RNA–Protein interactions for RNA: ENST00000505469.1

PPARGC1A-203, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 2

Gene PPARGC1A, Length 406 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-203ENST00000505469 ITGB4P16144 1822 aa11.97□□□□□ -0.49
PPARGC1A-203ENST00000505469 VIRMAQ69YN4 1812 aaKnown RBP11.97□□□□□ -0.49
PPARGC1A-203ENST00000505469 ANKRD24Q8TF21 1146 aa11.97□□□□□ -0.49
PPARGC1A-203ENST00000505469 CARD14Q9BXL6 1004 aa11.97□□□□□ -0.49
PPARGC1A-203ENST00000505469 LY75O60449 1722 aa11.97□□□□□ -0.49
PPARGC1A-203ENST00000505469 DOT1LQ8TEK3 1739 aa11.97□□□□□ -0.49
PPARGC1A-203ENST00000505469 ZBTB7CA1YPR0 619 aa11.96□□□□□ -0.49
PPARGC1A-203ENST00000505469 EXOC5O00471 708 aa11.96□□□□□ -0.49
PPARGC1A-203ENST00000505469 SOX12O15370 315 aa11.96□□□□□ -0.49
PPARGC1A-203ENST00000505469 IL2RBP14784 551 aa11.96□□□□□ -0.49
PPARGC1A-203ENST00000505469 AMPHP49418 695 aa11.96□□□□□ -0.49
PPARGC1A-203ENST00000505469 GGNBP2Q9H3C7 697 aa11.95□□□□□ -0.5
PPARGC1A-203ENST00000505469 NPC1L1Q9UHC9 1359 aa11.94□□□□□ -0.5
PPARGC1A-203ENST00000505469 PLSCR1O15162 318 aa11.94□□□□□ -0.5
PPARGC1A-203ENST00000505469 NLRP2Q9NX02 1062 aa11.94□□□□□ -0.5
PPARGC1A-203ENST00000505469 WASHC2AQ641Q2 1341 aa11.93□□□□□ -0.5
PPARGC1A-203ENST00000505469 BCL11BQ9C0K0 894 aaPredicted RBP11.93□□□□□ -0.5
PPARGC1A-203ENST00000505469 TAF1LQ8IZX4 1826 aa11.93□□□□□ -0.5
PPARGC1A-203ENST00000505469 CAMKK2Q96RR4 588 aa11.92□□□□□ -0.5
PPARGC1A-203ENST00000505469 KIF7Q2M1P5 1343 aa11.91□□□□□ -0.5
PPARGC1A-203ENST00000505469 TRIM37O94972 964 aa11.91□□□□□ -0.5
PPARGC1A-203ENST00000505469 HMGB2P26583 209 aaKnown RBP11.91□□□□□ -0.5
PPARGC1A-203ENST00000505469 MARCH10Q8NA82 808 aaPredicted RBP11.91□□□□□ -0.5
PPARGC1A-203ENST00000505469 ZNF831Q5JPB2 1677 aa11.91□□□□□ -0.5
PPARGC1A-203ENST00000505469 PAPPAQ13219 1627 aa11.9□□□□□ -0.5
PPARGC1A-203ENST00000505469 DEFB132Q7Z7B7 95 aa11.9□□□□□ -0.5
PPARGC1A-203ENST00000505469 PANK3Q9H999 370 aa11.9□□□□□ -0.5
PPARGC1A-203ENST00000505469 KNSTRNQ9Y448 316 aa11.9□□□□□ -0.5
PPARGC1A-203ENST00000505469 MEGF6O75095 1541 aa11.9□□□□□ -0.5
PPARGC1A-203ENST00000505469 CASZ1Q86V15 1759 aa11.9□□□□□ -0.51
PPARGC1A-203ENST00000505469 APBA3O96018 575 aa11.89□□□□□ -0.51
PPARGC1A-203ENST00000505469 RRS1Q15050 365 aaKnown RBP11.89□□□□□ -0.51
PPARGC1A-203ENST00000505469 FAM182BQ5T319 152 aa11.89□□□□□ -0.51
PPARGC1A-203ENST00000505469 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.89□□□□□ -0.51
PPARGC1A-203ENST00000505469 COL24A1Q17RW2 1714 aa11.89□□□□□ -0.51
PPARGC1A-203ENST00000505469 TOGARAM1Q9Y4F4 1720 aa11.89□□□□□ -0.51
PPARGC1A-203ENST00000505469 SCN11AQ9UI33 1791 aa11.88□□□□□ -0.51
PPARGC1A-203ENST00000505469 EN1Q05925 392 aaPredicted RBP11.88□□□□□ -0.51
PPARGC1A-203ENST00000505469 MKRN4PQ13434 485 aaPredicted RBP11.87□□□□□ -0.51
PPARGC1A-203ENST00000505469 HSP90AB2PQ58FF8 381 aa11.87□□□□□ -0.51
PPARGC1A-203ENST00000505469 RAPGEF4Q8WZA2 1011 aa11.87□□□□□ -0.51
PPARGC1A-203ENST00000505469 POLKQ9UBT6 870 aa11.87□□□□□ -0.51
PPARGC1A-203ENST00000505469 PCDH11XQ9BZA7 1347 aa11.86□□□□□ -0.51
PPARGC1A-203ENST00000505469 PCDH11YQ9BZA8 1340 aa11.86□□□□□ -0.51
PPARGC1A-203ENST00000505469 TUBGCP6Q96RT7 1819 aa11.86□□□□□ -0.51
PPARGC1A-203ENST00000505469 PER1O15534 1290 aaPredicted RBP11.86□□□□□ -0.51
PPARGC1A-203ENST00000505469 AMER1Q5JTC6 1135 aaPredicted RBP11.86□□□□□ -0.51
PPARGC1A-203ENST00000505469 NBPF6Q5VWK0 638 aa11.86□□□□□ -0.51
PPARGC1A-203ENST00000505469 ZCRB1Q8TBF4 217 aaKnown RBP11.86□□□□□ -0.51
PPARGC1A-203ENST00000505469 NBPF4Q96M43 638 aa11.86□□□□□ -0.51
PPARGC1A-203ENST00000505469 EMILIN1Q9Y6C2 1016 aa11.86□□□□□ -0.51
PPARGC1A-203ENST00000505469 C5P01031 1676 aa11.86□□□□□ -0.51
PPARGC1A-203ENST00000505469 TATP17735 454 aaPredicted RBP11.85□□□□□ -0.51
PPARGC1A-203ENST00000505469 EZH2Q15910 746 aaKnown RBP11.85□□□□□ -0.51
PPARGC1A-203ENST00000505469 NBPF14Q5TI25 921 aa11.85□□□□□ -0.51
PPARGC1A-203ENST00000505469 AKT1S1Q96B36 256 aa11.85□□□□□ -0.51
PPARGC1A-203ENST00000505469 IGSF1Q8N6C5 1336 aa11.85□□□□□ -0.51
PPARGC1A-203ENST00000505469 KDRP35968 1356 aa11.84□□□□□ -0.51
PPARGC1A-203ENST00000505469 LTV1Q96GA3 475 aaPredicted RBP11.84□□□□□ -0.51
PPARGC1A-203ENST00000505469 POLR3GLQ9BT43 218 aa11.84□□□□□ -0.51
PPARGC1A-203ENST00000505469 CICQ96RK0 1608 aaPredicted RBP11.84□□□□□ -0.51
PPARGC1A-203ENST00000505469 FBLN1P23142 703 aa11.83□□□□□ -0.52
PPARGC1A-203ENST00000505469 POTEHQ6S545 545 aa11.83□□□□□ -0.52
PPARGC1A-203ENST00000505469 MORC1Q86VD1 984 aa11.83□□□□□ -0.52
PPARGC1A-203ENST00000505469 ADAMTS7Q9UKP4 1686 aa11.82□□□□□ -0.52
PPARGC1A-203ENST00000505469 NKX1-1Q15270 411 aaPredicted RBP11.82□□□□□ -0.52
PPARGC1A-203ENST00000505469 UBR3Q6ZT12 1888 aa11.81□□□□□ -0.52
PPARGC1A-203ENST00000505469 SLC27A3Q5K4L6 730 aa11.81□□□□□ -0.52
PPARGC1A-203ENST00000505469 SPG7Q9UQ90 795 aa11.81□□□□□ -0.52
PPARGC1A-203ENST00000505469 EIF4A2Q14240 407 aaKnown RBP11.8□□□□□ -0.52
PPARGC1A-203ENST00000505469 EYA1Q99502 592 aa11.8□□□□□ -0.52
PPARGC1A-203ENST00000505469 COL5A3P25940 1745 aaPredicted RBP11.8□□□□□ -0.52
PPARGC1A-203ENST00000505469 PPM1GO15355 546 aaPredicted RBP11.79□□□□□ -0.52
PPARGC1A-203ENST00000505469 TXNRD1Q16881 649 aa11.79□□□□□ -0.52
PPARGC1A-203ENST00000505469 COL3A1P02461 1466 aaPredicted RBP11.78□□□□□ -0.52
PPARGC1A-203ENST00000505469 HSP90AB1P08238 724 aaKnown RBP11.78□□□□□ -0.52
PPARGC1A-203ENST00000505469 AMOTQ4VCS5 1084 aa11.78□□□□□ -0.52
PPARGC1A-203ENST00000505469 DDX54Q8TDD1 881 aaKnown RBP11.78□□□□□ -0.52
PPARGC1A-203ENST00000505469 SIPA1L3O60292 1781 aaPredicted RBP11.77□□□□□ -0.52
PPARGC1A-203ENST00000505469 KCNQ2O43526 872 aa11.77□□□□□ -0.53
PPARGC1A-203ENST00000505469 IFNL2Q8IZJ0 200 aa11.77□□□□□ -0.53
PPARGC1A-203ENST00000505469 PROM2Q8N271 834 aa11.77□□□□□ -0.53
PPARGC1A-203ENST00000505469 CYP27B1O15528 508 aa11.76□□□□□ -0.53
PPARGC1A-203ENST00000505469 R3HDM1Q15032 1099 aaKnown RBP11.76□□□□□ -0.53
PPARGC1A-203ENST00000505469 REM2Q8IYK8 340 aaPredicted RBP11.76□□□□□ -0.53
PPARGC1A-203ENST00000505469 USHBP1Q8N6Y0 703 aa11.76□□□□□ -0.53
PPARGC1A-203ENST00000505469 C4BP0C0L5 1744 aa11.76□□□□□ -0.53
PPARGC1A-203ENST00000505469 UBR2Q8IWV8 1755 aa11.76□□□□□ -0.53
PPARGC1A-203ENST00000505469 SPDYE2BA6NHP3 402 aa11.75□□□□□ -0.53
PPARGC1A-203ENST00000505469 SPDYE6P0CI01 402 aa11.75□□□□□ -0.53
PPARGC1A-203ENST00000505469 SPDYE2Q495Y8 402 aa11.75□□□□□ -0.53
PPARGC1A-203ENST00000505469 CHRDL2Q6WN34 429 aa11.75□□□□□ -0.53
PPARGC1A-203ENST00000505469 PTF1AQ7RTS3 328 aa11.75□□□□□ -0.53
PPARGC1A-203ENST00000505469 SMARCC1Q92922 1105 aaPredicted RBP11.75□□□□□ -0.53
PPARGC1A-203ENST00000505469 STK32BQ9NY57 414 aa11.75□□□□□ -0.53
PPARGC1A-203ENST00000505469 CHD4Q14839 1912 aa11.75□□□□□ -0.53
PPARGC1A-203ENST00000505469 DLG5Q8TDM6 1919 aa11.75□□□□□ -0.53
PPARGC1A-203ENST00000505469 MRC1P22897 1456 aa11.75□□□□□ -0.53
PPARGC1A-203ENST00000505469 IL13P35225 146 aa11.74□□□□□ -0.53
PPARGC1A-203ENST00000505469 TNNT2P45379 298 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms