RNA–Protein interactions for RNA: ENST00000505526.1

PDCD6-203, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-203ENST00000505526 LTV1Q96GA3 475 aaPredicted RBP21.75■■□□□ 1.07
PDCD6-203ENST00000505526 TERF2IPQ9NYB0 399 aa21.75■■□□□ 1.07
PDCD6-203ENST00000505526 TFCP2L1Q9NZI6 479 aa21.75■■□□□ 1.07
PDCD6-203ENST00000505526 SLC24A1O60721 1099 aa21.73■■□□□ 1.07
PDCD6-203ENST00000505526 KCNQ4P56696 695 aa21.73■■□□□ 1.07
PDCD6-203ENST00000505526 TMF1P82094 1093 aa21.73■■□□□ 1.07
PDCD6-203ENST00000505526 PELP1Q8IZL8 1130 aaKnown RBP21.73■■□□□ 1.07
PDCD6-203ENST00000505526 SYTL4Q96C24 671 aaPredicted RBP21.73■■□□□ 1.07
PDCD6-203ENST00000505526 A0A1W2PP64 1363 aa21.73■■□□□ 1.07
PDCD6-203ENST00000505526 COL24A1Q17RW2 1714 aa21.72■■□□□ 1.07
PDCD6-203ENST00000505526 PRIM1P49642 420 aaKnown RBP21.72■■□□□ 1.07
PDCD6-203ENST00000505526 FAM208AQ9UK61 1670 aaKnown RBP21.71■■□□□ 1.07
PDCD6-203ENST00000505526 ANKRD36BQ8N2N9 1353 aa21.71■■□□□ 1.07
PDCD6-203ENST00000505526 GIGYF1O75420 1035 aaPredicted RBP21.69■■□□□ 1.06
PDCD6-203ENST00000505526 NLGN2Q8NFZ4 835 aa21.69■■□□□ 1.06
PDCD6-203ENST00000505526 TUBGCP6Q96RT7 1819 aa21.69■■□□□ 1.06
PDCD6-203ENST00000505526 PUS7Q96PZ0 661 aaKnown RBP21.68■■□□□ 1.06
PDCD6-203ENST00000505526 DOT1LQ8TEK3 1739 aa21.68■■□□□ 1.06
PDCD6-203ENST00000505526 NSD2O96028 1365 aa21.67■■□□□ 1.06
PDCD6-203ENST00000505526 KIF7Q2M1P5 1343 aa21.67■■□□□ 1.06
PDCD6-203ENST00000505526 MAP3K19Q56UN5 1328 aa21.67■■□□□ 1.06
PDCD6-203ENST00000505526 WASHC2AQ641Q2 1341 aa21.67■■□□□ 1.06
PDCD6-203ENST00000505526 HOXC9P31274 260 aa21.66■■□□□ 1.06
PDCD6-203ENST00000505526 ZCRB1Q8TBF4 217 aaKnown RBP21.66■■□□□ 1.06
PDCD6-203ENST00000505526 POLR3GLQ9BT43 218 aa21.66■■□□□ 1.06
PDCD6-203ENST00000505526 LY75O60449 1722 aa21.66■■□□□ 1.06
PDCD6-203ENST00000505526 AMPHP49418 695 aa21.65■■□□□ 1.06
PDCD6-203ENST00000505526 CDCA8Q53HL2 280 aa21.65■■□□□ 1.06
PDCD6-203ENST00000505526 COG3Q96JB2 828 aa21.65■■□□□ 1.06
PDCD6-203ENST00000505526 CCNL1Q9UK58 526 aaPredicted RBP21.65■■□□□ 1.06
PDCD6-203ENST00000505526 MSH5O43196 834 aa21.64■■□□□ 1.06
PDCD6-203ENST00000505526 FBLN1P23142 703 aa21.64■■□□□ 1.05
PDCD6-203ENST00000505526 MEGF6O75095 1541 aa21.63■■□□□ 1.05
PDCD6-203ENST00000505526 SHANK3Q9BYB0 1731 aa21.63■■□□□ 1.05
PDCD6-203ENST00000505526 GRIN3BO60391 1043 aa21.62■■□□□ 1.05
PDCD6-203ENST00000505526 YBX3P16989 372 aaKnown RBP eCLIP21.62■■□□□ 1.058e-11■□□□□ 8.3
PDCD6-203ENST00000505526 COL23A1Q86Y22 540 aaPredicted RBP21.62■■□□□ 1.05
PDCD6-203ENST00000505526 RGPD2P0DJD1 1756 aa21.61■■□□□ 1.05
PDCD6-203ENST00000505526 GOLGB1Q14789 3259 aaKnown RBP21.59■■□□□ 1.05
PDCD6-203ENST00000505526 NBPF6Q5VWK0 638 aa21.58■■□□□ 1.05
PDCD6-203ENST00000505526 NBPF4Q96M43 638 aa21.58■■□□□ 1.05
PDCD6-203ENST00000505526 MSL1Q68DK7 614 aa21.58■■□□□ 1.04
PDCD6-203ENST00000505526 RTL1A6NKG5 1358 aa21.57■■□□□ 1.04
PDCD6-203ENST00000505526 CGNL1Q0VF96 1302 aa21.57■■□□□ 1.04
PDCD6-203ENST00000505526 RRS1Q15050 365 aaKnown RBP21.56■■□□□ 1.04
PDCD6-203ENST00000505526 USHBP1Q8N6Y0 703 aa21.56■■□□□ 1.04
PDCD6-203ENST00000505526 RAPGEF4Q8WZA2 1011 aa21.55■■□□□ 1.04
PDCD6-203ENST00000505526 C5P01031 1676 aa21.53■■□□□ 1.04
PDCD6-203ENST00000505526 SMG6Q86US8 1419 aaKnown RBP21.52■■□□□ 1.04
PDCD6-203ENST00000505526 TATP17735 454 aaPredicted RBP21.52■■□□□ 1.04
PDCD6-203ENST00000505526 CD2APQ9Y5K6 639 aa21.52■■□□□ 1.04
PDCD6-203ENST00000505526 ATP10DQ9P241 1426 aa21.52■■□□□ 1.03
PDCD6-203ENST00000505526 HMGB2P26583 209 aaKnown RBP21.52■■□□□ 1.03
PDCD6-203ENST00000505526 DDX10Q13206 875 aaKnown RBP21.52■■□□□ 1.03
PDCD6-203ENST00000505526 FLAD1Q8NFF5 587 aa21.52■■□□□ 1.03
PDCD6-203ENST00000505526 FYB1O15117 783 aa21.51■■□□□ 1.03
PDCD6-203ENST00000505526 GGNBP2Q9H3C7 697 aa21.51■■□□□ 1.03
PDCD6-203ENST00000505526 PALLDQ8WX93 1383 aa21.51■■□□□ 1.03
PDCD6-203ENST00000505526 PCDH11XQ9BZA7 1347 aa21.5■■□□□ 1.03
PDCD6-203ENST00000505526 PCDH11YQ9BZA8 1340 aa21.5■■□□□ 1.03
PDCD6-203ENST00000505526 IFFO2Q5TF58 517 aa21.5■■□□□ 1.03
PDCD6-203ENST00000505526 MPRIPQ6WCQ1 1025 aa21.49■■□□□ 1.03
PDCD6-203ENST00000505526 INSRP06213 1382 aa21.47■■□□□ 1.03
PDCD6-203ENST00000505526 HSP90AB2PQ58FF8 381 aa21.47■■□□□ 1.03
PDCD6-203ENST00000505526 GPBP1L1Q9HC44 474 aaPredicted RBP21.46■■□□□ 1.03
PDCD6-203ENST00000505526 TAF1LQ8IZX4 1826 aa21.46■■□□□ 1.03
PDCD6-203ENST00000505526 PANK3Q9H999 370 aa21.45■■□□□ 1.03
PDCD6-203ENST00000505526 CEP350Q5VT06 3117 aa21.45■■□□□ 1.02
PDCD6-203ENST00000505526 CYP27B1O15528 508 aa21.45■■□□□ 1.02
PDCD6-203ENST00000505526 SMARCC1Q92922 1105 aaPredicted RBP21.45■■□□□ 1.02
PDCD6-203ENST00000505526 AK7Q96M32 723 aa21.45■■□□□ 1.02
PDCD6-203ENST00000505526 C4BP0C0L5 1744 aa21.44■■□□□ 1.02
PDCD6-203ENST00000505526 ADCY9O60503 1353 aa21.43■■□□□ 1.02
PDCD6-203ENST00000505526 FLT4P35916 1363 aa21.43■■□□□ 1.02
PDCD6-203ENST00000505526 AMIGO3Q86WK7 504 aa21.43■■□□□ 1.02
PDCD6-203ENST00000505526 PHF14O94880 888 aa21.42■■□□□ 1.02
PDCD6-203ENST00000505526 ZNF526Q8TF50 670 aaPredicted RBP21.42■■□□□ 1.02
PDCD6-203ENST00000505526 KIF24Q5T7B8 1368 aa21.42■■□□□ 1.02
PDCD6-203ENST00000505526 TOGARAM1Q9Y4F4 1720 aa21.42■■□□□ 1.02
PDCD6-203ENST00000505526 SMIM5Q71RC9 77 aa21.41■■□□□ 1.02
PDCD6-203ENST00000505526 PIGBQ92521 554 aa21.4■■□□□ 1.02
PDCD6-203ENST00000505526 IGSF1Q8N6C5 1336 aa21.4■■□□□ 1.02
PDCD6-203ENST00000505526 ITGB4P16144 1822 aa21.4■■□□□ 1.02
PDCD6-203ENST00000505526 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.39■■□□□ 1.02
PDCD6-203ENST00000505526 WWC3Q9ULE0 1092 aa21.39■■□□□ 1.02
PDCD6-203ENST00000505526 NSD3Q9BZ95 1437 aa21.39■■□□□ 1.02
PDCD6-203ENST00000505526 HSPA6P17066 643 aa21.39■■□□□ 1.01
PDCD6-203ENST00000505526 CARD14Q9BXL6 1004 aa21.39■■□□□ 1.01
PDCD6-203ENST00000505526 KIF20BQ96Q89 1820 aa21.38■■□□□ 1.01
PDCD6-203ENST00000505526 UBR3Q6ZT12 1888 aa21.38■■□□□ 1.01
PDCD6-203ENST00000505526 PKD1L3Q7Z443 1732 aa21.37■■□□□ 1.01
PDCD6-203ENST00000505526 SSFA2P28290 1259 aa21.37■■□□□ 1.01
PDCD6-203ENST00000505526 NKX1-1Q15270 411 aaPredicted RBP21.37■■□□□ 1.01
PDCD6-203ENST00000505526 EMILIN1Q9Y6C2 1016 aa21.37■■□□□ 1.01
PDCD6-203ENST00000505526 LOC102724428A0A0B4J2F2 783 aa21.36■■□□□ 1.01
PDCD6-203ENST00000505526 SIK1P57059 783 aa21.36■■□□□ 1.01
PDCD6-203ENST00000505526 LINC00116Q8NCU8 138 aa21.36■■□□□ 1.01
PDCD6-203ENST00000505526 SPG7Q9UQ90 795 aa21.36■■□□□ 1.01
PDCD6-203ENST00000505526 PER1O15534 1290 aaPredicted RBP21.34■■□□□ 1.01
PDCD6-203ENST00000505526 NCAPD2Q15021 1401 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms