RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 TNS1Q9HBL0 1735 aaKnown RBP24.62■■□□□ 1.53
PDLIM7-209ENST00000503346 PPP2R1AP30153 589 aa24.62■■□□□ 1.53
PDLIM7-209ENST00000503346 BCL11BQ9C0K0 894 aaPredicted RBP24.62■■□□□ 1.53
PDLIM7-209ENST00000503346 PARD3Q8TEW0 1356 aa24.62■■□□□ 1.53
PDLIM7-209ENST00000503346 APBA3O96018 575 aa24.61■■□□□ 1.53
PDLIM7-209ENST00000503346 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.61■■□□□ 1.53
PDLIM7-209ENST00000503346 COL3A1P02461 1466 aaPredicted RBP24.6■■□□□ 1.53
PDLIM7-209ENST00000503346 DIAPH1O60610 1272 aaKnown RBP24.6■■□□□ 1.53
PDLIM7-209ENST00000503346 PCDH11XQ9BZA7 1347 aa24.6■■□□□ 1.53
PDLIM7-209ENST00000503346 PCDH11YQ9BZA8 1340 aa24.6■■□□□ 1.53
PDLIM7-209ENST00000503346 KDRP35968 1356 aa24.59■■□□□ 1.53
PDLIM7-209ENST00000503346 EN1Q05925 392 aaPredicted RBP24.59■■□□□ 1.53
PDLIM7-209ENST00000503346 PTF1AQ7RTS3 328 aa24.58■■□□□ 1.53
PDLIM7-209ENST00000503346 SPG7Q9UQ90 795 aa24.58■■□□□ 1.53
PDLIM7-209ENST00000503346 SHANK3Q9BYB0 1731 aa24.58■■□□□ 1.52
PDLIM7-209ENST00000503346 ZNF316A6NFI3 1004 aaPredicted RBP24.57■■□□□ 1.52
PDLIM7-209ENST00000503346 CYP27B1O15528 508 aa24.57■■□□□ 1.52
PDLIM7-209ENST00000503346 SULT6B1Q6IMI4 303 aa24.57■■□□□ 1.52
PDLIM7-209ENST00000503346 AEBP1Q8IUX7 1158 aa24.57■■□□□ 1.52
PDLIM7-209ENST00000503346 ACSBG1Q96GR2 724 aa24.56■■□□□ 1.52
PDLIM7-209ENST00000503346 CFAP53Q96M91 514 aa24.56■■□□□ 1.52
PDLIM7-209ENST00000503346 CAMKK2Q96RR4 588 aa24.56■■□□□ 1.52
PDLIM7-209ENST00000503346 SBF2Q86WG5 1849 aa24.56■■□□□ 1.52
PDLIM7-209ENST00000503346 PKD1L3Q7Z443 1732 aa24.55■■□□□ 1.52
PDLIM7-209ENST00000503346 KCNQ2O43526 872 aa24.55■■□□□ 1.52
PDLIM7-209ENST00000503346 RALBP1Q15311 655 aa24.54■■□□□ 1.52
PDLIM7-209ENST00000503346 PLSCR1O15162 318 aa24.53■■□□□ 1.52
PDLIM7-209ENST00000503346 EZH2Q15910 746 aaKnown RBP24.53■■□□□ 1.52
PDLIM7-209ENST00000503346 NHSQ6T4R5 1651 aa24.53■■□□□ 1.52
PDLIM7-209ENST00000503346 NKX1-1Q15270 411 aaPredicted RBP24.52■■□□□ 1.52
PDLIM7-209ENST00000503346 AMOTQ4VCS5 1084 aa24.51■■□□□ 1.51
PDLIM7-209ENST00000503346 PLEKHO1Q53GL0 409 aaPredicted RBP24.51■■□□□ 1.51
PDLIM7-209ENST00000503346 IFNL2Q8IZJ0 200 aa24.5■■□□□ 1.51
PDLIM7-209ENST00000503346 HMOX1P09601 288 aa24.49■■□□□ 1.51
PDLIM7-209ENST00000503346 PHKG2P15735 406 aa24.49■■□□□ 1.51
PDLIM7-209ENST00000503346 PRIM1P49642 420 aaKnown RBP24.49■■□□□ 1.51
PDLIM7-209ENST00000503346 U2SURPO15042 1029 aaKnown RBP24.48■■□□□ 1.51
PDLIM7-209ENST00000503346 NUDCQ9Y266 331 aa24.47■■□□□ 1.51
PDLIM7-209ENST00000503346 RGPD3A6NKT7 1758 aaPredicted RBP24.45■■□□□ 1.5
PDLIM7-209ENST00000503346 RGPD4Q7Z3J3 1758 aa24.45■■□□□ 1.5
PDLIM7-209ENST00000503346 SYTL4Q96C24 671 aaPredicted RBP24.45■■□□□ 1.5
PDLIM7-209ENST00000503346 DOT1LQ8TEK3 1739 aa24.44■■□□□ 1.5
PDLIM7-209ENST00000503346 ZNF530Q6P9A1 599 aaPredicted RBP24.44■■□□□ 1.5
PDLIM7-209ENST00000503346 MYBBP1AQ9BQG0 1328 aaKnown RBP24.43■■□□□ 1.5
PDLIM7-209ENST00000503346 HSP90AB1P08238 724 aaKnown RBP24.43■■□□□ 1.5
PDLIM7-209ENST00000503346 PROM2Q8N271 834 aa24.43■■□□□ 1.5
PDLIM7-209ENST00000503346 PRKRIP1Q9H875 184 aaPredicted RBP24.42■■□□□ 1.5
PDLIM7-209ENST00000503346 RREB1Q92766 1687 aa24.41■■□□□ 1.5
PDLIM7-209ENST00000503346 TXNRD1Q16881 649 aa24.4■■□□□ 1.5
PDLIM7-209ENST00000503346 C1orf141Q5JVX7 400 aa24.4■■□□□ 1.5
PDLIM7-209ENST00000503346 DCAF5Q96JK2 942 aa24.4■■□□□ 1.5
PDLIM7-209ENST00000503346 BTAF1O14981 1849 aa24.4■■□□□ 1.5
PDLIM7-209ENST00000503346 U2AF1L5P0DN76 240 aaPredicted RBP24.39■■□□□ 1.49
PDLIM7-209ENST00000503346 U2AF1Q01081 240 aaKnown RBP eCLIP24.39■■□□□ 1.494e-6■■□□□ 12.1
PDLIM7-209ENST00000503346 RSPH6AQ9H0K4 717 aa24.39■■□□□ 1.49
PDLIM7-209ENST00000503346 AKAP4Q5JQC9 854 aa24.38■■□□□ 1.49
PDLIM7-209ENST00000503346 TOGARAM1Q9Y4F4 1720 aa24.38■■□□□ 1.49
PDLIM7-209ENST00000503346 MTHFSDQ2M296 383 aaKnown RBP24.37■■□□□ 1.49
PDLIM7-209ENST00000503346 MPRIPQ6WCQ1 1025 aa24.37■■□□□ 1.49
PDLIM7-209ENST00000503346 KDM6AO15550 1401 aaPredicted RBP24.36■■□□□ 1.49
PDLIM7-209ENST00000503346 ERVV-2B6SEH9 535 aa24.36■■□□□ 1.49
PDLIM7-209ENST00000503346 FCHSD2O94868 740 aa24.36■■□□□ 1.49
PDLIM7-209ENST00000503346 PIGBQ92521 554 aa24.36■■□□□ 1.49
PDLIM7-209ENST00000503346 NUP188Q5SRE5 1749 aa24.35■■□□□ 1.49
PDLIM7-209ENST00000503346 PRKAR2BP31323 418 aa24.35■■□□□ 1.49
PDLIM7-209ENST00000503346 NBPF14Q5TI25 921 aa24.35■■□□□ 1.49
PDLIM7-209ENST00000503346 SLC27A3Q5K4L6 730 aa24.34■■□□□ 1.49
PDLIM7-209ENST00000503346 TMOD3Q9NYL9 352 aa24.34■■□□□ 1.49
PDLIM7-209ENST00000503346 GAS2L2Q8NHY3 880 aa24.33■■□□□ 1.49
PDLIM7-209ENST00000503346 KAT6BQ8WYB5 2073 aa24.31■■□□□ 1.48
PDLIM7-209ENST00000503346 SMARCC1Q92922 1105 aaPredicted RBP24.31■■□□□ 1.48
PDLIM7-209ENST00000503346 PHACTR3Q96KR7 559 aa24.31■■□□□ 1.48
PDLIM7-209ENST00000503346 LRRC4BQ9NT99 713 aa24.31■■□□□ 1.48
PDLIM7-209ENST00000503346 R3HDM1Q15032 1099 aaKnown RBP24.3■■□□□ 1.48
PDLIM7-209ENST00000503346 ANO8Q9HCE9 1232 aaPredicted RBP24.3■■□□□ 1.48
PDLIM7-209ENST00000503346 PALLDQ8WX93 1383 aa24.29■■□□□ 1.48
PDLIM7-209ENST00000503346 PSDA5PKW4 1024 aaPredicted RBP24.29■■□□□ 1.48
PDLIM7-209ENST00000503346 CABP4P57796 275 aa24.29■■□□□ 1.48
PDLIM7-209ENST00000503346 ITGB4P16144 1822 aa24.28■■□□□ 1.48
PDLIM7-209ENST00000503346 RNMTO43148 476 aaKnown RBP24.27■■□□□ 1.48
PDLIM7-209ENST00000503346 LGR6Q9HBX8 967 aa24.27■■□□□ 1.48
PDLIM7-209ENST00000503346 CCNL1Q9UK58 526 aaPredicted RBP24.27■■□□□ 1.48
PDLIM7-209ENST00000503346 MAP3K5Q99683 1374 aa24.27■■□□□ 1.48
PDLIM7-209ENST00000503346 ATG3Q9NT62 314 aa24.26■■□□□ 1.47
PDLIM7-209ENST00000503346 ASAP1Q9ULH1 1129 aa24.26■■□□□ 1.47
PDLIM7-209ENST00000503346 LY75O60449 1722 aa24.26■■□□□ 1.47
PDLIM7-209ENST00000503346 PAPPAQ13219 1627 aa24.25■■□□□ 1.47
PDLIM7-209ENST00000503346 GNAT3A8MTJ3 354 aa24.25■■□□□ 1.47
PDLIM7-209ENST00000503346 PLEKHF1Q96S99 279 aa24.25■■□□□ 1.47
PDLIM7-209ENST00000503346 STK32BQ9NY57 414 aa24.25■■□□□ 1.47
PDLIM7-209ENST00000503346 SLC15A2Q16348 729 aa24.24■■□□□ 1.47
PDLIM7-209ENST00000503346 NFATC2IPQ8NCF5 419 aa24.24■■□□□ 1.47
PDLIM7-209ENST00000503346 PNNQ9H307 717 aaKnown RBP24.24■■□□□ 1.47
PDLIM7-209ENST00000503346 SLC52A2Q9HAB3 445 aa24.24■■□□□ 1.47
PDLIM7-209ENST00000503346 MRC1P22897 1456 aa24.24■■□□□ 1.47
PDLIM7-209ENST00000503346 ADAMTS7Q9UKP4 1686 aa24.24■■□□□ 1.47
PDLIM7-209ENST00000503346 KCNQ4P56696 695 aa24.23■■□□□ 1.47
PDLIM7-209ENST00000503346 ANP32CO43423 234 aa24.22■■□□□ 1.47
PDLIM7-209ENST00000503346 NEFMP07197 916 aa24.22■■□□□ 1.47
PDLIM7-209ENST00000503346 HMGB2P26583 209 aaKnown RBP24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms