RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 PPP2R1AP30153 589 aa7.14□□□□□ -1.27
LINC01340-201ENST00000504012 RBM6P78332 1123 aaKnown RBP7.14□□□□□ -1.27
LINC01340-201ENST00000504012 MVPQ14764 893 aaKnown RBP7.14□□□□□ -1.27
LINC01340-201ENST00000504012 FOXD4L5Q5VV16 416 aaPredicted RBP7.14□□□□□ -1.27
LINC01340-201ENST00000504012 NBPF11Q86T75 865 aa7.14□□□□□ -1.27
LINC01340-201ENST00000504012 WDR63Q8IWG1 891 aa7.14□□□□□ -1.27
LINC01340-201ENST00000504012 PANK1Q8TE04 598 aa7.14□□□□□ -1.27
LINC01340-201ENST00000504012 FOXD4L4Q8WXT5 416 aaPredicted RBP7.14□□□□□ -1.27
LINC01340-201ENST00000504012 UBXN6Q9BZV1 441 aa7.14□□□□□ -1.27
LINC01340-201ENST00000504012 CXorf56Q9H5V9 222 aa7.14□□□□□ -1.27
LINC01340-201ENST00000504012 TTC12Q9H892 705 aaPredicted RBP7.14□□□□□ -1.27
LINC01340-201ENST00000504012 POLKQ9UBT6 870 aa7.14□□□□□ -1.27
LINC01340-201ENST00000504012 ANKRD50Q9ULJ7 1429 aa7.13□□□□□ -1.27
LINC01340-201ENST00000504012 ELP1O95163 1332 aa7.13□□□□□ -1.27
LINC01340-201ENST00000504012 CCDC171Q6TFL3 1326 aa7.13□□□□□ -1.27
LINC01340-201ENST00000504012 NEMFO60524 1076 aa7.13□□□□□ -1.27
LINC01340-201ENST00000504012 H2AFXP16104 143 aaPredicted RBP7.13□□□□□ -1.27
LINC01340-201ENST00000504012 ATP6V1AP38606 617 aa7.13□□□□□ -1.27
LINC01340-201ENST00000504012 MCM2P49736 904 aa7.13□□□□□ -1.27
LINC01340-201ENST00000504012 NUCB1Q02818 461 aa7.13□□□□□ -1.27
LINC01340-201ENST00000504012 ZKSCAN8Q15776 578 aaPredicted RBP7.13□□□□□ -1.27
LINC01340-201ENST00000504012 NBPF9Q3BBW0 867 aa7.13□□□□□ -1.27
LINC01340-201ENST00000504012 TTC31Q49AM3 519 aaPredicted RBP7.13□□□□□ -1.27
LINC01340-201ENST00000504012 KMT5BQ4FZB7 885 aa7.13□□□□□ -1.27
LINC01340-201ENST00000504012 NBPF10Q6P3W6 841 aaKnown RBP7.13□□□□□ -1.27
LINC01340-201ENST00000504012 TMED8Q6PL24 325 aaPredicted RBP7.13□□□□□ -1.27
LINC01340-201ENST00000504012 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.13□□□□□ -1.27
LINC01340-201ENST00000504012 IFNLR1Q8IU57 520 aaPredicted RBP7.13□□□□□ -1.27
LINC01340-201ENST00000504012 TMEM87AQ8NBN3 555 aa7.13□□□□□ -1.27
LINC01340-201ENST00000504012 PPM1EQ8WY54 764 aa7.13□□□□□ -1.27
LINC01340-201ENST00000504012 ZNF428Q96B54 188 aa7.13□□□□□ -1.27
LINC01340-201ENST00000504012 ZNF446Q9NWS9 450 aa7.13□□□□□ -1.27
LINC01340-201ENST00000504012 DNMT1P26358 1616 aaKnown RBP7.12□□□□□ -1.27
LINC01340-201ENST00000504012 CFTRP13569 1480 aa7.12□□□□□ -1.27
LINC01340-201ENST00000504012 PLEKHG2Q9H7P9 1386 aa7.12□□□□□ -1.27
LINC01340-201ENST00000504012 PTPRCP08575 1304 aa7.12□□□□□ -1.27
LINC01340-201ENST00000504012 CCDC189A1A4V9 331 aa7.12□□□□□ -1.27
LINC01340-201ENST00000504012 ERICH4A6NGS2 130 aa7.12□□□□□ -1.27
LINC01340-201ENST00000504012 TTC36A6NLP5 189 aa7.12□□□□□ -1.27
LINC01340-201ENST00000504012 TPM1P09493 284 aa7.12□□□□□ -1.27
LINC01340-201ENST00000504012 SSR1P43307 286 aaKnown RBP7.12□□□□□ -1.27
LINC01340-201ENST00000504012 TDO2P48775 406 aa7.12□□□□□ -1.27
LINC01340-201ENST00000504012 CCDC183Q5T5S1 534 aa7.12□□□□□ -1.27
LINC01340-201ENST00000504012 MCTP2Q6DN12 878 aa7.12□□□□□ -1.27
LINC01340-201ENST00000504012 LMOD2Q6P5Q4 547 aa7.12□□□□□ -1.27
LINC01340-201ENST00000504012 SRLQ86TD4 932 aa7.12□□□□□ -1.27
LINC01340-201ENST00000504012 STAG1Q8WVM7 1258 aa7.12□□□□□ -1.27
LINC01340-201ENST00000504012 EXOC4Q96A65 974 aa7.12□□□□□ -1.27
LINC01340-201ENST00000504012 AK7Q96M32 723 aa7.12□□□□□ -1.27
LINC01340-201ENST00000504012 RBM27Q9P2N5 1060 aaKnown RBP7.12□□□□□ -1.27
LINC01340-201ENST00000504012 CEP170Q5SW79 1584 aa7.12□□□□□ -1.27
LINC01340-201ENST00000504012 DAPK1P53355 1430 aa7.11□□□□□ -1.27
LINC01340-201ENST00000504012 FAM177BA6PVY3 158 aa7.11□□□□□ -1.27
LINC01340-201ENST00000504012 BRD1O95696 1058 aa7.11□□□□□ -1.27
LINC01340-201ENST00000504012 PRR29P0C7W0 189 aa7.11□□□□□ -1.27
LINC01340-201ENST00000504012 TNNT1P13805 278 aa7.11□□□□□ -1.27
LINC01340-201ENST00000504012 MX1P20591 662 aa7.11□□□□□ -1.27
LINC01340-201ENST00000504012 FXR2P51116 673 aaKnown RBP eCLIP7.11□□□□□ -1.27
LINC01340-201ENST00000504012 ZSCAN26Q16670 478 aa7.11□□□□□ -1.27
LINC01340-201ENST00000504012 C11orf91Q3C1V1 193 aa7.11□□□□□ -1.27
LINC01340-201ENST00000504012 SYT10Q6XYQ8 523 aa7.11□□□□□ -1.27
LINC01340-201ENST00000504012 MSL3Q8N5Y2 521 aaKnown RBP7.11□□□□□ -1.27
LINC01340-201ENST00000504012 TBC1D22AQ8WUA7 517 aa7.11□□□□□ -1.27
LINC01340-201ENST00000504012 INTS4Q96HW7 963 aaKnown RBP7.11□□□□□ -1.27
LINC01340-201ENST00000504012 UTP14AQ9BVJ6 771 aaKnown RBP7.11□□□□□ -1.27
LINC01340-201ENST00000504012 KCNF1Q9H3M0 494 aa7.11□□□□□ -1.27
LINC01340-201ENST00000504012 A1CFQ9NQ94 594 aaKnown RBP7.11□□□□□ -1.27
LINC01340-201ENST00000504012 PYCARDQ9ULZ3 195 aa7.11□□□□□ -1.27
LINC01340-201ENST00000504012 DDX19BQ9UMR2 479 aa7.11□□□□□ -1.27
LINC01340-201ENST00000504012 ZDHHC9Q9Y397 364 aa7.11□□□□□ -1.27
LINC01340-201ENST00000504012 RRP15Q9Y3B9 282 aaKnown RBP7.11□□□□□ -1.27
LINC01340-201ENST00000504012 CLTCL1P53675 1640 aa7.1□□□□□ -1.27
LINC01340-201ENST00000504012 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.1□□□□□ -1.27
LINC01340-201ENST00000504012 ARID3CA6NKF2 412 aa7.1□□□□□ -1.27
LINC01340-201ENST00000504012 GOLIM4O00461 696 aa7.1□□□□□ -1.27
LINC01340-201ENST00000504012 SGSM2O43147 1006 aa7.1□□□□□ -1.27
LINC01340-201ENST00000504012 ST18O60284 1047 aa7.1□□□□□ -1.27
LINC01340-201ENST00000504012 SLU7O95391 586 aaKnown RBP7.1□□□□□ -1.27
LINC01340-201ENST00000504012 CD2BP2O95400 341 aaKnown RBP7.1□□□□□ -1.27
LINC01340-201ENST00000504012 DHX8Q14562 1220 aaKnown RBP7.1□□□□□ -1.27
LINC01340-201ENST00000504012 MMS22LQ6ZRQ5 1243 aa7.1□□□□□ -1.27
LINC01340-201ENST00000504012 P3H3Q8IVL6 736 aa7.1□□□□□ -1.27
LINC01340-201ENST00000504012 NFATC2IPQ8NCF5 419 aa7.1□□□□□ -1.27
LINC01340-201ENST00000504012 CHMP4CQ96CF2 233 aa7.1□□□□□ -1.27
LINC01340-201ENST00000504012 FAM210AQ96ND0 272 aa7.1□□□□□ -1.27
LINC01340-201ENST00000504012 FAM107BQ9H098 131 aa7.1□□□□□ -1.27
LINC01340-201ENST00000504012 MKRN1Q9UHC7 482 aaKnown RBP7.1□□□□□ -1.27
LINC01340-201ENST00000504012 SUFUQ9UMX1 484 aa7.1□□□□□ -1.27
LINC01340-201ENST00000504012 FHOD1Q9Y613 1164 aa7.1□□□□□ -1.27
LINC01340-201ENST00000504012 CFAP74Q9C0B2 1584 aa7.1□□□□□ -1.27
LINC01340-201ENST00000504012 ADGRL2O95490 1459 aa7.1□□□□□ -1.27
LINC01340-201ENST00000504012 CCDC141Q6ZP82 1450 aa7.1□□□□□ -1.27
LINC01340-201ENST00000504012 NUP160Q12769 1436 aa7.1□□□□□ -1.27
LINC01340-201ENST00000504012 TRPM1Q7Z4N2 1603 aa7.09□□□□□ -1.27
LINC01340-201ENST00000504012 KLHL33A6NCF5 533 aa7.09□□□□□ -1.27
LINC01340-201ENST00000504012 ECM2O94769 699 aaPredicted RBP7.09□□□□□ -1.27
LINC01340-201ENST00000504012 ZRANB2O95218 330 aaKnown RBP eCLIP7.09□□□□□ -1.27
LINC01340-201ENST00000504012 LIG1P18858 919 aa7.09□□□□□ -1.27
LINC01340-201ENST00000504012 ERCC3P19447 782 aa7.09□□□□□ -1.27
LINC01340-201ENST00000504012 CDC25BP30305 580 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms