RNA–Protein interactions for RNA: ENST00000505073.5

CCSER1-205, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-205ENST00000505073 PDE3AQ14432 1141 aa16.87■□□□□ 0.29
CCSER1-205ENST00000505073 CFAP44Q96MT7 982 aa16.87■□□□□ 0.29
CCSER1-205ENST00000505073 ZC3H6P61129 1189 aaKnown RBP16.86■□□□□ 0.29
CCSER1-205ENST00000505073 NBPF6Q5VWK0 638 aa16.86■□□□□ 0.29
CCSER1-205ENST00000505073 BRINP3Q76B58 766 aa16.86■□□□□ 0.29
CCSER1-205ENST00000505073 NBPF4Q96M43 638 aa16.86■□□□□ 0.29
CCSER1-205ENST00000505073 LRRC59Q96AG4 307 aaKnown RBP16.86■□□□□ 0.29
CCSER1-205ENST00000505073 COG6Q9Y2V7 657 aa16.86■□□□□ 0.29
CCSER1-205ENST00000505073 MED1Q15648 1581 aaPredicted RBP16.85■□□□□ 0.29
CCSER1-205ENST00000505073 NFKBIBQ15653 356 aa16.85■□□□□ 0.29
CCSER1-205ENST00000505073 TSPYL6Q8N831 410 aa16.85■□□□□ 0.29
CCSER1-205ENST00000505073 ELL2O00472 640 aaPredicted RBP16.85■□□□□ 0.29
CCSER1-205ENST00000505073 CABLES1Q8TDN4 633 aa16.85■□□□□ 0.29
CCSER1-205ENST00000505073 CLUAP1Q96AJ1 413 aa16.85■□□□□ 0.29
CCSER1-205ENST00000505073 RLBP1P12271 317 aa16.84■□□□□ 0.29
CCSER1-205ENST00000505073 SKAP1Q86WV1 359 aa16.84■□□□□ 0.29
CCSER1-205ENST00000505073 GAS2L2Q8NHY3 880 aa16.84■□□□□ 0.29
CCSER1-205ENST00000505073 SLAIN2Q9P270 581 aa16.84■□□□□ 0.29
CCSER1-205ENST00000505073 AXIN2Q9Y2T1 843 aa16.84■□□□□ 0.29
CCSER1-205ENST00000505073 PHRF1Q9P1Y6 1649 aaKnown RBP16.84■□□□□ 0.29
CCSER1-205ENST00000505073 PXDNQ92626 1479 aa16.83■□□□□ 0.29
CCSER1-205ENST00000505073 RGPD2P0DJD1 1756 aa16.83■□□□□ 0.29
CCSER1-205ENST00000505073 RTF1Q92541 710 aaKnown RBP16.83■□□□□ 0.28
CCSER1-205ENST00000505073 BRPF3Q9ULD4 1205 aa16.83■□□□□ 0.28
CCSER1-205ENST00000505073 KDM2BQ8NHM5 1336 aa16.83■□□□□ 0.28
CCSER1-205ENST00000505073 VAMP4O75379 141 aa16.83■□□□□ 0.28
CCSER1-205ENST00000505073 C8orf58Q8NAV2 365 aa16.83■□□□□ 0.28
CCSER1-205ENST00000505073 ANKRD24Q8TF21 1146 aa16.83■□□□□ 0.28
CCSER1-205ENST00000505073 TNS3Q68CZ2 1445 aa16.82■□□□□ 0.28
CCSER1-205ENST00000505073 ZKSCAN2Q63HK3 967 aa16.82■□□□□ 0.28
CCSER1-205ENST00000505073 SPATA31A3Q5VYP0 1347 aa16.82■□□□□ 0.28
CCSER1-205ENST00000505073 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.81■□□□□ 0.28
CCSER1-205ENST00000505073 NOB1Q9ULX3 412 aaKnown RBP16.81■□□□□ 0.28
CCSER1-205ENST00000505073 CRB1P82279 1406 aa16.81■□□□□ 0.28
CCSER1-205ENST00000505073 MIS18AQ9NYP9 233 aa16.81■□□□□ 0.28
CCSER1-205ENST00000505073 CHL1O00533 1208 aa16.8■□□□□ 0.28
CCSER1-205ENST00000505073 TWISTNBQ3B726 338 aaPredicted RBP16.8■□□□□ 0.28
CCSER1-205ENST00000505073 DAXXQ9UER7 740 aaPredicted RBP16.8■□□□□ 0.28
CCSER1-205ENST00000505073 KRT24Q2M2I5 525 aa16.8■□□□□ 0.28
CCSER1-205ENST00000505073 ALDH1L2Q3SY69 923 aa16.79■□□□□ 0.28
CCSER1-205ENST00000505073 CENPQQ7L2Z9 268 aaPredicted RBP16.79■□□□□ 0.28
CCSER1-205ENST00000505073 RGPD5Q99666 1765 aa16.79■□□□□ 0.28
CCSER1-205ENST00000505073 GNAT3A8MTJ3 354 aa16.79■□□□□ 0.28
CCSER1-205ENST00000505073 TRIM27P14373 513 aa16.78■□□□□ 0.28
CCSER1-205ENST00000505073 DZIP1LQ8IYY4 767 aaKnown RBP16.78■□□□□ 0.28
CCSER1-205ENST00000505073 FTSJ3Q8IY81 847 aaKnown RBP16.78■□□□□ 0.28
CCSER1-205ENST00000505073 VIRMAQ69YN4 1812 aaKnown RBP16.78■□□□□ 0.28
CCSER1-205ENST00000505073 CHRNA2Q15822 529 aa16.77■□□□□ 0.28
CCSER1-205ENST00000505073 MAP3K5Q99683 1374 aa16.77■□□□□ 0.27
CCSER1-205ENST00000505073 SLC4A3P48751 1232 aa16.77■□□□□ 0.27
CCSER1-205ENST00000505073 FAM161AQ3B820 660 aa16.77■□□□□ 0.27
CCSER1-205ENST00000505073 ATF7IPQ6VMQ6 1270 aa16.77■□□□□ 0.27
CCSER1-205ENST00000505073 ZNF428Q96B54 188 aa16.76■□□□□ 0.27
CCSER1-205ENST00000505073 KIF16BQ96L93 1317 aa16.76■□□□□ 0.27
CCSER1-205ENST00000505073 MRPL50Q8N5N7 158 aaKnown RBP16.76■□□□□ 0.27
CCSER1-205ENST00000505073 IL17REQ8NFR9 667 aa16.76■□□□□ 0.27
CCSER1-205ENST00000505073 TSPYL4Q9UJ04 414 aa16.76■□□□□ 0.27
CCSER1-205ENST00000505073 HTATSF1O43719 755 aaKnown RBP16.75■□□□□ 0.27
CCSER1-205ENST00000505073 ERBB3P21860 1342 aa16.75■□□□□ 0.27
CCSER1-205ENST00000505073 SOS2Q07890 1332 aaPredicted RBP16.75■□□□□ 0.27
CCSER1-205ENST00000505073 MVPQ14764 893 aaKnown RBP16.75■□□□□ 0.27
CCSER1-205ENST00000505073 C8orf34Q49A92 452 aa16.75■□□□□ 0.27
CCSER1-205ENST00000505073 IPO8O15397 1037 aaKnown RBP16.73■□□□□ 0.27
CCSER1-205ENST00000505073 KIAA0232Q92628 1395 aa16.73■□□□□ 0.27
CCSER1-205ENST00000505073 CRYBG1Q9Y4K1 1723 aa16.73■□□□□ 0.27
CCSER1-205ENST00000505073 NCAPD2Q15021 1401 aa16.73■□□□□ 0.27
CCSER1-205ENST00000505073 BRPF1P55201 1214 aaPredicted RBP16.73■□□□□ 0.27
CCSER1-205ENST00000505073 NLRP2Q9NX02 1062 aa16.73■□□□□ 0.27
CCSER1-205ENST00000505073 COL18A1P39060 1754 aa16.72■□□□□ 0.27
CCSER1-205ENST00000505073 ZNF530Q6P9A1 599 aaPredicted RBP16.72■□□□□ 0.27
CCSER1-205ENST00000505073 ITPRIPQ8IWB1 547 aa16.72■□□□□ 0.27
CCSER1-205ENST00000505073 TMEM57Q8N5G2 664 aa16.72■□□□□ 0.27
CCSER1-205ENST00000505073 PLEKHO1Q53GL0 409 aaPredicted RBP16.72■□□□□ 0.27
CCSER1-205ENST00000505073 LRRC37A3O60309 1634 aa16.71■□□□□ 0.27
CCSER1-205ENST00000505073 IGHDP01880 384 aa16.71■□□□□ 0.27
CCSER1-205ENST00000505073 LGR6Q9HBX8 967 aa16.71■□□□□ 0.27
CCSER1-205ENST00000505073 CSB-PGBD3P0DP91 1061 aa16.71■□□□□ 0.26
CCSER1-205ENST00000505073 PCDHB15Q9Y5E8 787 aa16.7■□□□□ 0.26
CCSER1-205ENST00000505073 CAMTA1Q9Y6Y1 1673 aa16.7■□□□□ 0.26
CCSER1-205ENST00000505073 TAF7Q15545 349 aaPredicted RBP16.69■□□□□ 0.26
CCSER1-205ENST00000505073 AMOTQ4VCS5 1084 aa16.69■□□□□ 0.26
CCSER1-205ENST00000505073 CPDO75976 1380 aa16.68■□□□□ 0.26
CCSER1-205ENST00000505073 HAP1P54257 671 aaPredicted RBP16.68■□□□□ 0.26
CCSER1-205ENST00000505073 AKAP4Q5JQC9 854 aa16.68■□□□□ 0.26
CCSER1-205ENST00000505073 MPRIPQ6WCQ1 1025 aa16.68■□□□□ 0.26
CCSER1-205ENST00000505073 FRAT2O75474 233 aaPredicted RBP16.68■□□□□ 0.26
CCSER1-205ENST00000505073 PRDM11Q9NQV5 511 aa16.67■□□□□ 0.26
CCSER1-205ENST00000505073 DDX19BQ9UMR2 479 aa16.67■□□□□ 0.26
CCSER1-205ENST00000505073 LMO7Q8WWI1 1683 aa16.67■□□□□ 0.26
CCSER1-205ENST00000505073 CEMIPQ8WUJ3 1361 aa16.67■□□□□ 0.26
CCSER1-205ENST00000505073 C1orf141Q5JVX7 400 aa16.67■□□□□ 0.26
CCSER1-205ENST00000505073 ARHGAP45Q92619 1136 aa16.67■□□□□ 0.26
CCSER1-205ENST00000505073 AAMPQ13685 434 aa16.66■□□□□ 0.26
CCSER1-205ENST00000505073 NHSL1Q5SYE7 1610 aa16.66■□□□□ 0.26
CCSER1-205ENST00000505073 RAPGEF4Q8WZA2 1011 aa16.66■□□□□ 0.26
CCSER1-205ENST00000505073 UBE2Q2Q8WVN8 375 aa16.64■□□□□ 0.26
CCSER1-205ENST00000505073 FAM208AQ9UK61 1670 aaKnown RBP16.64■□□□□ 0.25
CCSER1-205ENST00000505073 RNMTO43148 476 aaKnown RBP16.64■□□□□ 0.25
CCSER1-205ENST00000505073 TATP17735 454 aaPredicted RBP16.63■□□□□ 0.25
CCSER1-205ENST00000505073 TEFQ10587 303 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms