RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 PER1O15534 1290 aaPredicted RBP11.81□□□□□ -0.52
CASC9-201ENST00000504531 ATP6V1AP38606 617 aa11.81□□□□□ -0.52
CASC9-201ENST00000504531 USP46P62068 366 aa11.81□□□□□ -0.52
CASC9-201ENST00000504531 CDCA8Q53HL2 280 aa11.81□□□□□ -0.52
CASC9-201ENST00000504531 TMC1Q8TDI8 760 aa11.81□□□□□ -0.52
CASC9-201ENST00000504531 SPAG9O60271 1321 aaKnown RBP11.81□□□□□ -0.52
CASC9-201ENST00000504531 KANK1Q14678 1352 aa11.8□□□□□ -0.52
CASC9-201ENST00000504531 TRAPPC8Q9Y2L5 1435 aa11.8□□□□□ -0.52
CASC9-201ENST00000504531 KDM4AO75164 1064 aa11.8□□□□□ -0.52
CASC9-201ENST00000504531 NR1I2O75469 434 aa11.8□□□□□ -0.52
CASC9-201ENST00000504531 COPS2P61201 443 aa11.8□□□□□ -0.52
CASC9-201ENST00000504531 TESK2Q96S53 571 aa11.8□□□□□ -0.52
CASC9-201ENST00000504531 CEP152O94986 1710 aa11.8□□□□□ -0.52
CASC9-201ENST00000504531 TMF1P82094 1093 aa11.79□□□□□ -0.52
CASC9-201ENST00000504531 FUT2Q10981 343 aa11.79□□□□□ -0.52
CASC9-201ENST00000504531 ZNF326Q5BKZ1 582 aaKnown RBP11.79□□□□□ -0.52
CASC9-201ENST00000504531 BLOC1S3Q6QNY0 202 aa11.79□□□□□ -0.52
CASC9-201ENST00000504531 NUTM1Q86Y26 1132 aa11.79□□□□□ -0.52
CASC9-201ENST00000504531 LMTK2Q8IWU2 1503 aa11.79□□□□□ -0.52
CASC9-201ENST00000504531 NPC1L1Q9UHC9 1359 aa11.79□□□□□ -0.52
CASC9-201ENST00000504531 SPHKAPQ2M3C7 1700 aa11.77□□□□□ -0.52
CASC9-201ENST00000504531 ATP7AQ04656 1500 aa11.77□□□□□ -0.52
CASC9-201ENST00000504531 ZPR1O75312 459 aa11.77□□□□□ -0.53
CASC9-201ENST00000504531 DIXDC1Q155Q3 683 aa11.77□□□□□ -0.53
CASC9-201ENST00000504531 FANCIQ9NVI1 1328 aa11.77□□□□□ -0.53
CASC9-201ENST00000504531 MADDQ8WXG6 1647 aa11.76□□□□□ -0.53
CASC9-201ENST00000504531 IQGAP1P46940 1657 aa11.76□□□□□ -0.53
CASC9-201ENST00000504531 MS4A1P11836 297 aa11.76□□□□□ -0.53
CASC9-201ENST00000504531 ILDR2Q71H61 639 aa11.76□□□□□ -0.53
CASC9-201ENST00000504531 BEGAINQ9BUH8 593 aa11.76□□□□□ -0.53
CASC9-201ENST00000504531 RBM19Q9Y4C8 960 aaKnown RBP11.76□□□□□ -0.53
CASC9-201ENST00000504531 POGZQ7Z3K3 1410 aa11.76□□□□□ -0.53
CASC9-201ENST00000504531 FANCAO15360 1455 aa11.76□□□□□ -0.53
CASC9-201ENST00000504531 CFAP74Q9C0B2 1584 aa11.75□□□□□ -0.53
CASC9-201ENST00000504531 SOCS7O14512 581 aa11.75□□□□□ -0.53
CASC9-201ENST00000504531 PUS10Q3MIT2 529 aaKnown RBP11.75□□□□□ -0.53
CASC9-201ENST00000504531 MORN1Q5T089 497 aa11.75□□□□□ -0.53
CASC9-201ENST00000504531 MYOM2P54296 1465 aa11.75□□□□□ -0.53
CASC9-201ENST00000504531 NEO1Q92859 1461 aa11.75□□□□□ -0.53
CASC9-201ENST00000504531 SCAF11Q99590 1463 aaKnown RBP11.75□□□□□ -0.53
CASC9-201ENST00000504531 CEBPAP49715 358 aaPredicted RBP11.74□□□□□ -0.53
CASC9-201ENST00000504531 ADAMTSL3P82987 1691 aa11.73□□□□□ -0.53
CASC9-201ENST00000504531 EIF3AQ14152 1382 aaKnown RBP11.73□□□□□ -0.53
CASC9-201ENST00000504531 NBPF1Q3BBV0 1214 aa11.73□□□□□ -0.53
CASC9-201ENST00000504531 ZNF516Q92618 1163 aa11.73□□□□□ -0.53
CASC9-201ENST00000504531 SYNMO15061 1565 aa11.72□□□□□ -0.53
CASC9-201ENST00000504531 SBNO2Q9Y2G9 1366 aa11.72□□□□□ -0.53
CASC9-201ENST00000504531 HOXA2O43364 376 aa11.72□□□□□ -0.53
CASC9-201ENST00000504531 SCUBE3Q8IX30 993 aa11.72□□□□□ -0.53
CASC9-201ENST00000504531 KDM4CQ9H3R0 1056 aa11.72□□□□□ -0.53
CASC9-201ENST00000504531 ZNF518AQ6AHZ1 1483 aa11.71□□□□□ -0.53
CASC9-201ENST00000504531 BLMP54132 1417 aaPredicted RBP11.71□□□□□ -0.53
CASC9-201ENST00000504531 NGEFQ8N5V2 710 aa11.71□□□□□ -0.53
CASC9-201ENST00000504531 SPIRE2Q8WWL2 714 aa11.71□□□□□ -0.53
CASC9-201ENST00000504531 MLH3Q9UHC1 1453 aa11.7□□□□□ -0.54
CASC9-201ENST00000504531 NRXN1Q9ULB1 1477 aa11.7□□□□□ -0.54
CASC9-201ENST00000504531 Q3C1V9 767 aa11.7□□□□□ -0.54
CASC9-201ENST00000504531 RGL3Q3MIN7 710 aa11.7□□□□□ -0.54
CASC9-201ENST00000504531 ESF1Q9H501 851 aaKnown RBP11.7□□□□□ -0.54
CASC9-201ENST00000504531 GPBP1L1Q9HC44 474 aaPredicted RBP11.7□□□□□ -0.54
CASC9-201ENST00000504531 SLC27A5Q9Y2P5 690 aa11.7□□□□□ -0.54
CASC9-201ENST00000504531 SALL2Q9Y467 1007 aaPredicted RBP11.7□□□□□ -0.54
CASC9-201ENST00000504531 CLTCL1P53675 1640 aa11.7□□□□□ -0.54
CASC9-201ENST00000504531 MROH1Q8NDA8 1641 aa11.7□□□□□ -0.54
CASC9-201ENST00000504531 A0A0G2JS52 829 aa11.69□□□□□ -0.54
CASC9-201ENST00000504531 PRKCSHP14314 528 aaPredicted RBP11.69□□□□□ -0.54
CASC9-201ENST00000504531 NEUROD2Q15784 382 aa11.69□□□□□ -0.54
CASC9-201ENST00000504531 AFAP1Q8N556 730 aa11.69□□□□□ -0.54
CASC9-201ENST00000504531 PUS7Q96PZ0 661 aaKnown RBP11.69□□□□□ -0.54
CASC9-201ENST00000504531 ANP32EQ9BTT0 268 aa11.69□□□□□ -0.54
CASC9-201ENST00000504531 EFCAB6Q5THR3 1501 aa11.69□□□□□ -0.54
CASC9-201ENST00000504531 RPGRIP1LQ68CZ1 1315 aa11.68□□□□□ -0.54
CASC9-201ENST00000504531 SETBP1Q9Y6X0 1596 aa11.68□□□□□ -0.54
CASC9-201ENST00000504531 FMNL1O95466 1100 aaPredicted RBP11.68□□□□□ -0.54
CASC9-201ENST00000504531 DDRGK1Q96HY6 314 aa11.68□□□□□ -0.54
CASC9-201ENST00000504531 ADH1BP00325 375 aa11.67□□□□□ -0.54
CASC9-201ENST00000504531 GGCXP38435 758 aa11.67□□□□□ -0.54
CASC9-201ENST00000504531 POLR3GLQ9BT43 218 aa11.67□□□□□ -0.54
CASC9-201ENST00000504531 TBC1D2Q9BYX2 928 aa11.67□□□□□ -0.54
CASC9-201ENST00000504531 PANK3Q9H999 370 aa11.67□□□□□ -0.54
CASC9-201ENST00000504531 PIK3C2GO75747 1445 aa11.67□□□□□ -0.54
CASC9-201ENST00000504531 MYO3AQ8NEV4 1616 aa11.67□□□□□ -0.54
CASC9-201ENST00000504531 KIF1BO60333 1816 aa11.67□□□□□ -0.54
CASC9-201ENST00000504531 KIDINS220Q9ULH0 1771 aa11.67□□□□□ -0.54
CASC9-201ENST00000504531 IFT172Q9UG01 1749 aa11.66□□□□□ -0.54
CASC9-201ENST00000504531 RIMS1Q86UR5 1692 aaKnown RBP11.66□□□□□ -0.54
CASC9-201ENST00000504531 GJA5P36382 358 aa11.66□□□□□ -0.54
CASC9-201ENST00000504531 TLL1O43897 1013 aa11.65□□□□□ -0.54
CASC9-201ENST00000504531 NKX2-3Q8TAU0 364 aa11.65□□□□□ -0.54
CASC9-201ENST00000504531 SPSB2Q99619 263 aa11.65□□□□□ -0.54
CASC9-201ENST00000504531 RSPH6AQ9H0K4 717 aa11.65□□□□□ -0.54
CASC9-201ENST00000504531 YEATS2Q9ULM3 1422 aa11.65□□□□□ -0.54
CASC9-201ENST00000504531 ASXL1Q8IXJ9 1541 aa11.65□□□□□ -0.55
CASC9-201ENST00000504531 FDX1P10109 184 aa11.64□□□□□ -0.55
CASC9-201ENST00000504531 BRICD5Q6PL45 260 aa11.64□□□□□ -0.55
CASC9-201ENST00000504531 THAP11Q96EK4 314 aa11.64□□□□□ -0.55
CASC9-201ENST00000504531 KNSTRNQ9Y448 316 aa11.64□□□□□ -0.55
CASC9-201ENST00000504531 MOXD2PA6NHM9 499 aa11.63□□□□□ -0.55
CASC9-201ENST00000504531 KIF3BO15066 747 aa11.63□□□□□ -0.55
CASC9-201ENST00000504531 BRPF1P55201 1214 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms