RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 GJD4Q96KN9 370 aaPredicted RBP10.41□□□□□ -0.74
COL4A5-208ENST00000505728 IFT57Q9NWB7 429 aa10.41□□□□□ -0.74
COL4A5-208ENST00000505728 NRAPQ86VF7 1730 aa10.41□□□□□ -0.74
COL4A5-208ENST00000505728 CRYBG1Q9Y4K1 1723 aa10.41□□□□□ -0.74
COL4A5-208ENST00000505728 TNS3Q68CZ2 1445 aa10.41□□□□□ -0.74
COL4A5-208ENST00000505728 ALS2Q96Q42 1657 aa10.41□□□□□ -0.74
COL4A5-208ENST00000505728 DLG5Q8TDM6 1919 aa10.41□□□□□ -0.74
COL4A5-208ENST00000505728 KDRP35968 1356 aa10.4□□□□□ -0.74
COL4A5-208ENST00000505728 BCAR3O75815 825 aa10.4□□□□□ -0.74
COL4A5-208ENST00000505728 GCP02774 474 aa10.4□□□□□ -0.74
COL4A5-208ENST00000505728 ZNF853P0CG23 659 aa10.4□□□□□ -0.74
COL4A5-208ENST00000505728 B4GALNT3Q6L9W6 998 aa10.4□□□□□ -0.74
COL4A5-208ENST00000505728 ARHGEF25Q86VW2 580 aa10.4□□□□□ -0.74
COL4A5-208ENST00000505728 AEBP1Q8IUX7 1158 aa10.4□□□□□ -0.74
COL4A5-208ENST00000505728 ZNF428Q96B54 188 aa10.4□□□□□ -0.74
COL4A5-208ENST00000505728 SLIT3O75094 1523 aa10.39□□□□□ -0.75
COL4A5-208ENST00000505728 NFAT5O94916 1531 aa10.39□□□□□ -0.75
COL4A5-208ENST00000505728 HTATSF1O43719 755 aaKnown RBP10.39□□□□□ -0.75
COL4A5-208ENST00000505728 EXOSC9Q06265 439 aaKnown RBP10.39□□□□□ -0.75
COL4A5-208ENST00000505728 UNC5CLQ8IV45 518 aa10.39□□□□□ -0.75
COL4A5-208ENST00000505728 GAS2L2Q8NHY3 880 aa10.39□□□□□ -0.75
COL4A5-208ENST00000505728 CABLES1Q8TDN4 633 aa10.39□□□□□ -0.75
COL4A5-208ENST00000505728 CRBNQ96SW2 442 aa10.39□□□□□ -0.75
COL4A5-208ENST00000505728 PHRF1Q9P1Y6 1649 aaKnown RBP10.38□□□□□ -0.75
COL4A5-208ENST00000505728 LMOD2Q6P5Q4 547 aa10.38□□□□□ -0.75
COL4A5-208ENST00000505728 TSR2Q969E8 191 aaKnown RBP10.38□□□□□ -0.75
COL4A5-208ENST00000505728 CFAP44Q96MT7 982 aa10.38□□□□□ -0.75
COL4A5-208ENST00000505728 LTN1O94822 1766 aa10.38□□□□□ -0.75
COL4A5-208ENST00000505728 PLEKHG5O94827 1062 aa10.37□□□□□ -0.75
COL4A5-208ENST00000505728 MS4A1P11836 297 aa10.37□□□□□ -0.75
COL4A5-208ENST00000505728 AAMPQ13685 434 aa10.37□□□□□ -0.75
COL4A5-208ENST00000505728 BRPF1P55201 1214 aaPredicted RBP10.36□□□□□ -0.75
COL4A5-208ENST00000505728 ALDH1L2Q3SY69 923 aa10.36□□□□□ -0.75
COL4A5-208ENST00000505728 C20orf194Q5TEA3 1177 aa10.36□□□□□ -0.75
COL4A5-208ENST00000505728 LTV1Q96GA3 475 aaPredicted RBP10.36□□□□□ -0.75
COL4A5-208ENST00000505728 COL14A1Q05707 1796 aaKnown RBP10.35□□□□□ -0.75
COL4A5-208ENST00000505728 CHL1O00533 1208 aa10.35□□□□□ -0.75
COL4A5-208ENST00000505728 CANXP27824 592 aaKnown RBP10.35□□□□□ -0.75
COL4A5-208ENST00000505728 MTHFSDQ2M296 383 aaKnown RBP10.35□□□□□ -0.75
COL4A5-208ENST00000505728 CCDC125Q86Z20 511 aa10.35□□□□□ -0.75
COL4A5-208ENST00000505728 RTF1Q92541 710 aaKnown RBP10.35□□□□□ -0.75
COL4A5-208ENST00000505728 THUMPD2Q9BTF0 503 aaKnown RBP10.35□□□□□ -0.75
COL4A5-208ENST00000505728 LAS1LQ9Y4W2 734 aaKnown RBP10.35□□□□□ -0.75
COL4A5-208ENST00000505728 FAM83GA6ND36 823 aa10.34□□□□□ -0.75
COL4A5-208ENST00000505728 IPO8O15397 1037 aaKnown RBP10.34□□□□□ -0.75
COL4A5-208ENST00000505728 VAMP4O75379 141 aa10.34□□□□□ -0.75
COL4A5-208ENST00000505728 HAP1P54257 671 aaPredicted RBP10.34□□□□□ -0.75
COL4A5-208ENST00000505728 VPS72Q15906 364 aa10.34□□□□□ -0.75
COL4A5-208ENST00000505728 ZKSCAN2Q63HK3 967 aa10.34□□□□□ -0.75
COL4A5-208ENST00000505728 MBIPQ9NS73 344 aa10.34□□□□□ -0.75
COL4A5-208ENST00000505728 ZBTB7CA1YPR0 619 aa10.33□□□□□ -0.76
COL4A5-208ENST00000505728 GNAT3A8MTJ3 354 aa10.33□□□□□ -0.76
COL4A5-208ENST00000505728 DCTN1Q14203 1278 aa10.33□□□□□ -0.76
COL4A5-208ENST00000505728 NBPF6Q5VWK0 638 aa10.33□□□□□ -0.76
COL4A5-208ENST00000505728 SEPT12Q8IYM1 358 aa10.33□□□□□ -0.76
COL4A5-208ENST00000505728 SSH1Q8WYL5 1049 aa10.33□□□□□ -0.76
COL4A5-208ENST00000505728 FRAT1Q92837 279 aaPredicted RBP10.33□□□□□ -0.76
COL4A5-208ENST00000505728 NBPF4Q96M43 638 aa10.33□□□□□ -0.76
COL4A5-208ENST00000505728 SMC4Q9NTJ3 1288 aa10.33□□□□□ -0.76
COL4A5-208ENST00000505728 BABAM1Q9NWV8 329 aa10.33□□□□□ -0.76
COL4A5-208ENST00000505728 ONECUT3O60422 494 aaPredicted RBP10.32□□□□□ -0.76
COL4A5-208ENST00000505728 AMOTQ4VCS5 1084 aa10.32□□□□□ -0.76
COL4A5-208ENST00000505728 PLEKHO1Q53GL0 409 aaPredicted RBP10.32□□□□□ -0.76
COL4A5-208ENST00000505728 DEFB132Q7Z7B7 95 aa10.32□□□□□ -0.76
COL4A5-208ENST00000505728 ANKRD24Q8TF21 1146 aa10.32□□□□□ -0.76
COL4A5-208ENST00000505728 CRB1P82279 1406 aa10.32□□□□□ -0.76
COL4A5-208ENST00000505728 NCAPD2Q15021 1401 aa10.32□□□□□ -0.76
COL4A5-208ENST00000505728 KIF16BQ96L93 1317 aa10.32□□□□□ -0.76
COL4A5-208ENST00000505728 KIAA0232Q92628 1395 aa10.31□□□□□ -0.76
COL4A5-208ENST00000505728 MCM10Q7L590 875 aa10.31□□□□□ -0.76
COL4A5-208ENST00000505728 DZIP1LQ8IYY4 767 aaKnown RBP10.31□□□□□ -0.76
COL4A5-208ENST00000505728 ARHGAP45Q92619 1136 aa10.31□□□□□ -0.76
COL4A5-208ENST00000505728 THSD7AQ9UPZ6 1657 aa10.31□□□□□ -0.76
COL4A5-208ENST00000505728 TNS1Q9HBL0 1735 aaKnown RBP10.3□□□□□ -0.76
COL4A5-208ENST00000505728 CPDO75976 1380 aa10.3□□□□□ -0.76
COL4A5-208ENST00000505728 ABCC6O95255 1503 aa10.3□□□□□ -0.76
COL4A5-208ENST00000505728 ZC3H6P61129 1189 aaKnown RBP10.3□□□□□ -0.76
COL4A5-208ENST00000505728 TWISTNBQ3B726 338 aaPredicted RBP10.3□□□□□ -0.76
COL4A5-208ENST00000505728 ATF7IPQ6VMQ6 1270 aa10.3□□□□□ -0.76
COL4A5-208ENST00000505728 PANK1Q8TE04 598 aa10.3□□□□□ -0.76
COL4A5-208ENST00000505728 BCL2L13Q9BXK5 485 aa10.3□□□□□ -0.76
COL4A5-208ENST00000505728 AXIN2Q9Y2T1 843 aa10.3□□□□□ -0.76
COL4A5-208ENST00000505728 CCDC9Q9Y3X0 531 aaKnown RBP10.3□□□□□ -0.76
COL4A5-208ENST00000505728 MAP3K5Q99683 1374 aa10.29□□□□□ -0.76
COL4A5-208ENST00000505728 CENPQQ7L2Z9 268 aaPredicted RBP10.29□□□□□ -0.76
COL4A5-208ENST00000505728 KRT27Q7Z3Y8 459 aa10.29□□□□□ -0.76
COL4A5-208ENST00000505728 MRPL50Q8N5N7 158 aaKnown RBP10.29□□□□□ -0.76
COL4A5-208ENST00000505728 USHBP1Q8N6Y0 703 aa10.29□□□□□ -0.76
COL4A5-208ENST00000505728 TSPYL6Q8N831 410 aa10.29□□□□□ -0.76
COL4A5-208ENST00000505728 C8orf58Q8NAV2 365 aa10.29□□□□□ -0.76
COL4A5-208ENST00000505728 TSHZ2Q9NRE2 1034 aa10.29□□□□□ -0.76
COL4A5-208ENST00000505728 BTG4Q9NY30 223 aa10.29□□□□□ -0.76
COL4A5-208ENST00000505728 NOB1Q9ULX3 412 aaKnown RBP10.29□□□□□ -0.76
COL4A5-208ENST00000505728 COG6Q9Y2V7 657 aa10.29□□□□□ -0.76
COL4A5-208ENST00000505728 SOS1Q07889 1333 aaPredicted RBP10.29□□□□□ -0.76
COL4A5-208ENST00000505728 RGPD2P0DJD1 1756 aa10.29□□□□□ -0.76
COL4A5-208ENST00000505728 COL18A1P39060 1754 aa10.29□□□□□ -0.76
COL4A5-208ENST00000505728 PLEKHG2Q9H7P9 1386 aa10.28□□□□□ -0.76
COL4A5-208ENST00000505728 MVPQ14764 893 aaKnown RBP10.28□□□□□ -0.76
COL4A5-208ENST00000505728 TAF7Q15545 349 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms