RNA–Protein interactions for RNA: ENST00000504095.1

KDM3B-202, Transcript of lysine demethylase 3B, humanhuman

TSL 3

Gene KDM3B, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-202ENST00000504095 NUDT16Q96DE0 195 aaKnown RBP11.84□□□□□ -0.51
KDM3B-202ENST00000504095 RTN4Q9NQC3 1192 aaKnown RBP11.84□□□□□ -0.51
KDM3B-202ENST00000504095 SRPK2P78362 688 aaKnown RBP11.83□□□□□ -0.52
KDM3B-202ENST00000504095 SLC4A5Q9BY07 1137 aa11.83□□□□□ -0.52
KDM3B-202ENST00000504095 GOLGA8CPA6NN73 597 aa11.82□□□□□ -0.52
KDM3B-202ENST00000504095 FOXO3O43524 673 aa11.82□□□□□ -0.52
KDM3B-202ENST00000504095 CAMK2BQ13554 666 aa11.82□□□□□ -0.52
KDM3B-202ENST00000504095 SPRYD3Q8NCJ5 442 aa11.82□□□□□ -0.52
KDM3B-202ENST00000504095 PMFBP1Q8TBY8 1022 aa11.82□□□□□ -0.52
KDM3B-202ENST00000504095 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.82□□□□□ -0.52
KDM3B-202ENST00000504095 PXDNQ92626 1479 aa11.82□□□□□ -0.52
KDM3B-202ENST00000504095 HSPA5P11021 654 aaKnown RBP11.81□□□□□ -0.52
KDM3B-202ENST00000504095 EIF4G2P78344 907 aaKnown RBP eCLIP11.81□□□□□ -0.52
KDM3B-202ENST00000504095 MRPL50Q8N5N7 158 aaKnown RBP11.81□□□□□ -0.52
KDM3B-202ENST00000504095 SOS2Q07890 1332 aaPredicted RBP11.81□□□□□ -0.52
KDM3B-202ENST00000504095 NPHP3Q7Z494 1330 aa11.81□□□□□ -0.52
KDM3B-202ENST00000504095 DISP3Q9P2K9 1392 aa11.8□□□□□ -0.52
KDM3B-202ENST00000504095 TRPM3Q9HCF6 1732 aaPredicted RBP11.8□□□□□ -0.52
KDM3B-202ENST00000504095 AKAP12Q02952 1782 aa11.8□□□□□ -0.52
KDM3B-202ENST00000504095 PPIP5K1Q6PFW1 1433 aa11.8□□□□□ -0.52
KDM3B-202ENST00000504095 BHMG1C9JSJ3 638 aaPredicted RBP11.8□□□□□ -0.52
KDM3B-202ENST00000504095 XPCQ01831 940 aaPredicted RBP11.8□□□□□ -0.52
KDM3B-202ENST00000504095 TYW1BQ6NUM6 668 aa11.8□□□□□ -0.52
KDM3B-202ENST00000504095 SHPRHQ149N8 1683 aa11.8□□□□□ -0.52
KDM3B-202ENST00000504095 PHF14O94880 888 aa11.79□□□□□ -0.52
KDM3B-202ENST00000504095 PROX2Q3B8N5 592 aa11.79□□□□□ -0.52
KDM3B-202ENST00000504095 CFAP44Q96MT7 982 aa11.79□□□□□ -0.52
KDM3B-202ENST00000504095 ATAD2Q6PL18 1390 aa11.79□□□□□ -0.52
KDM3B-202ENST00000504095 PLEKHG3A1L390 1219 aa11.78□□□□□ -0.52
KDM3B-202ENST00000504095 PPP1R3GB7ZBB8 358 aa11.78□□□□□ -0.52
KDM3B-202ENST00000504095 COL9A1P20849 921 aa11.78□□□□□ -0.52
KDM3B-202ENST00000504095 POLR3AO14802 1390 aaPredicted RBP11.78□□□□□ -0.52
KDM3B-202ENST00000504095 SLC24A1O60721 1099 aa11.77□□□□□ -0.53
KDM3B-202ENST00000504095 TMF1P82094 1093 aa11.77□□□□□ -0.53
KDM3B-202ENST00000504095 PAXIP1Q6ZW49 1069 aaPredicted RBP11.77□□□□□ -0.53
KDM3B-202ENST00000504095 KRT28Q7Z3Y7 464 aa11.77□□□□□ -0.53
KDM3B-202ENST00000504095 NGDNQ8NEJ9 315 aaKnown RBP11.77□□□□□ -0.53
KDM3B-202ENST00000504095 WNT2BQ93097 391 aa11.77□□□□□ -0.53
KDM3B-202ENST00000504095 FBXW7Q969H0 707 aa11.77□□□□□ -0.53
KDM3B-202ENST00000504095 PUS7Q96PZ0 661 aaKnown RBP11.77□□□□□ -0.53
KDM3B-202ENST00000504095 NBPF3Q9H094 633 aa11.77□□□□□ -0.53
KDM3B-202ENST00000504095 CABP1Q9NZU7 370 aa11.77□□□□□ -0.53
KDM3B-202ENST00000504095 ACEP12821 1306 aa11.77□□□□□ -0.53
KDM3B-202ENST00000504095 MYOM1P52179 1685 aa11.77□□□□□ -0.53
KDM3B-202ENST00000504095 ALS2Q96Q42 1657 aa11.77□□□□□ -0.53
KDM3B-202ENST00000504095 JCADQ9P266 1359 aa11.77□□□□□ -0.53
KDM3B-202ENST00000504095 PSME1Q06323 249 aa11.76□□□□□ -0.53
KDM3B-202ENST00000504095 DDX12PQ92771 950 aa11.76□□□□□ -0.53
KDM3B-202ENST00000504095 LRRC59Q96AG4 307 aaKnown RBP11.76□□□□□ -0.53
KDM3B-202ENST00000504095 MON2Q7Z3U7 1717 aa11.76□□□□□ -0.53
KDM3B-202ENST00000504095 COL22A1Q8NFW1 1626 aaPredicted RBP11.75□□□□□ -0.53
KDM3B-202ENST00000504095 THSD4Q6ZMP0 1018 aa11.75□□□□□ -0.53
KDM3B-202ENST00000504095 PNPLA6Q8IY17 1366 aa11.75□□□□□ -0.53
KDM3B-202ENST00000504095 CD163L1Q9NR16 1453 aa11.75□□□□□ -0.53
KDM3B-202ENST00000504095 SPATA31A3Q5VYP0 1347 aa11.74□□□□□ -0.53
KDM3B-202ENST00000504095 SBNO1A3KN83 1393 aa11.74□□□□□ -0.53
KDM3B-202ENST00000504095 TNS3Q68CZ2 1445 aa11.74□□□□□ -0.53
KDM3B-202ENST00000504095 NRKQ7Z2Y5 1582 aa11.74□□□□□ -0.53
KDM3B-202ENST00000504095 USP6P35125 1406 aa11.73□□□□□ -0.53
KDM3B-202ENST00000504095 CPSF1Q10570 1443 aaKnown RBP11.73□□□□□ -0.53
KDM3B-202ENST00000504095 TMC1Q8TDI8 760 aa11.73□□□□□ -0.53
KDM3B-202ENST00000504095 ABCA3Q99758 1704 aa11.73□□□□□ -0.53
KDM3B-202ENST00000504095 SLC12A5Q9H2X9 1139 aa11.73□□□□□ -0.53
KDM3B-202ENST00000504095 CRYBG1Q9Y4K1 1723 aa11.72□□□□□ -0.53
KDM3B-202ENST00000504095 MED1Q15648 1581 aaPredicted RBP11.72□□□□□ -0.53
KDM3B-202ENST00000504095 NINLQ9Y2I6 1382 aa11.72□□□□□ -0.53
KDM3B-202ENST00000504095 C11orf95C9JLR9 678 aaPredicted RBP11.72□□□□□ -0.53
KDM3B-202ENST00000504095 ZEB1P37275 1124 aaPredicted RBP11.72□□□□□ -0.53
KDM3B-202ENST00000504095 CDCA8Q53HL2 280 aa11.72□□□□□ -0.53
KDM3B-202ENST00000504095 EPAS1Q99814 870 aa11.72□□□□□ -0.53
KDM3B-202ENST00000504095 LRP6O75581 1613 aa11.71□□□□□ -0.53
KDM3B-202ENST00000504095 SSH2Q76I76 1423 aa11.71□□□□□ -0.53
KDM3B-202ENST00000504095 C6orf132Q5T0Z8 1188 aa11.71□□□□□ -0.53
KDM3B-202ENST00000504095 RABGEF1Q9UJ41 708 aa11.71□□□□□ -0.53
KDM3B-202ENST00000504095 MARF1Q9Y4F3 1742 aaKnown RBP11.71□□□□□ -0.54
KDM3B-202ENST00000504095 PIK3C2AO00443 1686 aa11.71□□□□□ -0.54
KDM3B-202ENST00000504095 A0A1W2PP64 1363 aa11.7□□□□□ -0.54
KDM3B-202ENST00000504095 ARHGEF10O15013 1369 aa11.7□□□□□ -0.54
KDM3B-202ENST00000504095 KTN1Q86UP2 1357 aaKnown RBP11.7□□□□□ -0.54
KDM3B-202ENST00000504095 SPATA31A6Q5VVP1 1343 aa11.7□□□□□ -0.54
KDM3B-202ENST00000504095 BRD4O60885 1362 aaPredicted RBP11.69□□□□□ -0.54
KDM3B-202ENST00000504095 PHRF1Q9P1Y6 1649 aaKnown RBP11.69□□□□□ -0.54
KDM3B-202ENST00000504095 LMOD2Q6P5Q4 547 aa11.69□□□□□ -0.54
KDM3B-202ENST00000504095 ANKRD36BQ8N2N9 1353 aa11.68□□□□□ -0.54
KDM3B-202ENST00000504095 NUTM2BA6NNL0 878 aaPredicted RBP11.68□□□□□ -0.54
KDM3B-202ENST00000504095 NUTM2EB1AL46 878 aaPredicted RBP11.68□□□□□ -0.54
KDM3B-202ENST00000504095 NBR1Q14596 966 aa11.68□□□□□ -0.54
KDM3B-202ENST00000504095 HDGFL2Q7Z4V5 671 aaPredicted RBP11.68□□□□□ -0.54
KDM3B-202ENST00000504095 NUTM2AQ8IVF1 878 aaPredicted RBP11.68□□□□□ -0.54
KDM3B-202ENST00000504095 POLR3GLQ9BT43 218 aa11.68□□□□□ -0.54
KDM3B-202ENST00000504095 TERF2IPQ9NYB0 399 aa11.68□□□□□ -0.54
KDM3B-202ENST00000504095 KIF7Q2M1P5 1343 aa11.67□□□□□ -0.54
KDM3B-202ENST00000504095 TTC21BQ7Z4L5 1316 aa11.67□□□□□ -0.54
KDM3B-202ENST00000504095 CABLES1Q8TDN4 633 aa11.67□□□□□ -0.54
KDM3B-202ENST00000504095 KIAA1468Q9P260 1216 aa11.67□□□□□ -0.54
KDM3B-202ENST00000504095 USP54Q70EL1 1684 aa11.67□□□□□ -0.54
KDM3B-202ENST00000504095 EDC4Q6P2E9 1401 aaKnown RBP11.67□□□□□ -0.54
KDM3B-202ENST00000504095 KIF20BQ96Q89 1820 aa11.66□□□□□ -0.54
KDM3B-202ENST00000504095 PDIA6Q15084 440 aa11.66□□□□□ -0.54
KDM3B-202ENST00000504095 NUTM2GQ5VZR2 741 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms