RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 AKT1S1Q96B36 256 aa18.48■□□□□ 0.55
DDX41-204ENST00000504807 PNPLA7Q6ZV29 1317 aa18.48■□□□□ 0.55
DDX41-204ENST00000504807 TNS2Q63HR2 1409 aa18.47■□□□□ 0.55
DDX41-204ENST00000504807 ADCY9O60503 1353 aa18.46■□□□□ 0.55
DDX41-204ENST00000504807 CCDC7Q96M83 1385 aa18.46■□□□□ 0.55
DDX41-204ENST00000504807 APLP1P51693 650 aa18.46■□□□□ 0.55
DDX41-204ENST00000504807 MAP3K19Q56UN5 1328 aa18.46■□□□□ 0.55
DDX41-204ENST00000504807 DNAJC5GQ8N7S2 189 aa18.45■□□□□ 0.54
DDX41-204ENST00000504807 CARD14Q9BXL6 1004 aa18.45■□□□□ 0.54
DDX41-204ENST00000504807 NLRP2Q9NX02 1062 aa18.45■□□□□ 0.54
DDX41-204ENST00000504807 TFCP2L1Q9NZI6 479 aa18.45■□□□□ 0.54
DDX41-204ENST00000504807 FAM208AQ9UK61 1670 aaKnown RBP18.44■□□□□ 0.54
DDX41-204ENST00000504807 FYB1O15117 783 aa18.44■□□□□ 0.54
DDX41-204ENST00000504807 TMF1P82094 1093 aa18.44■□□□□ 0.54
DDX41-204ENST00000504807 GGNBP2Q9H3C7 697 aa18.44■□□□□ 0.54
DDX41-204ENST00000504807 NHSQ6T4R5 1651 aa18.44■□□□□ 0.54
DDX41-204ENST00000504807 RGPD2P0DJD1 1756 aa18.43■□□□□ 0.54
DDX41-204ENST00000504807 KIF3CO14782 793 aa18.43■□□□□ 0.54
DDX41-204ENST00000504807 IP6K1Q92551 441 aa18.43■□□□□ 0.54
DDX41-204ENST00000504807 KCNQ4P56696 695 aa18.42■□□□□ 0.54
DDX41-204ENST00000504807 LTV1Q96GA3 475 aaPredicted RBP18.42■□□□□ 0.54
DDX41-204ENST00000504807 HOXC9P31274 260 aa18.41■□□□□ 0.54
DDX41-204ENST00000504807 RRS1Q15050 365 aaKnown RBP18.41■□□□□ 0.54
DDX41-204ENST00000504807 COG3Q96JB2 828 aa18.41■□□□□ 0.54
DDX41-204ENST00000504807 CLSPNQ9HAW4 1339 aa18.41■□□□□ 0.54
DDX41-204ENST00000504807 KIF20BQ96Q89 1820 aa18.4■□□□□ 0.54
DDX41-204ENST00000504807 MSH5O43196 834 aa18.4■□□□□ 0.54
DDX41-204ENST00000504807 PRELPP51888 382 aa18.4■□□□□ 0.54
DDX41-204ENST00000504807 TNS4Q8IZW8 715 aa18.4■□□□□ 0.54
DDX41-204ENST00000504807 IL2RBP14784 551 aa18.39■□□□□ 0.53
DDX41-204ENST00000504807 MSL1Q68DK7 614 aa18.39■□□□□ 0.53
DDX41-204ENST00000504807 TIMELESSQ9UNS1 1208 aa18.39■□□□□ 0.53
DDX41-204ENST00000504807 SLC27A3Q5K4L6 730 aa18.38■□□□□ 0.53
DDX41-204ENST00000504807 WWC3Q9ULE0 1092 aa18.38■□□□□ 0.53
DDX41-204ENST00000504807 MEGF6O75095 1541 aa18.38■□□□□ 0.53
DDX41-204ENST00000504807 NSD3Q9BZ95 1437 aa18.37■□□□□ 0.53
DDX41-204ENST00000504807 COL24A1Q17RW2 1714 aa18.37■□□□□ 0.53
DDX41-204ENST00000504807 BTAF1O14981 1849 aa18.36■□□□□ 0.53
DDX41-204ENST00000504807 SLC24A1O60721 1099 aa18.35■□□□□ 0.53
DDX41-204ENST00000504807 NBPF6Q5VWK0 638 aa18.34■□□□□ 0.53
DDX41-204ENST00000504807 USHBP1Q8N6Y0 703 aa18.34■□□□□ 0.53
DDX41-204ENST00000504807 NBPF4Q96M43 638 aa18.34■□□□□ 0.53
DDX41-204ENST00000504807 RTL1A6NKG5 1358 aa18.33■□□□□ 0.53
DDX41-204ENST00000504807 AMPHP49418 695 aa18.33■□□□□ 0.52
DDX41-204ENST00000504807 HTRA3P83110 453 aa18.33■□□□□ 0.52
DDX41-204ENST00000504807 HSP90AB2PQ58FF8 381 aa18.33■□□□□ 0.52
DDX41-204ENST00000504807 HSPA5P11021 654 aaKnown RBP18.32■□□□□ 0.52
DDX41-204ENST00000504807 COL23A1Q86Y22 540 aaPredicted RBP18.32■□□□□ 0.52
DDX41-204ENST00000504807 CD2APQ9Y5K6 639 aa18.32■□□□□ 0.52
DDX41-204ENST00000504807 QSER1Q2KHR3 1735 aa18.32■□□□□ 0.52
DDX41-204ENST00000504807 TOMM70O94826 608 aa18.31■□□□□ 0.52
DDX41-204ENST00000504807 CCER1Q8TC90 406 aaPredicted RBP18.31■□□□□ 0.52
DDX41-204ENST00000504807 EMILIN1Q9Y6C2 1016 aa18.31■□□□□ 0.52
DDX41-204ENST00000504807 DOT1LQ8TEK3 1739 aa18.3■□□□□ 0.52
DDX41-204ENST00000504807 DDX54Q8TDD1 881 aaKnown RBP18.3■□□□□ 0.52
DDX41-204ENST00000504807 SYTL4Q96C24 671 aaPredicted RBP18.3■□□□□ 0.52
DDX41-204ENST00000504807 KLRG1Q96E93 195 aa18.3■□□□□ 0.52
DDX41-204ENST00000504807 NSD2O96028 1365 aa18.3■□□□□ 0.52
DDX41-204ENST00000504807 ANKRD26Q9UPS8 1709 aa18.29■□□□□ 0.52
DDX41-204ENST00000504807 TUBGCP6Q96RT7 1819 aa18.29■□□□□ 0.52
DDX41-204ENST00000504807 CDCA8Q53HL2 280 aa18.29■□□□□ 0.52
DDX41-204ENST00000504807 INSRP06213 1382 aa18.28■□□□□ 0.52
DDX41-204ENST00000504807 PCNTO95613 3336 aa18.28■□□□□ 0.52
DDX41-204ENST00000504807 JMYQ8N9B5 988 aa18.27■□□□□ 0.52
DDX41-204ENST00000504807 IGSF1Q8N6C5 1336 aa18.26■□□□□ 0.51
DDX41-204ENST00000504807 SLC34A2O95436 690 aa18.26■□□□□ 0.51
DDX41-204ENST00000504807 POLR3GLQ9BT43 218 aa18.26■□□□□ 0.51
DDX41-204ENST00000504807 CCNL1Q9UK58 526 aaPredicted RBP18.26■□□□□ 0.51
DDX41-204ENST00000504807 FLT4P35916 1363 aa18.26■□□□□ 0.51
DDX41-204ENST00000504807 KAT6BQ8WYB5 2073 aa18.26■□□□□ 0.51
DDX41-204ENST00000504807 PRIM1P49642 420 aaKnown RBP18.24■□□□□ 0.51
DDX41-204ENST00000504807 ZCRB1Q8TBF4 217 aaKnown RBP18.24■□□□□ 0.51
DDX41-204ENST00000504807 NCAPD2Q15021 1401 aa18.23■□□□□ 0.51
DDX41-204ENST00000504807 EIF4G2P78344 907 aaKnown RBP eCLIP18.23■□□□□ 0.51
DDX41-204ENST00000504807 NMRK2Q9NPI5 230 aa18.23■□□□□ 0.51
DDX41-204ENST00000504807 POLKQ9UBT6 870 aa18.22■□□□□ 0.51
DDX41-204ENST00000504807 TOGARAM1Q9Y4F4 1720 aa18.22■□□□□ 0.51
DDX41-204ENST00000504807 KIF24Q5T7B8 1368 aa18.21■□□□□ 0.51
DDX41-204ENST00000504807 WDR90Q96KV7 1748 aa18.2■□□□□ 0.5
DDX41-204ENST00000504807 PANK3Q9H999 370 aa18.2■□□□□ 0.5
DDX41-204ENST00000504807 SMG6Q86US8 1419 aaKnown RBP18.2■□□□□ 0.5
DDX41-204ENST00000504807 LY75O60449 1722 aa18.2■□□□□ 0.5
DDX41-204ENST00000504807 CGNL1Q0VF96 1302 aa18.2■□□□□ 0.5
DDX41-204ENST00000504807 MAP2P11137 1827 aaKnown RBP18.19■□□□□ 0.5
DDX41-204ENST00000504807 PPM1GO15355 546 aaPredicted RBP18.19■□□□□ 0.5
DDX41-204ENST00000504807 TNNT2P45379 298 aaPredicted RBP18.19■□□□□ 0.5
DDX41-204ENST00000504807 PKD1L3Q7Z443 1732 aa18.19■□□□□ 0.5
DDX41-204ENST00000504807 CYP27B1O15528 508 aa18.18■□□□□ 0.5
DDX41-204ENST00000504807 RBM46Q8TBY0 533 aaKnown RBP18.18■□□□□ 0.5
DDX41-204ENST00000504807 WASHC2AQ641Q2 1341 aa18.18■□□□□ 0.5
DDX41-204ENST00000504807 C16orf71Q8IYS4 520 aaPredicted RBP18.17■□□□□ 0.5
DDX41-204ENST00000504807 EYA1Q99502 592 aa18.17■□□□□ 0.5
DDX41-204ENST00000504807 RAPGEF4Q8WZA2 1011 aa18.16■□□□□ 0.5
DDX41-204ENST00000504807 TATP17735 454 aaPredicted RBP18.15■□□□□ 0.5
DDX41-204ENST00000504807 HSPA1AP0DMV8 641 aaKnown RBP18.14■□□□□ 0.49
DDX41-204ENST00000504807 HSPA1BP0DMV9 641 aaKnown RBP18.14■□□□□ 0.49
DDX41-204ENST00000504807 EIF4A2Q14240 407 aaKnown RBP18.14■□□□□ 0.49
DDX41-204ENST00000504807 FSTL1Q12841 308 aa18.12■□□□□ 0.49
DDX41-204ENST00000504807 FLAD1Q8NFF5 587 aa18.12■□□□□ 0.49
DDX41-204ENST00000504807 KIF7Q2M1P5 1343 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms