RNA–Protein interactions for RNA: ENST00000506252.1

SREK1IP1-202, Transcript of SREK1 interacting protein 1, humanhuman

TSL 3

Gene SREK1IP1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1IP1-202ENST00000506252 ERBB3P21860 1342 aa15.5■□□□□ 0.07
SREK1IP1-202ENST00000506252 PRIM1P49642 420 aaKnown RBP15.49■□□□□ 0.07
SREK1IP1-202ENST00000506252 CCNL1Q9UK58 526 aaPredicted RBP15.49■□□□□ 0.07
SREK1IP1-202ENST00000506252 C5P01031 1676 aa15.48■□□□□ 0.07
SREK1IP1-202ENST00000506252 TAF1LQ8IZX4 1826 aa15.47■□□□□ 0.07
SREK1IP1-202ENST00000506252 TTC21AQ8NDW8 1320 aa15.47■□□□□ 0.07
SREK1IP1-202ENST00000506252 ANKRD24Q8TF21 1146 aa15.47■□□□□ 0.07
SREK1IP1-202ENST00000506252 ZNF692Q9BU19 519 aaPredicted RBP15.47■□□□□ 0.07
SREK1IP1-202ENST00000506252 RAB3GAP2Q9H2M9 1393 aa15.47■□□□□ 0.07
SREK1IP1-202ENST00000506252 IGSF1Q8N6C5 1336 aa15.46■□□□□ 0.07
SREK1IP1-202ENST00000506252 TNS4Q8IZW8 715 aa15.46■□□□□ 0.07
SREK1IP1-202ENST00000506252 MON2Q7Z3U7 1717 aa15.46■□□□□ 0.06
SREK1IP1-202ENST00000506252 TOMM70O94826 608 aa15.45■□□□□ 0.06
SREK1IP1-202ENST00000506252 ANKRD36BQ8N2N9 1353 aa15.45■□□□□ 0.06
SREK1IP1-202ENST00000506252 RGPD2P0DJD1 1756 aa15.44■□□□□ 0.06
SREK1IP1-202ENST00000506252 PRELPP51888 382 aa15.44■□□□□ 0.06
SREK1IP1-202ENST00000506252 HTRA3P83110 453 aa15.44■□□□□ 0.06
SREK1IP1-202ENST00000506252 CNKSR2Q8WXI2 1034 aa15.44■□□□□ 0.06
SREK1IP1-202ENST00000506252 NSD2O96028 1365 aa15.44■□□□□ 0.06
SREK1IP1-202ENST00000506252 KTN1Q86UP2 1357 aaKnown RBP15.44■□□□□ 0.06
SREK1IP1-202ENST00000506252 USP54Q70EL1 1684 aa15.44■□□□□ 0.06
SREK1IP1-202ENST00000506252 EVC2Q86UK5 1308 aa15.43■□□□□ 0.06
SREK1IP1-202ENST00000506252 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.43■□□□□ 0.06
SREK1IP1-202ENST00000506252 FAM208AQ9UK61 1670 aaKnown RBP15.43■□□□□ 0.06
SREK1IP1-202ENST00000506252 USP47Q96K76 1375 aa15.41■□□□□ 0.06
SREK1IP1-202ENST00000506252 KLRG1Q96E93 195 aa15.41■□□□□ 0.06
SREK1IP1-202ENST00000506252 LTV1Q96GA3 475 aaPredicted RBP15.41■□□□□ 0.06
SREK1IP1-202ENST00000506252 N4BP2Q86UW6 1770 aaPredicted RBP15.4■□□□□ 0.06
SREK1IP1-202ENST00000506252 NME9Q86XW9 330 aa15.4■□□□□ 0.06
SREK1IP1-202ENST00000506252 NMRK2Q9NPI5 230 aa15.4■□□□□ 0.06
SREK1IP1-202ENST00000506252 UBR3Q6ZT12 1888 aa15.4■□□□□ 0.06
SREK1IP1-202ENST00000506252 FLAD1Q8NFF5 587 aa15.39■□□□□ 0.05
SREK1IP1-202ENST00000506252 CICQ96RK0 1608 aaPredicted RBP15.39■□□□□ 0.05
SREK1IP1-202ENST00000506252 TOGARAM1Q9Y4F4 1720 aa15.38■□□□□ 0.05
SREK1IP1-202ENST00000506252 JMYQ8N9B5 988 aa15.38■□□□□ 0.05
SREK1IP1-202ENST00000506252 USP31Q70CQ4 1352 aa15.37■□□□□ 0.05
SREK1IP1-202ENST00000506252 C4BP0C0L5 1744 aa15.37■□□□□ 0.05
SREK1IP1-202ENST00000506252 ZCRB1Q8TBF4 217 aaKnown RBP15.36■□□□□ 0.05
SREK1IP1-202ENST00000506252 PHF14O94880 888 aa15.35■□□□□ 0.05
SREK1IP1-202ENST00000506252 SMIM5Q71RC9 77 aa15.35■□□□□ 0.05
SREK1IP1-202ENST00000506252 C16orf71Q8IYS4 520 aaPredicted RBP15.35■□□□□ 0.05
SREK1IP1-202ENST00000506252 RBM46Q8TBY0 533 aaKnown RBP15.35■□□□□ 0.05
SREK1IP1-202ENST00000506252 ITGB4P16144 1822 aa15.35■□□□□ 0.05
SREK1IP1-202ENST00000506252 KIF13BQ9NQT8 1826 aa15.34■□□□□ 0.05
SREK1IP1-202ENST00000506252 KIAA1551Q9HCM1 1747 aa15.34■□□□□ 0.05
SREK1IP1-202ENST00000506252 AMIGO3Q86WK7 504 aa15.33■□□□□ 0.04
SREK1IP1-202ENST00000506252 IP6K1Q92551 441 aa15.33■□□□□ 0.04
SREK1IP1-202ENST00000506252 AK7Q96M32 723 aa15.33■□□□□ 0.04
SREK1IP1-202ENST00000506252 MEGF6O75095 1541 aa15.33■□□□□ 0.04
SREK1IP1-202ENST00000506252 ARHGAP27Q6ZUM4 889 aa15.32■□□□□ 0.04
SREK1IP1-202ENST00000506252 BCS1LQ9Y276 419 aa15.32■□□□□ 0.04
SREK1IP1-202ENST00000506252 PKD1L3Q7Z443 1732 aa15.31■□□□□ 0.04
SREK1IP1-202ENST00000506252 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.31■□□□□ 0.04
SREK1IP1-202ENST00000506252 PALLDQ8WX93 1383 aa15.31■□□□□ 0.04
SREK1IP1-202ENST00000506252 SBNO2Q9Y2G9 1366 aa15.31■□□□□ 0.04
SREK1IP1-202ENST00000506252 BRCA1P38398 1863 aaKnown RBP15.3■□□□□ 0.04
SREK1IP1-202ENST00000506252 PXDNLA1KZ92 1463 aa15.29■□□□□ 0.04
SREK1IP1-202ENST00000506252 HMGB2P26583 209 aaKnown RBP15.29■□□□□ 0.04
SREK1IP1-202ENST00000506252 FSTL1Q12841 308 aa15.29■□□□□ 0.04
SREK1IP1-202ENST00000506252 MPRIPQ6WCQ1 1025 aa15.29■□□□□ 0.04
SREK1IP1-202ENST00000506252 CD163L1Q9NR16 1453 aa15.28■□□□□ 0.04
SREK1IP1-202ENST00000506252 A0A0G2JLW4 131 aa15.28■□□□□ 0.04
SREK1IP1-202ENST00000506252 TMC1Q8TDI8 760 aa15.28■□□□□ 0.04
SREK1IP1-202ENST00000506252 ARFGEF1Q9Y6D6 1849 aa15.28■□□□□ 0.04
SREK1IP1-202ENST00000506252 HSPA1AP0DMV8 641 aaKnown RBP15.27■□□□□ 0.04
SREK1IP1-202ENST00000506252 HSPA1BP0DMV9 641 aaKnown RBP15.27■□□□□ 0.04
SREK1IP1-202ENST00000506252 TNRC6CQ9HCJ0 1690 aaKnown RBP15.27■□□□□ 0.03
SREK1IP1-202ENST00000506252 KCPQ6ZWJ8 1503 aa15.27■□□□□ 0.03
SREK1IP1-202ENST00000506252 SBF1O95248 1867 aa15.27■□□□□ 0.03
SREK1IP1-202ENST00000506252 SLC34A2O95436 690 aa15.26■□□□□ 0.03
SREK1IP1-202ENST00000506252 HOXD11P31277 338 aaPredicted RBP15.26■□□□□ 0.03
SREK1IP1-202ENST00000506252 NCBP3Q53F19 620 aaKnown RBP15.26■□□□□ 0.03
SREK1IP1-202ENST00000506252 C9orf131Q5VYM1 1079 aa15.26■□□□□ 0.03
SREK1IP1-202ENST00000506252 USHBP1Q8N6Y0 703 aa15.26■□□□□ 0.03
SREK1IP1-202ENST00000506252 NSD3Q9BZ95 1437 aa15.26■□□□□ 0.03
SREK1IP1-202ENST00000506252 MAP2P11137 1827 aaKnown RBP15.25■□□□□ 0.03
SREK1IP1-202ENST00000506252 FCHSD2O94868 740 aa15.25■□□□□ 0.03
SREK1IP1-202ENST00000506252 MMP10P09238 476 aa15.25■□□□□ 0.03
SREK1IP1-202ENST00000506252 HOXC9P31274 260 aa15.25■□□□□ 0.03
SREK1IP1-202ENST00000506252 AMPHP49418 695 aa15.25■□□□□ 0.03
SREK1IP1-202ENST00000506252 HDGFL2Q7Z4V5 671 aaPredicted RBP15.25■□□□□ 0.03
SREK1IP1-202ENST00000506252 RRAGCQ9HB90 399 aa15.25■□□□□ 0.03
SREK1IP1-202ENST00000506252 EDC4Q6P2E9 1401 aaKnown RBP15.25■□□□□ 0.03
SREK1IP1-202ENST00000506252 MAP3K19Q56UN5 1328 aa15.24■□□□□ 0.03
SREK1IP1-202ENST00000506252 FBLN1P23142 703 aa15.24■□□□□ 0.03
SREK1IP1-202ENST00000506252 SSFA2P28290 1259 aa15.24■□□□□ 0.03
SREK1IP1-202ENST00000506252 PLEKHG2Q9H7P9 1386 aa15.24■□□□□ 0.03
SREK1IP1-202ENST00000506252 KDM2BQ8NHM5 1336 aa15.23■□□□□ 0.03
SREK1IP1-202ENST00000506252 PCNTO95613 3336 aa15.23■□□□□ 0.03
SREK1IP1-202ENST00000506252 TGFB2P61812 414 aa15.23■□□□□ 0.03
SREK1IP1-202ENST00000506252 NBPF6Q5VWK0 638 aa15.23■□□□□ 0.03
SREK1IP1-202ENST00000506252 RAPGEF4Q8WZA2 1011 aa15.23■□□□□ 0.03
SREK1IP1-202ENST00000506252 SMARCC1Q92922 1105 aaPredicted RBP15.23■□□□□ 0.03
SREK1IP1-202ENST00000506252 NBPF4Q96M43 638 aa15.23■□□□□ 0.03
SREK1IP1-202ENST00000506252 SLC12A5Q9H2X9 1139 aa15.23■□□□□ 0.03
SREK1IP1-202ENST00000506252 RNF216Q9NWF9 866 aaPredicted RBP15.23■□□□□ 0.03
SREK1IP1-202ENST00000506252 DPEP1P16444 411 aa15.22■□□□□ 0.03
SREK1IP1-202ENST00000506252 LINC00116Q8NCU8 138 aa15.22■□□□□ 0.03
SREK1IP1-202ENST00000506252 ROCK2O75116 1388 aaKnown RBP15.22■□□□□ 0.03
SREK1IP1-202ENST00000506252 PCDH11XQ9BZA7 1347 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms