RNA–Protein interactions for RNA: ENST00000506396.1

CDH6-203, Transcript of cadherin 6, humanhuman

TSL 2

Gene CDH6, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-203ENST00000506396 VAMP4O75379 141 aa22■■□□□ 1.11
CDH6-203ENST00000506396 THUMPD2Q9BTF0 503 aaKnown RBP22■■□□□ 1.11
CDH6-203ENST00000506396 OGFRQ9NZT2 677 aa22■■□□□ 1.11
CDH6-203ENST00000506396 FANCAO15360 1455 aa22■■□□□ 1.11
CDH6-203ENST00000506396 PIK3R4Q99570 1358 aa22■■□□□ 1.11
CDH6-203ENST00000506396 ARHGAP45Q92619 1136 aa22■■□□□ 1.11
CDH6-203ENST00000506396 ZDHHC9Q9Y397 364 aa22■■□□□ 1.11
CDH6-203ENST00000506396 PTCH1Q13635 1447 aa22■■□□□ 1.11
CDH6-203ENST00000506396 SRPK2P78362 688 aaKnown RBP21.99■■□□□ 1.11
CDH6-203ENST00000506396 CHAF1AQ13111 956 aaPredicted RBP21.99■■□□□ 1.11
CDH6-203ENST00000506396 TTC22Q5TAA0 569 aa21.99■■□□□ 1.11
CDH6-203ENST00000506396 SPTLC3Q9NUV7 552 aa21.99■■□□□ 1.11
CDH6-203ENST00000506396 REREQ9P2R6 1566 aa21.99■■□□□ 1.11
CDH6-203ENST00000506396 PPLO60437 1756 aa21.99■■□□□ 1.11
CDH6-203ENST00000506396 ST18O60284 1047 aa21.99■■□□□ 1.11
CDH6-203ENST00000506396 MBD3O95983 291 aa21.99■■□□□ 1.11
CDH6-203ENST00000506396 DIAPH3Q9NSV4 1193 aa21.99■■□□□ 1.11
CDH6-203ENST00000506396 USP25Q9UHP3 1055 aa21.99■■□□□ 1.11
CDH6-203ENST00000506396 PRKAR2BP31323 418 aa21.98■■□□□ 1.11
CDH6-203ENST00000506396 INTS3Q68E01 1043 aaKnown RBP21.98■■□□□ 1.11
CDH6-203ENST00000506396 GLI2P10070 1586 aa21.98■■□□□ 1.11
CDH6-203ENST00000506396 ABCC4O15439 1325 aa21.98■■□□□ 1.11
CDH6-203ENST00000506396 FYB1O15117 783 aa21.98■■□□□ 1.11
CDH6-203ENST00000506396 C16orf71Q8IYS4 520 aaPredicted RBP21.98■■□□□ 1.11
CDH6-203ENST00000506396 CFAP44Q96MT7 982 aa21.98■■□□□ 1.11
CDH6-203ENST00000506396 CHD1O14646 1710 aa21.97■■□□□ 1.11
CDH6-203ENST00000506396 CFAP65Q6ZU64 1925 aaKnown RBP21.97■■□□□ 1.11
CDH6-203ENST00000506396 ATAD2Q6PL18 1390 aa21.96■■□□□ 1.11
CDH6-203ENST00000506396 GABPB1Q06547 395 aaPredicted RBP21.96■■□□□ 1.11
CDH6-203ENST00000506396 SENP3Q9H4L4 574 aaPredicted RBP21.95■■□□□ 1.1
CDH6-203ENST00000506396 ARAP3Q8WWN8 1544 aa21.95■■□□□ 1.1
CDH6-203ENST00000506396 FCHSD2O94868 740 aa21.95■■□□□ 1.1
CDH6-203ENST00000506396 LRRC7Q96NW7 1537 aa21.94■■□□□ 1.1
CDH6-203ENST00000506396 ADCY5O95622 1261 aa21.94■■□□□ 1.1
CDH6-203ENST00000506396 OTUD7AQ8TE49 926 aaPredicted RBP21.94■■□□□ 1.1
CDH6-203ENST00000506396 ARHGEF28Q8N1W1 1705 aaKnown RBP21.93■■□□□ 1.1
CDH6-203ENST00000506396 SLFN14P0C7P3 912 aa21.93■■□□□ 1.1
CDH6-203ENST00000506396 CHMP4AQ9BY43 222 aa21.93■■□□□ 1.1
CDH6-203ENST00000506396 CCDC66A2RUB6 948 aa21.93■■□□□ 1.1
CDH6-203ENST00000506396 DCTPP1Q9H773 170 aa21.93■■□□□ 1.1
CDH6-203ENST00000506396 CASC1Q6TDU7 716 aa21.92■■□□□ 1.1
CDH6-203ENST00000506396 SYAP1Q96A49 352 aaPredicted RBP21.92■■□□□ 1.1
CDH6-203ENST00000506396 DNAJC2Q99543 621 aaKnown RBP21.92■■□□□ 1.1
CDH6-203ENST00000506396 STK26Q9P289 416 aa21.92■■□□□ 1.1
CDH6-203ENST00000506396 CTIFO43310 598 aaKnown RBP21.91■■□□□ 1.1
CDH6-203ENST00000506396 SDSP20132 328 aa21.91■■□□□ 1.1
CDH6-203ENST00000506396 TERF2IPQ9NYB0 399 aa21.91■■□□□ 1.1
CDH6-203ENST00000506396 NPATQ14207 1427 aa21.91■■□□□ 1.1
CDH6-203ENST00000506396 APBB1O00213 710 aa21.91■■□□□ 1.1
CDH6-203ENST00000506396 HMOX1P09601 288 aa21.91■■□□□ 1.1
CDH6-203ENST00000506396 PHACTR3Q96KR7 559 aa21.91■■□□□ 1.1
CDH6-203ENST00000506396 TIGD1Q96MW7 591 aa21.91■■□□□ 1.1
CDH6-203ENST00000506396 RPGRIP1LQ68CZ1 1315 aa21.9■■□□□ 1.1
CDH6-203ENST00000506396 TWISTNBQ3B726 338 aaPredicted RBP21.9■■□□□ 1.1
CDH6-203ENST00000506396 MBIPQ9NS73 344 aa21.9■■□□□ 1.1
CDH6-203ENST00000506396 PNPLA6Q8IY17 1366 aa21.9■■□□□ 1.1
CDH6-203ENST00000506396 API5Q9BZZ5 524 aaKnown RBP21.9■■□□□ 1.1
CDH6-203ENST00000506396 FAM135BQ49AJ0 1406 aa21.89■■□□□ 1.1
CDH6-203ENST00000506396 GNAI1P63096 354 aa21.89■■□□□ 1.1
CDH6-203ENST00000506396 NFE2L2Q16236 605 aa21.89■■□□□ 1.09
CDH6-203ENST00000506396 CTNNA3Q9UI47 895 aa21.89■■□□□ 1.09
CDH6-203ENST00000506396 LMTK2Q8IWU2 1503 aa21.88■■□□□ 1.09
CDH6-203ENST00000506396 PLCB2Q00722 1185 aa21.88■■□□□ 1.09
CDH6-203ENST00000506396 NCBP1Q09161 790 aaKnown RBP21.88■■□□□ 1.09
CDH6-203ENST00000506396 FBLN1P23142 703 aa21.88■■□□□ 1.09
CDH6-203ENST00000506396 UVSSAQ2YD98 709 aa21.88■■□□□ 1.09
CDH6-203ENST00000506396 FAM184AQ8NB25 1140 aa21.87■■□□□ 1.09
CDH6-203ENST00000506396 KNDC1Q76NI1 1749 aa21.87■■□□□ 1.09
CDH6-203ENST00000506396 SMARCA5O60264 1052 aaPredicted RBP21.87■■□□□ 1.09
CDH6-203ENST00000506396 PHF14O94880 888 aa21.87■■□□□ 1.09
CDH6-203ENST00000506396 REC8O95072 547 aa21.87■■□□□ 1.09
CDH6-203ENST00000506396 IFT57Q9NWB7 429 aa21.87■■□□□ 1.09
CDH6-203ENST00000506396 CAMSAP1Q5T5Y3 1602 aa21.87■■□□□ 1.09
CDH6-203ENST00000506396 GGT6Q6P531 493 aa21.87■■□□□ 1.09
CDH6-203ENST00000506396 C8orf58Q8NAV2 365 aa21.87■■□□□ 1.09
CDH6-203ENST00000506396 KIAA1524Q8TCG1 905 aa21.87■■□□□ 1.09
CDH6-203ENST00000506396 PYCARDQ9ULZ3 195 aa21.87■■□□□ 1.09
CDH6-203ENST00000506396 MINK1Q8N4C8 1332 aaPredicted RBP21.86■■□□□ 1.09
CDH6-203ENST00000506396 SLC20A2Q08357 652 aa21.86■■□□□ 1.09
CDH6-203ENST00000506396 UHRF1BP1LA0JNW5 1464 aa21.86■■□□□ 1.09
CDH6-203ENST00000506396 VGFO15240 615 aaPredicted RBP21.85■■□□□ 1.09
CDH6-203ENST00000506396 TERF2Q15554 542 aa21.85■■□□□ 1.09
CDH6-203ENST00000506396 FOXD4L6Q3SYB3 417 aaPredicted RBP21.85■■□□□ 1.09
CDH6-203ENST00000506396 FOXD4L3Q6VB84 417 aaPredicted RBP21.85■■□□□ 1.09
CDH6-203ENST00000506396 DDX41Q9UJV9 622 aaKnown RBP21.85■■□□□ 1.09
CDH6-203ENST00000506396 ANKRD26Q9UPS8 1709 aa21.85■■□□□ 1.09
CDH6-203ENST00000506396 ABCA9Q8IUA7 1624 aa21.85■■□□□ 1.09
CDH6-203ENST00000506396 ERICH4A6NGS2 130 aa21.85■■□□□ 1.09
CDH6-203ENST00000506396 NEK4P51957 841 aa21.84■■□□□ 1.09
CDH6-203ENST00000506396 TMX3Q96JJ7 454 aa21.83■■□□□ 1.09
CDH6-203ENST00000506396 ERC2O15083 957 aa21.83■■□□□ 1.08
CDH6-203ENST00000506396 ANKRD44Q8N8A2 993 aa21.83■■□□□ 1.08
CDH6-203ENST00000506396 ZFYVE9O95405 1425 aa21.83■■□□□ 1.08
CDH6-203ENST00000506396 HCLS1P14317 486 aaPredicted RBP21.82■■□□□ 1.08
CDH6-203ENST00000506396 HDGFL2Q7Z4V5 671 aaPredicted RBP21.82■■□□□ 1.08
CDH6-203ENST00000506396 CERS3Q8IU89 383 aa21.82■■□□□ 1.08
CDH6-203ENST00000506396 GDPD2Q9HCC8 539 aa21.82■■□□□ 1.08
CDH6-203ENST00000506396 CD163L1Q9NR16 1453 aa21.82■■□□□ 1.08
CDH6-203ENST00000506396 ZNF853P0CG23 659 aa21.82■■□□□ 1.08
CDH6-203ENST00000506396 IRX3P78415 501 aaPredicted RBP21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms