RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 TMPRSS4Q9NRS4 437 aa8.01□□□□□ -1.13
CHD1-203ENST00000505657 ERVH48-1M5A8F1 160 aa8□□□□□ -1.13
CHD1-203ENST00000505657 GDF11O95390 407 aa8□□□□□ -1.13
CHD1-203ENST00000505657 RASSF7Q02833 373 aa8□□□□□ -1.13
CHD1-203ENST00000505657 PPP1R26Q5T8A7 1209 aaPredicted RBP8□□□□□ -1.13
CHD1-203ENST00000505657 C1orf115Q9H7X2 142 aa8□□□□□ -1.13
CHD1-203ENST00000505657 DNMT3LQ9UJW3 386 aa8□□□□□ -1.13
CHD1-203ENST00000505657 SOS2Q07890 1332 aaPredicted RBP8□□□□□ -1.13
CHD1-203ENST00000505657 UPP2O95045 317 aa7.99□□□□□ -1.13
CHD1-203ENST00000505657 LINC00528Q8N1L1 170 aa7.99□□□□□ -1.13
CHD1-203ENST00000505657 CNTNAP3BQ96NU0 1288 aa7.99□□□□□ -1.13
CHD1-203ENST00000505657 CNTNAP3Q9BZ76 1288 aa7.99□□□□□ -1.13
CHD1-203ENST00000505657 ADAMTS8Q9UP79 889 aa7.99□□□□□ -1.13
CHD1-203ENST00000505657 RNF135Q8IUD6 432 aa7.98□□□□□ -1.13
CHD1-203ENST00000505657 MEIOBQ8N635 442 aa7.98□□□□□ -1.13
CHD1-203ENST00000505657 ZNF784Q8NCA9 323 aaPredicted RBP7.98□□□□□ -1.13
CHD1-203ENST00000505657 CALR3Q96L12 384 aaKnown RBP7.98□□□□□ -1.13
CHD1-203ENST00000505657 CDCA7Q9BWT1 371 aaPredicted RBP7.98□□□□□ -1.13
CHD1-203ENST00000505657 SUPT5HO00267 1087 aaKnown RBP7.97□□□□□ -1.13
CHD1-203ENST00000505657 SLFNL1Q499Z3 407 aa7.97□□□□□ -1.13
CHD1-203ENST00000505657 TBC1D9Q6ZT07 1266 aa7.97□□□□□ -1.13
CHD1-203ENST00000505657 SEPT12Q8IYM1 358 aa7.97□□□□□ -1.13
CHD1-203ENST00000505657 ZNF592Q92610 1267 aa7.97□□□□□ -1.13
CHD1-203ENST00000505657 PCDHB11Q9Y5F2 797 aa7.97□□□□□ -1.13
CHD1-203ENST00000505657 SCTRP47872 440 aa7.96□□□□□ -1.14
CHD1-203ENST00000505657 CBLBQ13191 982 aa7.96□□□□□ -1.14
CHD1-203ENST00000505657 CYLDQ9NQC7 956 aa7.96□□□□□ -1.14
CHD1-203ENST00000505657 CHIC2Q9UKJ5 165 aa7.96□□□□□ -1.14
CHD1-203ENST00000505657 LILRA1O75019 489 aa7.95□□□□□ -1.14
CHD1-203ENST00000505657 SKIP12755 728 aa7.95□□□□□ -1.14
CHD1-203ENST00000505657 DHX9Q08211 1270 aaKnown RBP7.95□□□□□ -1.14
CHD1-203ENST00000505657 RNF20Q5VTR2 975 aa7.95□□□□□ -1.14
CHD1-203ENST00000505657 ERICH6Q7L0X2 663 aa7.95□□□□□ -1.14
CHD1-203ENST00000505657 PLPP7Q8NBV4 271 aa7.95□□□□□ -1.14
CHD1-203ENST00000505657 EMILIN1Q9Y6C2 1016 aa7.95□□□□□ -1.14
CHD1-203ENST00000505657 ADD1P35611 737 aaKnown RBP7.94□□□□□ -1.14
CHD1-203ENST00000505657 COL25A1Q9BXS0 654 aaPredicted RBP7.94□□□□□ -1.14
CHD1-203ENST00000505657 DOLKQ9UPQ8 538 aa7.94□□□□□ -1.14
CHD1-203ENST00000505657 FIGNL2A6NMB9 653 aa7.93□□□□□ -1.14
CHD1-203ENST00000505657 PTSQ03393 145 aa7.93□□□□□ -1.14
CHD1-203ENST00000505657 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.93□□□□□ -1.14
CHD1-203ENST00000505657 DEPDC4Q8N2C3 294 aa7.93□□□□□ -1.14
CHD1-203ENST00000505657 TSEN34Q9BSV6 310 aaKnown RBP7.93□□□□□ -1.14
CHD1-203ENST00000505657 PGPEP1Q9NXJ5 209 aa7.93□□□□□ -1.14
CHD1-203ENST00000505657 TTLL8A6PVC2 850 aa7.92□□□□□ -1.14
CHD1-203ENST00000505657 USP17L5A8MUK1 530 aa7.92□□□□□ -1.14
CHD1-203ENST00000505657 ERVK-9P63128 1117 aa7.92□□□□□ -1.14
CHD1-203ENST00000505657 OXLD1Q5BKU9 147 aa7.92□□□□□ -1.14
CHD1-203ENST00000505657 ZNF385CQ66K41 422 aaPredicted RBP7.92□□□□□ -1.14
CHD1-203ENST00000505657 PPP1R12CQ9BZL4 782 aa7.92□□□□□ -1.14
CHD1-203ENST00000505657 TFIP11Q9UBB9 837 aaKnown RBP7.92□□□□□ -1.14
CHD1-203ENST00000505657 PALM3A6NDB9 673 aaPredicted RBP7.91□□□□□ -1.14
CHD1-203ENST00000505657 ATP9BO43861 1147 aa7.91□□□□□ -1.14
CHD1-203ENST00000505657 RNFT1Q5M7Z0 435 aa7.91□□□□□ -1.14
CHD1-203ENST00000505657 Q6ZVU0 165 aa7.91□□□□□ -1.14
CHD1-203ENST00000505657 NFATC2IPQ8NCF5 419 aa7.91□□□□□ -1.14
CHD1-203ENST00000505657 WHAMMQ8TF30 809 aa7.91□□□□□ -1.14
CHD1-203ENST00000505657 AGBL1Q96MI9 1066 aa7.91□□□□□ -1.14
CHD1-203ENST00000505657 USP17L3A6NCW0 530 aa7.9□□□□□ -1.14
CHD1-203ENST00000505657 USP17L4A6NCW7 530 aa7.9□□□□□ -1.14
CHD1-203ENST00000505657 RNF225M0QZC1 329 aaPredicted RBP7.9□□□□□ -1.14
CHD1-203ENST00000505657 NCOA4Q13772 614 aa7.9□□□□□ -1.14
CHD1-203ENST00000505657 CFAP70Q5T0N1 1121 aa7.9□□□□□ -1.14
CHD1-203ENST00000505657 CC2D2BQ6DHV5 1058 aa7.9□□□□□ -1.14
CHD1-203ENST00000505657 USP17L2Q6R6M4 530 aa7.9□□□□□ -1.14
CHD1-203ENST00000505657 USP17L1Q7RTZ2 530 aa7.9□□□□□ -1.14
CHD1-203ENST00000505657 CCDC82Q8N4S0 544 aa7.9□□□□□ -1.14
CHD1-203ENST00000505657 KDF1Q8NAX2 398 aaPredicted RBP7.9□□□□□ -1.14
CHD1-203ENST00000505657 NANOS1Q8WY41 292 aaKnown RBP7.9□□□□□ -1.14
CHD1-203ENST00000505657 OSBPL3Q9H4L5 887 aa7.9□□□□□ -1.14
CHD1-203ENST00000505657 MAFBQ9Y5Q3 323 aaPredicted RBP7.9□□□□□ -1.14
CHD1-203ENST00000505657 MAP7D1Q3KQU3 841 aa7.89□□□□□ -1.15
CHD1-203ENST00000505657 CCDC125Q86Z20 511 aa7.89□□□□□ -1.15
CHD1-203ENST00000505657 SVOPQ8N4V2 548 aa7.89□□□□□ -1.15
CHD1-203ENST00000505657 CCDC155Q8N6L0 562 aa7.89□□□□□ -1.15
CHD1-203ENST00000505657 STAU1O95793 577 aaKnown RBP7.88□□□□□ -1.15
CHD1-203ENST00000505657 ADH1AP07327 375 aa7.88□□□□□ -1.15
CHD1-203ENST00000505657 IRS1P35568 1242 aa7.88□□□□□ -1.15
CHD1-203ENST00000505657 GPAT2Q6NUI2 795 aa7.88□□□□□ -1.15
CHD1-203ENST00000505657 RELBQ01201 579 aa7.87□□□□□ -1.15
CHD1-203ENST00000505657 PLEKHM2Q8IWE5 1019 aa7.87□□□□□ -1.15
CHD1-203ENST00000505657 VWA5B2Q8N398 1253 aa7.87□□□□□ -1.15
CHD1-203ENST00000505657 SLC35F4A4IF30 521 aa7.86□□□□□ -1.15
CHD1-203ENST00000505657 ARHGEF15O94989 841 aa7.86□□□□□ -1.15
CHD1-203ENST00000505657 LMOD1P29536 600 aaPredicted RBP7.86□□□□□ -1.15
CHD1-203ENST00000505657 EML3Q32P44 896 aa7.86□□□□□ -1.15
CHD1-203ENST00000505657 ZNF395Q9H8N7 513 aaPredicted RBP7.86□□□□□ -1.15
CHD1-203ENST00000505657 MYCP01106 439 aaPredicted RBP7.85□□□□□ -1.15
CHD1-203ENST00000505657 SLURP2P0DP57 97 aa7.85□□□□□ -1.15
CHD1-203ENST00000505657 RFX1P22670 979 aa7.85□□□□□ -1.15
CHD1-203ENST00000505657 CCDC97Q96F63 343 aaPredicted RBP7.85□□□□□ -1.15
CHD1-203ENST00000505657 ATP5J2-PTCD1G3V325 749 aa7.84□□□□□ -1.15
CHD1-203ENST00000505657 SPINT1O43278 529 aa7.84□□□□□ -1.15
CHD1-203ENST00000505657 USP4Q13107 963 aa7.84□□□□□ -1.15
CHD1-203ENST00000505657 RAB6BQ9NRW1 208 aa7.84□□□□□ -1.15
CHD1-203ENST00000505657 SERPINA10Q9UK55 444 aa7.84□□□□□ -1.15
CHD1-203ENST00000505657 KIAA1024Q9UPX6 916 aa7.84□□□□□ -1.15
CHD1-203ENST00000505657 PCDHGA11Q9Y5H2 935 aa7.84□□□□□ -1.15
CHD1-203ENST00000505657 DNMT3AQ9Y6K1 912 aaPredicted RBP7.84□□□□□ -1.15
CHD1-203ENST00000505657 CDC14CA4D256 554 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms