE2Q96GT9 111 aa13.32□□□□□ -0.28
RETREG1-203ENST00000506441 ESYT1Q9BSJ8 1104 aa13.32□□□□□ -0.28
RETREG1-203ENST00000506441 ARHGEF10LQ9HCE6 1279 aa13.32□□□□□ -0.28
RETREG1-203ENST00000506441 ZNF358Q9NW07 568 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms