RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 SEC24BO95487 1268 aa28.45■■■□□ 2.15
PCDH1-204ENST00000503492 PSME1Q06323 249 aa28.44■■■□□ 2.14
PCDH1-204ENST00000503492 CHMP4BQ9H444 224 aaKnown RBP28.44■■■□□ 2.14
PCDH1-204ENST00000503492 USP19O94966 1318 aa28.44■■■□□ 2.14
PCDH1-204ENST00000503492 MIS18AQ9NYP9 233 aa28.44■■■□□ 2.14
PCDH1-204ENST00000503492 HAP1P54257 671 aaPredicted RBP28.43■■■□□ 2.14
PCDH1-204ENST00000503492 LTV1Q96GA3 475 aaPredicted RBP28.43■■■□□ 2.14
PCDH1-204ENST00000503492 RTL1A6NKG5 1358 aa28.43■■■□□ 2.14
PCDH1-204ENST00000503492 LTN1O94822 1766 aa28.43■■■□□ 2.14
PCDH1-204ENST00000503492 NFAT5O94916 1531 aa28.41■■■□□ 2.14
PCDH1-204ENST00000503492 C1orf115Q9H7X2 142 aa28.4■■■□□ 2.14
PCDH1-204ENST00000503492 ORAI2Q96SN7 254 aa28.39■■■□□ 2.14
PCDH1-204ENST00000503492 HTATSF1O43719 755 aaKnown RBP28.39■■■□□ 2.14
PCDH1-204ENST00000503492 TSPYL4Q9UJ04 414 aa28.39■■■□□ 2.14
PCDH1-204ENST00000503492 IP6K1Q92551 441 aa28.38■■■□□ 2.13
PCDH1-204ENST00000503492 RGS12O14924 1447 aa28.38■■■□□ 2.13
PCDH1-204ENST00000503492 NUCB1Q02818 461 aa28.37■■■□□ 2.13
PCDH1-204ENST00000503492 LRRC37A3O60309 1634 aa28.37■■■□□ 2.13
PCDH1-204ENST00000503492 GNAT3A8MTJ3 354 aa28.36■■■□□ 2.13
PCDH1-204ENST00000503492 NBR1Q14596 966 aa28.36■■■□□ 2.13
PCDH1-204ENST00000503492 USHBP1Q8N6Y0 703 aa28.35■■■□□ 2.13
PCDH1-204ENST00000503492 INTS3Q68E01 1043 aaKnown RBP28.35■■■□□ 2.13
PCDH1-204ENST00000503492 SIRT2Q8IXJ6 389 aa28.35■■■□□ 2.13
PCDH1-204ENST00000503492 SLC4A3P48751 1232 aa28.34■■■□□ 2.13
PCDH1-204ENST00000503492 KCNH5Q8NCM2 988 aa28.33■■■□□ 2.13
PCDH1-204ENST00000503492 MSH6P52701 1360 aa28.33■■■□□ 2.13
PCDH1-204ENST00000503492 PROSER2Q86WR7 435 aaPredicted RBP28.33■■■□□ 2.13
PCDH1-204ENST00000503492 MAP3K5Q99683 1374 aa28.32■■■□□ 2.12
PCDH1-204ENST00000503492 XPCQ01831 940 aaPredicted RBP28.32■■■□□ 2.12
PCDH1-204ENST00000503492 DNAJC5Q9H3Z4 198 aa28.32■■■□□ 2.12
PCDH1-204ENST00000503492 PTPRCP08575 1304 aa28.31■■■□□ 2.12
PCDH1-204ENST00000503492 CHD1LQ86WJ1 897 aa28.31■■■□□ 2.12
PCDH1-204ENST00000503492 LNPKQ9C0E8 428 aa28.31■■■□□ 2.12
PCDH1-204ENST00000503492 IL17REQ8NFR9 667 aa28.31■■■□□ 2.12
PCDH1-204ENST00000503492 SLC4A2P04920 1241 aa28.3■■■□□ 2.12
PCDH1-204ENST00000503492 GCC1Q96CN9 775 aa28.3■■■□□ 2.12
PCDH1-204ENST00000503492 NBPF6Q5VWK0 638 aa28.29■■■□□ 2.12
PCDH1-204ENST00000503492 NBPF4Q96M43 638 aa28.29■■■□□ 2.12
PCDH1-204ENST00000503492 PHRF1Q9P1Y6 1649 aaKnown RBP28.29■■■□□ 2.12
PCDH1-204ENST00000503492 ZBTB7CA1YPR0 619 aa28.28■■■□□ 2.12
PCDH1-204ENST00000503492 DAXXQ9UER7 740 aaPredicted RBP28.26■■■□□ 2.12
PCDH1-204ENST00000503492 GCP02774 474 aa28.26■■■□□ 2.11
PCDH1-204ENST00000503492 ANKRD45Q5TZF3 282 aa28.26■■■□□ 2.11
PCDH1-204ENST00000503492 SLIT3O75094 1523 aa28.25■■■□□ 2.11
PCDH1-204ENST00000503492 G2E3Q7L622 706 aa28.25■■■□□ 2.11
PCDH1-204ENST00000503492 C1orf167Q5SNV9 1468 aa28.25■■■□□ 2.11
PCDH1-204ENST00000503492 TRPM3Q9HCF6 1732 aaPredicted RBP28.24■■■□□ 2.11
PCDH1-204ENST00000503492 RGPD2P0DJD1 1756 aa28.24■■■□□ 2.11
PCDH1-204ENST00000503492 C19orf44Q9H6X5 657 aa28.24■■■□□ 2.11
PCDH1-204ENST00000503492 UPF2Q9HAU5 1272 aaKnown RBP28.24■■■□□ 2.11
PCDH1-204ENST00000503492 ARHGEF25Q86VW2 580 aa28.23■■■□□ 2.11
PCDH1-204ENST00000503492 TBC1D32Q96NH3 1257 aa28.23■■■□□ 2.11
PCDH1-204ENST00000503492 TAF7Q15545 349 aaPredicted RBP28.23■■■□□ 2.11
PCDH1-204ENST00000503492 KRT28Q7Z3Y7 464 aa28.22■■■□□ 2.11
PCDH1-204ENST00000503492 PLEKHG5O94827 1062 aa28.22■■■□□ 2.11
PCDH1-204ENST00000503492 LRRC59Q96AG4 307 aaKnown RBP28.22■■■□□ 2.11
PCDH1-204ENST00000503492 LMOD2Q6P5Q4 547 aa28.21■■■□□ 2.11
PCDH1-204ENST00000503492 BABAM1Q9NWV8 329 aa28.21■■■□□ 2.11
PCDH1-204ENST00000503492 ATP10DQ9P241 1426 aa28.21■■■□□ 2.11
PCDH1-204ENST00000503492 KIF1AQ12756 1690 aa28.2■■■□□ 2.1
PCDH1-204ENST00000503492 ANKRD44Q8N8A2 993 aa28.18■■■□□ 2.1
PCDH1-204ENST00000503492 MEIS3Q99687 375 aa28.18■■■□□ 2.1
PCDH1-204ENST00000503492 CEMIPQ8WUJ3 1361 aa28.18■■■□□ 2.1
PCDH1-204ENST00000503492 FAM208AQ9UK61 1670 aaKnown RBP28.18■■■□□ 2.1
PCDH1-204ENST00000503492 STK31Q9BXU1 1019 aa28.18■■■□□ 2.1
PCDH1-204ENST00000503492 F6X3S4 739 aa28.17■■■□□ 2.1
PCDH1-204ENST00000503492 CCDC30Q5VVM6 783 aa28.17■■■□□ 2.1
PCDH1-204ENST00000503492 DCTPP1Q9H773 170 aa28.17■■■□□ 2.1
PCDH1-204ENST00000503492 CEP85Q6P2H3 762 aa28.15■■■□□ 2.1
PCDH1-204ENST00000503492 RPAP2Q8IXW5 612 aaPredicted RBP28.15■■■□□ 2.1
PCDH1-204ENST00000503492 SOS1Q07889 1333 aaPredicted RBP28.15■■■□□ 2.1
PCDH1-204ENST00000503492 STRCP1A6NGW2 1772 aa28.14■■■□□ 2.1
PCDH1-204ENST00000503492 SLC4A10Q6U841 1118 aa28.14■■■□□ 2.1
PCDH1-204ENST00000503492 NECTIN2Q92692 538 aa28.14■■■□□ 2.1
PCDH1-204ENST00000503492 LGR6Q9HBX8 967 aa28.14■■■□□ 2.1
PCDH1-204ENST00000503492 NCAPD2Q15021 1401 aa28.14■■■□□ 2.09
PCDH1-204ENST00000503492 MFAP1P55081 439 aaKnown RBP28.14■■■□□ 2.09
PCDH1-204ENST00000503492 BMP2KLQ5H9B9 411 aa28.14■■■□□ 2.09
PCDH1-204ENST00000503492 TMEM94Q12767 1356 aa28.14■■■□□ 2.09
PCDH1-204ENST00000503492 MED1Q15648 1581 aaPredicted RBP28.14■■■□□ 2.09
PCDH1-204ENST00000503492 CCT4P50991 539 aaKnown RBP28.13■■■□□ 2.09
PCDH1-204ENST00000503492 FLIIQ13045 1269 aa28.13■■■□□ 2.09
PCDH1-204ENST00000503492 ANKRD24Q8TF21 1146 aa28.13■■■□□ 2.09
PCDH1-204ENST00000503492 MST1RQ04912 1400 aa28.12■■■□□ 2.09
PCDH1-204ENST00000503492 AXIN2Q9Y2T1 843 aa28.11■■■□□ 2.09
PCDH1-204ENST00000503492 LMO7Q8WWI1 1683 aa28.11■■■□□ 2.09
PCDH1-204ENST00000503492 RTL5Q5HYW3 569 aaPredicted RBP28.11■■■□□ 2.09
PCDH1-204ENST00000503492 ALS2Q96Q42 1657 aa28.11■■■□□ 2.09
PCDH1-204ENST00000503492 ATF3P18847 181 aa28.1■■■□□ 2.09
PCDH1-204ENST00000503492 CACNA1FO60840 1977 aa28.1■■■□□ 2.09
PCDH1-204ENST00000503492 PLEKHO1Q53GL0 409 aaPredicted RBP28.1■■■□□ 2.09
PCDH1-204ENST00000503492 AKAP4Q5JQC9 854 aa28.1■■■□□ 2.09
PCDH1-204ENST00000503492 ZNF530Q6P9A1 599 aaPredicted RBP28.1■■■□□ 2.09
PCDH1-204ENST00000503492 C22orf23Q9BZE7 217 aa28.09■■■□□ 2.09
PCDH1-204ENST00000503492 FKBP5Q13451 457 aaPredicted RBP28.08■■■□□ 2.09
PCDH1-204ENST00000503492 BECN1Q14457 450 aa28.08■■■□□ 2.09
PCDH1-204ENST00000503492 CAMTA1Q9Y6Y1 1673 aa28.07■■■□□ 2.08
PCDH1-204ENST00000503492 AMOTQ4VCS5 1084 aa28.07■■■□□ 2.08
PCDH1-204ENST00000503492 KDM3BQ7LBC6 1761 aa28.06■■■□□ 2.08
PCDH1-204ENST00000503492 PXDNQ92626 1479 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms