RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 DDX54Q8TDD1 881 aaKnown RBP15.53■□□□□ 0.08
KDM3B-203ENST00000505756 RGPD3A6NKT7 1758 aaPredicted RBP15.53■□□□□ 0.08
KDM3B-203ENST00000505756 RGPD4Q7Z3J3 1758 aa15.53■□□□□ 0.08
KDM3B-203ENST00000505756 NHSQ6T4R5 1651 aa15.53■□□□□ 0.08
KDM3B-203ENST00000505756 PLSCR1O15162 318 aa15.52■□□□□ 0.08
KDM3B-203ENST00000505756 PTF1AQ7RTS3 328 aa15.52■□□□□ 0.08
KDM3B-203ENST00000505756 EYA1Q99502 592 aa15.52■□□□□ 0.08
KDM3B-203ENST00000505756 SHANK3Q9BYB0 1731 aa15.51■□□□□ 0.07
KDM3B-203ENST00000505756 RREB1Q92766 1687 aa15.51■□□□□ 0.07
KDM3B-203ENST00000505756 CC2D1BQ5T0F9 858 aaKnown RBP15.51■□□□□ 0.07
KDM3B-203ENST00000505756 KCNQ2O43526 872 aa15.5■□□□□ 0.07
KDM3B-203ENST00000505756 ACSBG1Q96GR2 724 aa15.5■□□□□ 0.07
KDM3B-203ENST00000505756 IGSF1Q8N6C5 1336 aa15.49■□□□□ 0.07
KDM3B-203ENST00000505756 PCDH11XQ9BZA7 1347 aa15.49■□□□□ 0.07
KDM3B-203ENST00000505756 PCDH11YQ9BZA8 1340 aa15.49■□□□□ 0.07
KDM3B-203ENST00000505756 PLEKHG2Q9H7P9 1386 aa15.49■□□□□ 0.07
KDM3B-203ENST00000505756 NUP188Q5SRE5 1749 aa15.48■□□□□ 0.07
KDM3B-203ENST00000505756 PKD1L3Q7Z443 1732 aa15.48■□□□□ 0.07
KDM3B-203ENST00000505756 MTHFSP49914 203 aa15.47■□□□□ 0.07
KDM3B-203ENST00000505756 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.47■□□□□ 0.075e-6■■■■□ 22.9
KDM3B-203ENST00000505756 SPG7Q9UQ90 795 aa15.47■□□□□ 0.07
KDM3B-203ENST00000505756 DOT1LQ8TEK3 1739 aa15.46■□□□□ 0.06
KDM3B-203ENST00000505756 IL13P35225 146 aa15.45■□□□□ 0.06
KDM3B-203ENST00000505756 NBPF14Q5TI25 921 aa15.45■□□□□ 0.06
KDM3B-203ENST00000505756 BTAF1O14981 1849 aa15.45■□□□□ 0.06
KDM3B-203ENST00000505756 PSDA5PKW4 1024 aaPredicted RBP15.44■□□□□ 0.06
KDM3B-203ENST00000505756 CYP27B1O15528 508 aa15.44■□□□□ 0.06
KDM3B-203ENST00000505756 CNGB1Q14028 1251 aaPredicted RBP15.44■□□□□ 0.06
KDM3B-203ENST00000505756 PROM2Q8N271 834 aa15.44■□□□□ 0.06
KDM3B-203ENST00000505756 SYTL4Q96C24 671 aaPredicted RBP15.44■□□□□ 0.06
KDM3B-203ENST00000505756 PRIM1P49642 420 aaKnown RBP15.43■□□□□ 0.06
KDM3B-203ENST00000505756 R3HDM1Q15032 1099 aaKnown RBP15.43■□□□□ 0.06
KDM3B-203ENST00000505756 TXNRD1Q16881 649 aa15.43■□□□□ 0.06
KDM3B-203ENST00000505756 KDRP35968 1356 aa15.42■□□□□ 0.06
KDM3B-203ENST00000505756 NKX1-1Q15270 411 aaPredicted RBP15.41■□□□□ 0.06
KDM3B-203ENST00000505756 SULT6B1Q6IMI4 303 aa15.41■□□□□ 0.06
KDM3B-203ENST00000505756 IFNL2Q8IZJ0 200 aa15.41■□□□□ 0.06
KDM3B-203ENST00000505756 DIAPH1O60610 1272 aaKnown RBP15.4■□□□□ 0.06
KDM3B-203ENST00000505756 AEBP1Q8IUX7 1158 aa15.4■□□□□ 0.06
KDM3B-203ENST00000505756 PHKG2P15735 406 aa15.39■□□□□ 0.05
KDM3B-203ENST00000505756 AMOTQ4VCS5 1084 aa15.39■□□□□ 0.05
KDM3B-203ENST00000505756 PLEKHO1Q53GL0 409 aaPredicted RBP15.39■□□□□ 0.05
KDM3B-203ENST00000505756 COL3A1P02461 1466 aaPredicted RBP15.39■□□□□ 0.05
KDM3B-203ENST00000505756 TOGARAM1Q9Y4F4 1720 aa15.38■□□□□ 0.05
KDM3B-203ENST00000505756 SLC27A3Q5K4L6 730 aa15.38■□□□□ 0.05
KDM3B-203ENST00000505756 ANO8Q9HCE9 1232 aaPredicted RBP15.38■□□□□ 0.05
KDM3B-203ENST00000505756 KAT6BQ8WYB5 2073 aa15.38■□□□□ 0.05
KDM3B-203ENST00000505756 SRCAPQ6ZRS2 3230 aa15.37■□□□□ 0.05
KDM3B-203ENST00000505756 PAPPAQ13219 1627 aa15.36■□□□□ 0.05
KDM3B-203ENST00000505756 HSP90AB1P08238 724 aaKnown RBP15.36■□□□□ 0.05
KDM3B-203ENST00000505756 PPP2R1AP30153 589 aa15.36■□□□□ 0.05
KDM3B-203ENST00000505756 MPRIPQ6WCQ1 1025 aa15.36■□□□□ 0.05
KDM3B-203ENST00000505756 CFAP53Q96M91 514 aa15.36■□□□□ 0.05
KDM3B-203ENST00000505756 STK32BQ9NY57 414 aa15.36■□□□□ 0.05
KDM3B-203ENST00000505756 LRP5O75197 1615 aa15.35■□□□□ 0.05
KDM3B-203ENST00000505756 LY75O60449 1722 aa15.35■□□□□ 0.05
KDM3B-203ENST00000505756 SLC15A2Q16348 729 aa15.35■□□□□ 0.05
KDM3B-203ENST00000505756 ZNF530Q6P9A1 599 aaPredicted RBP15.35■□□□□ 0.05
KDM3B-203ENST00000505756 LRRC4BQ9NT99 713 aa15.35■□□□□ 0.05
KDM3B-203ENST00000505756 ITGB4P16144 1822 aa15.34■□□□□ 0.05
KDM3B-203ENST00000505756 HMOX1P09601 288 aa15.34■□□□□ 0.05
KDM3B-203ENST00000505756 C1orf141Q5JVX7 400 aa15.34■□□□□ 0.05
KDM3B-203ENST00000505756 DCAF5Q96JK2 942 aa15.34■□□□□ 0.05
KDM3B-203ENST00000505756 PIGBQ92521 554 aa15.33■□□□□ 0.04
KDM3B-203ENST00000505756 SMARCC1Q92922 1105 aaPredicted RBP15.33■□□□□ 0.04
KDM3B-203ENST00000505756 TMOD3Q9NYL9 352 aa15.33■□□□□ 0.04
KDM3B-203ENST00000505756 CCNL1Q9UK58 526 aaPredicted RBP15.33■□□□□ 0.04
KDM3B-203ENST00000505756 PALLDQ8WX93 1383 aa15.33■□□□□ 0.04
KDM3B-203ENST00000505756 ERVV-2B6SEH9 535 aa15.32■□□□□ 0.04
KDM3B-203ENST00000505756 U2SURPO15042 1029 aaKnown RBP15.32■□□□□ 0.04
KDM3B-203ENST00000505756 DDX10Q13206 875 aaKnown RBP15.32■□□□□ 0.04
KDM3B-203ENST00000505756 DIEXFQ68CQ4 756 aaKnown RBP15.32■□□□□ 0.04
KDM3B-203ENST00000505756 HMGB2P26583 209 aaKnown RBP15.31■□□□□ 0.04
KDM3B-203ENST00000505756 NUDCQ9Y266 331 aa15.31■□□□□ 0.04
KDM3B-203ENST00000505756 KDM6AO15550 1401 aaPredicted RBP15.31■□□□□ 0.04
KDM3B-203ENST00000505756 CASZ1Q86V15 1759 aa15.31■□□□□ 0.04
KDM3B-203ENST00000505756 KCNQ4P56696 695 aa15.3■□□□□ 0.04
KDM3B-203ENST00000505756 AKAP4Q5JQC9 854 aa15.3■□□□□ 0.04
KDM3B-203ENST00000505756 AKT1S1Q96B36 256 aa15.3■□□□□ 0.04
KDM3B-203ENST00000505756 ZNF827Q17R98 1081 aa15.29■□□□□ 0.04
KDM3B-203ENST00000505756 RALBP1Q15311 655 aa15.28■□□□□ 0.04
KDM3B-203ENST00000505756 MTHFSDQ2M296 383 aaKnown RBP15.28■□□□□ 0.04
KDM3B-203ENST00000505756 CABP4P57796 275 aa15.27■□□□□ 0.04
KDM3B-203ENST00000505756 PDGFDQ9GZP0 370 aaPredicted RBP15.27■□□□□ 0.04
KDM3B-203ENST00000505756 SPON1Q9HCB6 807 aa15.27■□□□□ 0.04
KDM3B-203ENST00000505756 ATG3Q9NT62 314 aa15.27■□□□□ 0.04
KDM3B-203ENST00000505756 ASAP1Q9ULH1 1129 aa15.27■□□□□ 0.04
KDM3B-203ENST00000505756 QSER1Q2KHR3 1735 aa15.26■□□□□ 0.03
KDM3B-203ENST00000505756 C5P01031 1676 aa15.26■□□□□ 0.03
KDM3B-203ENST00000505756 RSPH6AQ9H0K4 717 aa15.26■□□□□ 0.03
KDM3B-203ENST00000505756 LOC102724428A0A0B4J2F2 783 aa15.25■□□□□ 0.03
KDM3B-203ENST00000505756 U2AF1L5P0DN76 240 aaPredicted RBP15.25■□□□□ 0.03
KDM3B-203ENST00000505756 SIK1P57059 783 aa15.25■□□□□ 0.03
KDM3B-203ENST00000505756 U2AF1Q01081 240 aaKnown RBP eCLIP15.25■□□□□ 0.03
KDM3B-203ENST00000505756 GAS2L2Q8NHY3 880 aa15.25■□□□□ 0.03
KDM3B-203ENST00000505756 TFCP2L1Q9NZI6 479 aa15.25■□□□□ 0.03
KDM3B-203ENST00000505756 SCN11AQ9UI33 1791 aa15.25■□□□□ 0.03
KDM3B-203ENST00000505756 PRKAR2BP31323 418 aa15.24■□□□□ 0.03
KDM3B-203ENST00000505756 NFATC2IPQ8NCF5 419 aa15.24■□□□□ 0.03
KDM3B-203ENST00000505756 MRC1P22897 1456 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms