RNA–Protein interactions for RNA: ENST00000503678.5

SMN2-204, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-204ENST00000503678 CNTNAP3Q9BZ76 1288 aa7.7□□□□□ -1.18
SMN2-204ENST00000503678 ZC3H4Q9UPT8 1303 aaKnown RBP7.7□□□□□ -1.18
SMN2-204ENST00000503678 ZBBXA8MT70 800 aa7.69□□□□□ -1.18
SMN2-204ENST00000503678 FOXK2Q01167 660 aa7.69□□□□□ -1.18
SMN2-204ENST00000503678 FAM174AQ8TBP5 190 aa7.69□□□□□ -1.18
SMN2-204ENST00000503678 CDK15Q96Q40 435 aa7.69□□□□□ -1.18
SMN2-204ENST00000503678 ZIC2O95409 532 aaPredicted RBP7.68□□□□□ -1.18
SMN2-204ENST00000503678 FBXO45P0C2W1 286 aa7.68□□□□□ -1.18
SMN2-204ENST00000503678 ELOAQ14241 798 aaKnown RBP7.68□□□□□ -1.18
SMN2-204ENST00000503678 C6orf118Q5T5N4 469 aa7.68□□□□□ -1.18
SMN2-204ENST00000503678 FKBPLQ9UIM3 349 aa7.68□□□□□ -1.18
SMN2-204ENST00000503678 CARNS1A5YM72 827 aa7.67□□□□□ -1.18
SMN2-204ENST00000503678 UPP2O95045 317 aa7.67□□□□□ -1.18
SMN2-204ENST00000503678 CDCA8Q53HL2 280 aa7.67□□□□□ -1.18
SMN2-204ENST00000503678 ZFAND3Q9H8U3 227 aa7.67□□□□□ -1.18
SMN2-204ENST00000503678 IVNS1ABPQ9Y6Y0 642 aa7.67□□□□□ -1.18
SMN2-204ENST00000503678 BMP2P12643 396 aa7.66□□□□□ -1.18
SMN2-204ENST00000503678 NR5A1Q13285 461 aa7.66□□□□□ -1.18
SMN2-204ENST00000503678 KANK4Q5T7N3 995 aaPredicted RBP7.66□□□□□ -1.18
SMN2-204ENST00000503678 ZNF385CQ66K41 422 aaPredicted RBP7.66□□□□□ -1.18
SMN2-204ENST00000503678 KANK3Q6NY19 840 aa7.66□□□□□ -1.18
SMN2-204ENST00000503678 SND1Q7KZF4 910 aaKnown RBP eCLIP7.66□□□□□ -1.18
SMN2-204ENST00000503678 ZNF592Q92610 1267 aa7.66□□□□□ -1.18
SMN2-204ENST00000503678 ITPKCQ96DU7 683 aa7.66□□□□□ -1.18
SMN2-204ENST00000503678 SOS2Q07890 1332 aaPredicted RBP7.66□□□□□ -1.18
SMN2-204ENST00000503678 F12P00748 615 aaPredicted RBP7.65□□□□□ -1.18
SMN2-204ENST00000503678 IRS1P35568 1242 aa7.65□□□□□ -1.18
SMN2-204ENST00000503678 CCDC27Q2M243 656 aa7.65□□□□□ -1.18
SMN2-204ENST00000503678 XP32Q5T750 250 aa7.65□□□□□ -1.18
SMN2-204ENST00000503678 FOXD4L5Q5VV16 416 aaPredicted RBP7.65□□□□□ -1.18
SMN2-204ENST00000503678 FOXD4L4Q8WXT5 416 aaPredicted RBP7.65□□□□□ -1.18
SMN2-204ENST00000503678 NANOS1Q8WY41 292 aaKnown RBP7.65□□□□□ -1.18
SMN2-204ENST00000503678 GNEQ9Y223 722 aaKnown RBP7.65□□□□□ -1.18
SMN2-204ENST00000503678 PLEKHM2Q8IWE5 1019 aa7.64□□□□□ -1.19
SMN2-204ENST00000503678 SVOPQ8N4V2 548 aa7.64□□□□□ -1.19
SMN2-204ENST00000503678 COL25A1Q9BXS0 654 aaPredicted RBP7.64□□□□□ -1.19
SMN2-204ENST00000503678 DNMT3LQ9UJW3 386 aa7.64□□□□□ -1.19
SMN2-204ENST00000503678 USP17L3A6NCW0 530 aa7.63□□□□□ -1.19
SMN2-204ENST00000503678 USP17L4A6NCW7 530 aa7.63□□□□□ -1.19
SMN2-204ENST00000503678 ARHGEF15O94989 841 aa7.63□□□□□ -1.19
SMN2-204ENST00000503678 SLURP2P0DP57 97 aa7.63□□□□□ -1.19
SMN2-204ENST00000503678 MCCD1P59942 119 aaPredicted RBP7.63□□□□□ -1.19
SMN2-204ENST00000503678 AGERQ15109 404 aa7.63□□□□□ -1.19
SMN2-204ENST00000503678 USP17L2Q6R6M4 530 aa7.63□□□□□ -1.19
SMN2-204ENST00000503678 USP17L1Q7RTZ2 530 aa7.63□□□□□ -1.19
SMN2-204ENST00000503678 LINC00528Q8N1L1 170 aa7.63□□□□□ -1.19
SMN2-204ENST00000503678 MAP10Q9P2G4 905 aa7.63□□□□□ -1.19
SMN2-204ENST00000503678 AMOTL2Q9Y2J4 779 aa7.63□□□□□ -1.19
SMN2-204ENST00000503678 GPSM3Q9Y4H4 160 aa7.63□□□□□ -1.19
SMN2-204ENST00000503678 USP17L5A8MUK1 530 aa7.62□□□□□ -1.19
SMN2-204ENST00000503678 PIK3CDO00329 1044 aa7.62□□□□□ -1.19
SMN2-204ENST00000503678 GRM5P41594 1212 aa7.62□□□□□ -1.19
SMN2-204ENST00000503678 MARSP56192 900 aaKnown RBP7.62□□□□□ -1.19
SMN2-204ENST00000503678 ARID5BQ14865 1188 aa7.62□□□□□ -1.19
SMN2-204ENST00000503678 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.62□□□□□ -1.19
SMN2-204ENST00000503678 FAM196BA6NMK8 535 aa7.61□□□□□ -1.19
SMN2-204ENST00000503678 NR3C2P08235 984 aa7.61□□□□□ -1.19
SMN2-204ENST00000503678 SKIP12755 728 aa7.61□□□□□ -1.19
SMN2-204ENST00000503678 RBM25P49756 843 aaKnown RBP7.61□□□□□ -1.19
SMN2-204ENST00000503678 MEIOBQ8N635 442 aa7.61□□□□□ -1.19
SMN2-204ENST00000503678 ARMC2Q8NEN0 867 aa7.61□□□□□ -1.19
SMN2-204ENST00000503678 GPKOWQ92917 476 aaPredicted RBP eCLIP7.61□□□□□ -1.19
SMN2-204ENST00000503678 SCARF2Q96GP6 870 aaPredicted RBP7.61□□□□□ -1.19
SMN2-204ENST00000503678 ZMIZ1Q9ULJ6 1067 aa7.61□□□□□ -1.19
SMN2-204ENST00000503678 NOVA2Q9UNW9 492 aaKnown RBP7.61□□□□□ -1.19
SMN2-204ENST00000503678 LZTS3O60299 673 aaPredicted RBP7.6□□□□□ -1.19
SMN2-204ENST00000503678 PTSQ03393 145 aa7.6□□□□□ -1.19
SMN2-204ENST00000503678 TMEM164Q5U3C3 297 aa7.6□□□□□ -1.19
SMN2-204ENST00000503678 CCER1Q8TC90 406 aaPredicted RBP7.6□□□□□ -1.19
SMN2-204ENST00000503678 FOXJ1Q92949 421 aa7.6□□□□□ -1.19
SMN2-204ENST00000503678 TSEN34Q9BSV6 310 aaKnown RBP7.6□□□□□ -1.19
SMN2-204ENST00000503678 PTK2Q05397 1052 aa7.59□□□□□ -1.19
SMN2-204ENST00000503678 RNFT1Q5M7Z0 435 aa7.59□□□□□ -1.19
SMN2-204ENST00000503678 PDXDC2PQ6P474 469 aa7.59□□□□□ -1.19
SMN2-204ENST00000503678 BPHLQ86WA6 291 aaPredicted RBP7.59□□□□□ -1.19
SMN2-204ENST00000503678 WHAMMQ8TF30 809 aa7.59□□□□□ -1.19
SMN2-204ENST00000503678 STK32AQ8WU08 396 aa7.59□□□□□ -1.19
SMN2-204ENST00000503678 SLFNL1Q499Z3 407 aa7.58□□□□□ -1.2
SMN2-204ENST00000503678 CEP126Q9P2H0 1117 aa7.58□□□□□ -1.2
SMN2-204ENST00000503678 USP17L15C9J2P7 530 aa7.57□□□□□ -1.2
SMN2-204ENST00000503678 USP17L10C9JJH3 530 aa7.57□□□□□ -1.2
SMN2-204ENST00000503678 USP17L13C9JLJ4 530 aa7.57□□□□□ -1.2
SMN2-204ENST00000503678 USP17L12C9JPN9 530 aa7.57□□□□□ -1.2
SMN2-204ENST00000503678 USP17L11C9JVI0 530 aa7.57□□□□□ -1.2
SMN2-204ENST00000503678 USP17L21D6R901 530 aa7.57□□□□□ -1.2
SMN2-204ENST00000503678 USP17L18D6R9N7 530 aa7.57□□□□□ -1.2
SMN2-204ENST00000503678 USP17L22D6RA61 530 aa7.57□□□□□ -1.2
SMN2-204ENST00000503678 USP17L17D6RBQ6 530 aa7.57□□□□□ -1.2
SMN2-204ENST00000503678 USP17L19D6RCP7 530 aa7.57□□□□□ -1.2
SMN2-204ENST00000503678 USP17L20D6RJB6 530 aa7.57□□□□□ -1.2
SMN2-204ENST00000503678 E9PSI1 815 aa7.57□□□□□ -1.2
SMN2-204ENST00000503678 ATP5J2-PTCD1G3V325 749 aa7.57□□□□□ -1.2
SMN2-204ENST00000503678 ADAM23O75077 832 aa7.57□□□□□ -1.2
SMN2-204ENST00000503678 USP17L24Q0WX57 530 aa7.57□□□□□ -1.2
SMN2-204ENST00000503678 NBPF14Q5TI25 921 aa7.57□□□□□ -1.2
SMN2-204ENST00000503678 LARP1Q6PKG0 1096 aaKnown RBP7.57□□□□□ -1.2
SMN2-204ENST00000503678 TXNDC2Q86VQ3 553 aa7.57□□□□□ -1.2
SMN2-204ENST00000503678 CCDC155Q8N6L0 562 aa7.57□□□□□ -1.2
SMN2-204ENST00000503678 MKRN1Q9UHC7 482 aaKnown RBP7.57□□□□□ -1.2
SMN2-204ENST00000503678 TTLL8A6PVC2 850 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms