RNA–Protein interactions for RNA: ENST00000503324.1

SMAD1-204, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-204ENST00000503324 AEBP1Q8IUX7 1158 aa23.92■■□□□ 1.42
SMAD1-204ENST00000503324 KDRP35968 1356 aa23.91■■□□□ 1.42
SMAD1-204ENST00000503324 PKD1L3Q7Z443 1732 aa23.91■■□□□ 1.42
SMAD1-204ENST00000503324 CCDC125Q86Z20 511 aa23.91■■□□□ 1.42
SMAD1-204ENST00000503324 SULT6B1Q6IMI4 303 aa23.89■■□□□ 1.41
SMAD1-204ENST00000503324 CFAP53Q96M91 514 aa23.89■■□□□ 1.41
SMAD1-204ENST00000503324 PLEKHG2Q9H7P9 1386 aa23.89■■□□□ 1.41
SMAD1-204ENST00000503324 TNS1Q9HBL0 1735 aaKnown RBP23.88■■□□□ 1.41
SMAD1-204ENST00000503324 TRIM37O94972 964 aa23.88■■□□□ 1.41
SMAD1-204ENST00000503324 DDX54Q8TDD1 881 aaKnown RBP23.88■■□□□ 1.41
SMAD1-204ENST00000503324 SBF2Q86WG5 1849 aa23.88■■□□□ 1.41
SMAD1-204ENST00000503324 PRKRIP1Q9H875 184 aaPredicted RBP23.87■■□□□ 1.41
SMAD1-204ENST00000503324 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.86■■□□□ 1.41
SMAD1-204ENST00000503324 CYP27B1O15528 508 aa23.85■■□□□ 1.41
SMAD1-204ENST00000503324 MYBBP1AQ9BQG0 1328 aaKnown RBP23.84■■□□□ 1.41
SMAD1-204ENST00000503324 PCDH11XQ9BZA7 1347 aa23.84■■□□□ 1.41
SMAD1-204ENST00000503324 PCDH11YQ9BZA8 1340 aa23.84■■□□□ 1.41
SMAD1-204ENST00000503324 HMOX1P09601 288 aa23.83■■□□□ 1.41
SMAD1-204ENST00000503324 PTF1AQ7RTS3 328 aa23.83■■□□□ 1.41
SMAD1-204ENST00000503324 SPG7Q9UQ90 795 aa23.83■■□□□ 1.41
SMAD1-204ENST00000503324 U2SURPO15042 1029 aaKnown RBP23.82■■□□□ 1.4
SMAD1-204ENST00000503324 NHSQ6T4R5 1651 aa23.81■■□□□ 1.4
SMAD1-204ENST00000503324 SF3B2Q13435 895 aaKnown RBP23.81■■□□□ 1.4
SMAD1-204ENST00000503324 DEFB132Q7Z7B7 95 aa23.81■■□□□ 1.4
SMAD1-204ENST00000503324 BCL11BQ9C0K0 894 aaPredicted RBP23.81■■□□□ 1.4
SMAD1-204ENST00000503324 KCNQ2O43526 872 aa23.8■■□□□ 1.4
SMAD1-204ENST00000503324 ACSBG1Q96GR2 724 aa23.8■■□□□ 1.4
SMAD1-204ENST00000503324 NUDCQ9Y266 331 aa23.79■■□□□ 1.4
SMAD1-204ENST00000503324 PHKG2P15735 406 aa23.78■■□□□ 1.4
SMAD1-204ENST00000503324 NKX1-1Q15270 411 aaPredicted RBP23.78■■□□□ 1.4
SMAD1-204ENST00000503324 AMOTQ4VCS5 1084 aa23.78■■□□□ 1.4
SMAD1-204ENST00000503324 PLEKHO1Q53GL0 409 aaPredicted RBP23.78■■□□□ 1.4
SMAD1-204ENST00000503324 DOT1LQ8TEK3 1739 aa23.78■■□□□ 1.4
SMAD1-204ENST00000503324 BAG6P46379 1132 aa23.77■■□□□ 1.4
SMAD1-204ENST00000503324 APBA3O96018 575 aa23.76■■□□□ 1.39
SMAD1-204ENST00000503324 IFNL2Q8IZJ0 200 aa23.76■■□□□ 1.39
SMAD1-204ENST00000503324 RSPH6AQ9H0K4 717 aa23.76■■□□□ 1.39
SMAD1-204ENST00000503324 TOGARAM1Q9Y4F4 1720 aa23.76■■□□□ 1.39
SMAD1-204ENST00000503324 U2AF1L5P0DN76 240 aaPredicted RBP23.75■■□□□ 1.39
SMAD1-204ENST00000503324 U2AF1Q01081 240 aaKnown RBP eCLIP23.75■■□□□ 1.39
SMAD1-204ENST00000503324 EN1Q05925 392 aaPredicted RBP23.75■■□□□ 1.39
SMAD1-204ENST00000503324 ZNF530Q6P9A1 599 aaPredicted RBP23.74■■□□□ 1.39
SMAD1-204ENST00000503324 PRIM1P49642 420 aaKnown RBP23.73■■□□□ 1.39
SMAD1-204ENST00000503324 CAMKK2Q96RR4 588 aa23.73■■□□□ 1.39
SMAD1-204ENST00000503324 BTAF1O14981 1849 aa23.71■■□□□ 1.39
SMAD1-204ENST00000503324 PRKAR2BP31323 418 aa23.71■■□□□ 1.39
SMAD1-204ENST00000503324 MTHFSDQ2M296 383 aaKnown RBP23.71■■□□□ 1.39
SMAD1-204ENST00000503324 RGPD3A6NKT7 1758 aaPredicted RBP23.7■■□□□ 1.39
SMAD1-204ENST00000503324 RGPD4Q7Z3J3 1758 aa23.7■■□□□ 1.39
SMAD1-204ENST00000503324 PLSCR1O15162 318 aa23.7■■□□□ 1.38
SMAD1-204ENST00000503324 FCHSD2O94868 740 aa23.7■■□□□ 1.38
SMAD1-204ENST00000503324 EZH2Q15910 746 aaKnown RBP23.7■■□□□ 1.38
SMAD1-204ENST00000503324 KDM6AO15550 1401 aaPredicted RBP23.69■■□□□ 1.38
SMAD1-204ENST00000503324 SYTL4Q96C24 671 aaPredicted RBP23.69■■□□□ 1.38
SMAD1-204ENST00000503324 PHACTR3Q96KR7 559 aa23.69■■□□□ 1.38
SMAD1-204ENST00000503324 ANP32CO43423 234 aa23.68■■□□□ 1.38
SMAD1-204ENST00000503324 KAT6BQ8WYB5 2073 aa23.68■■□□□ 1.38
SMAD1-204ENST00000503324 RREB1Q92766 1687 aa23.67■■□□□ 1.38
SMAD1-204ENST00000503324 HSP90AB1P08238 724 aaKnown RBP23.67■■□□□ 1.38
SMAD1-204ENST00000503324 AKAP4Q5JQC9 854 aa23.67■■□□□ 1.38
SMAD1-204ENST00000503324 C1orf141Q5JVX7 400 aa23.67■■□□□ 1.38
SMAD1-204ENST00000503324 ITGB4P16144 1822 aa23.66■■□□□ 1.38
SMAD1-204ENST00000503324 DCAF5Q96JK2 942 aa23.66■■□□□ 1.38
SMAD1-204ENST00000503324 PROM2Q8N271 834 aa23.65■■□□□ 1.38
SMAD1-204ENST00000503324 CCDC184Q52MB2 194 aa23.64■■□□□ 1.37
SMAD1-204ENST00000503324 MPRIPQ6WCQ1 1025 aa23.64■■□□□ 1.37
SMAD1-204ENST00000503324 PLEKHF1Q96S99 279 aa23.64■■□□□ 1.37
SMAD1-204ENST00000503324 GAS2L2Q8NHY3 880 aa23.63■■□□□ 1.37
SMAD1-204ENST00000503324 PIGBQ92521 554 aa23.63■■□□□ 1.37
SMAD1-204ENST00000503324 ADAMTS7Q9UKP4 1686 aa23.63■■□□□ 1.37
SMAD1-204ENST00000503324 ERVV-2B6SEH9 535 aa23.62■■□□□ 1.37
SMAD1-204ENST00000503324 SCN11AQ9UI33 1791 aa23.62■■□□□ 1.37
SMAD1-204ENST00000503324 NUP188Q5SRE5 1749 aa23.62■■□□□ 1.37
SMAD1-204ENST00000503324 TXNRD1Q16881 649 aa23.6■■□□□ 1.37
SMAD1-204ENST00000503324 LGR6Q9HBX8 967 aa23.6■■□□□ 1.37
SMAD1-204ENST00000503324 MAP3K5Q99683 1374 aa23.6■■□□□ 1.37
SMAD1-204ENST00000503324 RNMTO43148 476 aaKnown RBP23.59■■□□□ 1.37
SMAD1-204ENST00000503324 TMOD3Q9NYL9 352 aa23.59■■□□□ 1.37
SMAD1-204ENST00000503324 LY75O60449 1722 aa23.59■■□□□ 1.37
SMAD1-204ENST00000503324 MRC1P22897 1456 aa23.58■■□□□ 1.37
SMAD1-204ENST00000503324 GNAT3A8MTJ3 354 aa23.57■■□□□ 1.36
SMAD1-204ENST00000503324 WDR43Q15061 677 aaKnown RBP eCLIP23.57■■□□□ 1.36
SMAD1-204ENST00000503324 ADAMTS8Q9UP79 889 aa23.57■■□□□ 1.36
SMAD1-204ENST00000503324 VIRMAQ69YN4 1812 aaKnown RBP23.56■■□□□ 1.36
SMAD1-204ENST00000503324 CABP4P57796 275 aa23.56■■□□□ 1.36
SMAD1-204ENST00000503324 PNNQ9H307 717 aaKnown RBP23.56■■□□□ 1.36
SMAD1-204ENST00000503324 PALLDQ8WX93 1383 aa23.55■■□□□ 1.36
SMAD1-204ENST00000503324 IL17REQ8NFR9 667 aa23.55■■□□□ 1.36
SMAD1-204ENST00000503324 LRRC4BQ9NT99 713 aa23.55■■□□□ 1.36
SMAD1-204ENST00000503324 NFATC2IPQ8NCF5 419 aa23.54■■□□□ 1.36
SMAD1-204ENST00000503324 SLC52A2Q9HAB3 445 aa23.54■■□□□ 1.36
SMAD1-204ENST00000503324 ATG3Q9NT62 314 aa23.54■■□□□ 1.36
SMAD1-204ENST00000503324 ASAP1Q9ULH1 1129 aa23.54■■□□□ 1.36
SMAD1-204ENST00000503324 PAPPAQ13219 1627 aa23.53■■□□□ 1.36
SMAD1-204ENST00000503324 SMARCC1Q92922 1105 aaPredicted RBP23.53■■□□□ 1.36
SMAD1-204ENST00000503324 CEMIPQ8WUJ3 1361 aa23.52■■□□□ 1.36
SMAD1-204ENST00000503324 NEFMP07197 916 aa23.52■■□□□ 1.36
SMAD1-204ENST00000503324 SLC27A3Q5K4L6 730 aa23.52■■□□□ 1.36
SMAD1-204ENST00000503324 MRS2Q9HD23 443 aa23.52■■□□□ 1.36
SMAD1-204ENST00000503324 MAPK8IP3Q9UPT6 1336 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms