RNA–Protein interactions for RNA: ENST00000504484.5

APBB2-209, Transcript of amyloid beta precursor protein binding family B member 2, human

TSL 3

Gene APBB2, Length 2,091 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB2-209	ENST00000504484	CHL1	O00533	1208 aa		11.23	□□□□□ -0.61
APBB2-209	ENST00000504484	SOX12	O15370	315 aa		11.23	□□□□□ -0.61
APBB2-209	ENST00000504484	KIF2C	Q99661	725 aa		11.23	□□□□□ -0.61
APBB2-209	ENST00000504484	API5	Q9BZZ5	524 aa	Known RBP	11.23	□□□□□ -0.61
APBB2-209	ENST00000504484	SETD1B	Q9UPS6	1966 aa	Known RBP	11.23	□□□□□ -0.61
APBB2-209	ENST00000504484	AMOTL2	Q9Y2J4	779 aa		11.23	□□□□□ -0.61
APBB2-209	ENST00000504484	CACNA1F	O60840	1977 aa		11.23	□□□□□ -0.61
APBB2-209	ENST00000504484	USP54	Q70EL1	1684 aa		11.23	□□□□□ -0.61
APBB2-209	ENST00000504484	KIF24	Q5T7B8	1368 aa		11.22	□□□□□ -0.61
APBB2-209	ENST00000504484	N4BP2	Q86UW6	1770 aa	Predicted RBP	11.22	□□□□□ -0.61
APBB2-209	ENST00000504484	MAP3K19	Q56UN5	1328 aa		11.22	□□□□□ -0.61
APBB2-209	ENST00000504484	FOXO3	O43524	673 aa		11.22	□□□□□ -0.61
APBB2-209	ENST00000504484	MSH6	P52701	1360 aa		11.22	□□□□□ -0.61
APBB2-209	ENST00000504484	INTS3	Q68E01	1043 aa	Known RBP	11.21	□□□□□ -0.61
APBB2-209	ENST00000504484	TBC1D9	Q6ZT07	1266 aa		11.21	□□□□□ -0.61
APBB2-209	ENST00000504484	LTN1	O94822	1766 aa		11.21	□□□□□ -0.61
APBB2-209	ENST00000504484	GSPT1	P15170	499 aa	Known RBP	11.21	□□□□□ -0.62
APBB2-209	ENST00000504484	TRH	P20396	242 aa	Predicted RBP	11.21	□□□□□ -0.62
APBB2-209	ENST00000504484	CHMP4B	Q9H444	224 aa	Known RBP	11.21	□□□□□ -0.62
APBB2-209	ENST00000504484	MIS18A	Q9NYP9	233 aa		11.21	□□□□□ -0.62
APBB2-209	ENST00000504484	ARHGEF10	O15013	1369 aa		11.21	□□□□□ -0.62
APBB2-209	ENST00000504484	KIAA0232	Q92628	1395 aa		11.21	□□□□□ -0.62
APBB2-209	ENST00000504484	NWD1	Q149M9	1564 aa		11.2	□□□□□ -0.62
APBB2-209	ENST00000504484	CD2BP2	O95400	341 aa	Known RBP	11.2	□□□□□ -0.62
APBB2-209	ENST00000504484	DDIT3	P35638	169 aa		11.2	□□□□□ -0.62
APBB2-209	ENST00000504484	RGPD2	P0DJD1	1756 aa		11.2	□□□□□ -0.62
APBB2-209	ENST00000504484	MTHFSD	Q2M296	383 aa	Known RBP	11.2	□□□□□ -0.62
APBB2-209	ENST00000504484	PLEKHM2	Q8IWE5	1019 aa		11.2	□□□□□ -0.62
APBB2-209	ENST00000504484	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.2	□□□□□ -0.62
APBB2-209	ENST00000504484	DCTPP1	Q9H773	170 aa		11.2	□□□□□ -0.62
APBB2-209	ENST00000504484	RTL1	A6NKG5	1358 aa		11.19	□□□□□ -0.62
APBB2-209	ENST00000504484	MCM4	P33991	863 aa		11.19	□□□□□ -0.62
APBB2-209	ENST00000504484	HSCB	Q8IWL3	235 aa		11.19	□□□□□ -0.62
APBB2-209	ENST00000504484	SNX21	Q969T3	373 aa		11.19	□□□□□ -0.62
APBB2-209	ENST00000504484	CHMP5	Q9NZZ3	219 aa		11.19	□□□□□ -0.62
APBB2-209	ENST00000504484	TTC21A	Q8NDW8	1320 aa		11.19	□□□□□ -0.62
APBB2-209	ENST00000504484	SBNO1	A3KN83	1393 aa		11.18	□□□□□ -0.62
APBB2-209	ENST00000504484	KDR	P35968	1356 aa		11.18	□□□□□ -0.62
APBB2-209	ENST00000504484	PLPPR3	Q6T4P5	718 aa		11.18	□□□□□ -0.62
APBB2-209	ENST00000504484	G2E3	Q7L622	706 aa		11.18	□□□□□ -0.62
APBB2-209	ENST00000504484	ANKRD44	Q8N8A2	993 aa		11.18	□□□□□ -0.62
APBB2-209	ENST00000504484	OTUD7A	Q8TE49	926 aa	Predicted RBP	11.18	□□□□□ -0.62
APBB2-209	ENST00000504484	FLT4	P35916	1363 aa		11.18	□□□□□ -0.62
APBB2-209	ENST00000504484	CEP85	Q6P2H3	762 aa		11.18	□□□□□ -0.62
APBB2-209	ENST00000504484	MEIS3	Q99687	375 aa		11.18	□□□□□ -0.62
APBB2-209	ENST00000504484	RBM42	Q9BTD8	480 aa	Known RBP	11.18	□□□□□ -0.62
APBB2-209	ENST00000504484	EYA1	Q99502	592 aa		11.17	□□□□□ -0.62
APBB2-209	ENST00000504484	CHD2	O14647	1828 aa	Known RBP	11.17	□□□□□ -0.62
APBB2-209	ENST00000504484	IGSF1	Q8N6C5	1336 aa		11.16	□□□□□ -0.62
APBB2-209	ENST00000504484	SMARCA5	O60264	1052 aa	Predicted RBP	11.16	□□□□□ -0.62
APBB2-209	ENST00000504484	TTC22	Q5TAA0	569 aa		11.16	□□□□□ -0.62
APBB2-209	ENST00000504484	PTPRC	P08575	1304 aa		11.16	□□□□□ -0.62
APBB2-209	ENST00000504484	CDC45	O75419	566 aa		11.15	□□□□□ -0.62
APBB2-209	ENST00000504484	SLC4A2	P04920	1241 aa		11.15	□□□□□ -0.62
APBB2-209	ENST00000504484		F6X3S4	739 aa		11.15	□□□□□ -0.63
APBB2-209	ENST00000504484	NGDN	Q8NEJ9	315 aa	Known RBP	11.15	□□□□□ -0.63
APBB2-209	ENST00000504484	ANKAR	Q7Z5J8	1434 aa		11.14	□□□□□ -0.63
APBB2-209	ENST00000504484	TSPYL4	Q9UJ04	414 aa		11.14	□□□□□ -0.63
APBB2-209	ENST00000504484	NUTM2G	Q5VZR2	741 aa		11.13	□□□□□ -0.63
APBB2-209	ENST00000504484	RPAP2	Q8IXW5	612 aa	Predicted RBP	11.13	□□□□□ -0.63
APBB2-209	ENST00000504484	APBB1	O00213	710 aa		11.13	□□□□□ -0.63
APBB2-209	ENST00000504484	AMPH	P49418	695 aa		11.13	□□□□□ -0.63
APBB2-209	ENST00000504484	FOXD4L1	Q9NU39	408 aa		11.13	□□□□□ -0.63
APBB2-209	ENST00000504484	KDM3B	Q7LBC6	1761 aa		11.13	□□□□□ -0.63
APBB2-209	ENST00000504484	HSP90AB1	P08238	724 aa	Known RBP	11.12	□□□□□ -0.63
APBB2-209	ENST00000504484	KCNA6	P17658	529 aa		11.12	□□□□□ -0.63
APBB2-209	ENST00000504484	HAP1	P54257	671 aa	Predicted RBP	11.12	□□□□□ -0.63
APBB2-209	ENST00000504484	ANKLE2	Q86XL3	938 aa		11.12	□□□□□ -0.63
APBB2-209	ENST00000504484	TRAK2	O60296	914 aa		11.12	□□□□□ -0.63
APBB2-209	ENST00000504484	SDS	P20132	328 aa		11.12	□□□□□ -0.63
APBB2-209	ENST00000504484	HOXC9	P31274	260 aa		11.12	□□□□□ -0.63
APBB2-209	ENST00000504484	GAS2L2	Q8NHY3	880 aa		11.12	□□□□□ -0.63
APBB2-209	ENST00000504484	TNPO1	Q92973	898 aa	Known RBP	11.12	□□□□□ -0.63
APBB2-209	ENST00000504484	GZF1	Q9H116	711 aa	Predicted RBP	11.12	□□□□□ -0.63
APBB2-209	ENST00000504484	FSD2	A1L4K1	749 aa		11.11	□□□□□ -0.63
APBB2-209	ENST00000504484		K7ELQ4	463 aa	Predicted RBP	11.11	□□□□□ -0.63
APBB2-209	ENST00000504484	NLRP6	P59044	892 aa		11.11	□□□□□ -0.63
APBB2-209	ENST00000504484	SLC4A10	Q6U841	1118 aa		11.11	□□□□□ -0.63
APBB2-209	ENST00000504484	RTF1	Q92541	710 aa	Known RBP	11.11	□□□□□ -0.63
APBB2-209	ENST00000504484	RAB3GAP1	Q15042	981 aa		11.1	□□□□□ -0.63
APBB2-209	ENST00000504484	USP26	Q9BXU7	913 aa		11.1	□□□□□ -0.63
APBB2-209	ENST00000504484	IL17RE	Q8NFR9	667 aa		11.1	□□□□□ -0.63
APBB2-209	ENST00000504484	LMO7	Q8WWI1	1683 aa		11.09	□□□□□ -0.63
APBB2-209	ENST00000504484	MED1	Q15648	1581 aa	Predicted RBP	11.09	□□□□□ -0.63
APBB2-209	ENST00000504484	NFAT5	O94916	1531 aa		11.09	□□□□□ -0.63
APBB2-209	ENST00000504484	NECTIN2	Q92692	538 aa		11.09	□□□□□ -0.63
APBB2-209	ENST00000504484	ARX	Q96QS3	562 aa		11.09	□□□□□ -0.63
APBB2-209	ENST00000504484	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.09	□□□□□ -0.63
APBB2-209	ENST00000504484	XRCC6	P12956	609 aa	Known RBP eCLIP	11.08	□□□□□ -0.63
APBB2-209	ENST00000504484	USHBP1	Q8N6Y0	703 aa		11.08	□□□□□ -0.63
APBB2-209	ENST00000504484	MAP3K5	Q99683	1374 aa		11.08	□□□□□ -0.64
APBB2-209	ENST00000504484	SALL3	Q9BXA9	1300 aa		11.08	□□□□□ -0.64
APBB2-209	ENST00000504484	GNAT3	A8MTJ3	354 aa		11.08	□□□□□ -0.64
APBB2-209	ENST00000504484	SSFA2	P28290	1259 aa		11.08	□□□□□ -0.64
APBB2-209	ENST00000504484	CCT4	P50991	539 aa	Known RBP	11.08	□□□□□ -0.64
APBB2-209	ENST00000504484	LTV1	Q96GA3	475 aa	Predicted RBP	11.08	□□□□□ -0.64
APBB2-209	ENST00000504484	PANK2	Q9BZ23	570 aa		11.08	□□□□□ -0.64
APBB2-209	ENST00000504484	RGPD5	Q99666	1765 aa		11.08	□□□□□ -0.64
APBB2-209	ENST00000504484	PHRF1	Q9P1Y6	1649 aa	Known RBP	11.07	□□□□□ -0.64
APBB2-209	ENST00000504484	FLII	Q13045	1269 aa		11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms